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Started by upstream project "BIOFORMATS-test-repo" build number 129 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins8320460035560733420.sh + '[' biorad = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_20273_merge_ci -v /uod/idr/repos/curated/biorad:/data -v /uod/idr-scratch/merge-ci/curated/biorad:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 14:42:43,894 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 14:42:43,895 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 14:42:43,895 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 14:42:43,896 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 14:42:43,897 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 14:42:43,897 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 14:42:43,897 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 14:42:43,897 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 14:42:43,898 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 14:42:43,898 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 14:42:43,898 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 14:42:43,898 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 14:42:44,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 14:42:44,123 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 14:42:44,150 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 14:42:44,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 14:42:44,159 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 14:42:44,159 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 14:42:44,159 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 14:42:44,159 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 14:42:44,159 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 14:42:44,160 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 14:42:44,160 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 263 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-22 14:42:44,170] [main] java.version = 1.8.0_342 [testng] 14:42:44,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 14:42:44,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:42:44,219 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-22_14-42-44.log] [testng] 14:42:44,221 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-22 14:42:44,223] [main] testng.directory = /data [testng] [2024-07-22 14:42:44,223] [main] testng.configDirectory = /config [testng] [2024-07-22 14:42:44,235] [main] testng.multiplier = 1.0 [testng] [2024-07-22 14:42:44,235] [main] testng.in-memory = false [testng] [2024-07-22 14:42:44,235] [main] testng.allow-missing = false [testng] [2024-07-22 14:42:44,235] [main] user.language = fr [testng] [2024-07-22 14:42:44,236] [main] user.country = FR [testng] [2024-07-22 14:42:44,236] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-22 14:42:47,516] [main] ---------------------------------------- [testng] [2024-07-22 14:42:47,516] [main] Total files: 467 [testng] [2024-07-22 14:42:47,516] [main] Scan time: 3.28 s (7 ms/file) [testng] [2024-07-22 14:42:47,516] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 111 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-22 14:43:02,062] [pool-1-thread-1] Initializing /data/jayne/N2A_021002/n2301.pic: [testng] 14:43:02,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 14:43:02,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,064 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-22_14-43-02.log] [testng] 14:43:02,064 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e0e3d6f - End of configuration. [testng] [2024-07-22 14:43:02,104] [pool-1-thread-12] Initializing /data/brian/2channel_time/2channel_time_raw01.pic: [testng] 14:43:02,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 14:43:02,105 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-22_14-43-02.log] [testng] 14:43:02,106 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18b516c3 - End of configuration. [testng] [2024-07-22 14:43:02,130] [pool-1-thread-11] Initializing /data/curtis/images.tif: [testng] 14:43:02,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 14:43:02,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-22_14-43-02.log] [testng] 14:43:02,131 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7bbad04c - End of configuration. [testng] [2024-07-22 14:43:02,155] [pool-1-thread-10] Initializing /data/misc/SPB12.PIC: [testng] 14:43:02,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 14:43:02,155 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,156 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-22_14-43-02.log] [testng] 14:43:02,156 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d4e59b5 - End of configuration. [testng] [2024-07-22 14:43:02,170] [pool-1-thread-9] Initializing /data/jayne/N2B_091202/n2201.pic: [testng] 14:43:02,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 14:43:02,170 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,171 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-22_14-43-02.log] [testng] 14:43:02,171 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d292005 - End of configuration. [testng] [2024-07-22 14:43:02,198] [pool-1-thread-8] Initializing /data/leah/1_1600_1_3/1_1600_1_3_raw01.pic: [testng] 14:43:02,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 14:43:02,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,199 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-22_14-43-02.log] [testng] 14:43:02,199 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39d6e9a6 - End of configuration. [testng] [2024-07-22 14:43:02,229] [pool-1-thread-7] Initializing /data/koen/nd4/nd400102.pic: [testng] 14:43:02,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 14:43:02,230 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,231 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-22_14-43-02.log] [testng] 14:43:02,231 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47386476 - End of configuration. [testng] [2024-07-22 14:43:02,259] [pool-1-thread-6] Initializing /data/jayne/N2C_021302_pt1/n2201.pic: [testng] 14:43:02,260 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 14:43:02,260 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,260 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-22_14-43-02.log] [testng] 14:43:02,261 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67130adf - End of configuration. [testng] [2024-07-22 14:43:02,301] [pool-1-thread-5] Initializing /data/glen/Ghm9-11-2004-6µm/Ghm9-11-2004-13_raw01.pic: [testng] 14:43:02,301 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 14:43:02,301 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,301 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-22_14-43-02.log] [testng] 14:43:02,302 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ef3a38c - End of configuration. [testng] [2024-07-22 14:43:02,329] [pool-1-thread-4] Initializing /data/misc/TST00301.PIC: [testng] 14:43:02,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 14:43:02,329 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,330 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-22_14-43-02.log] [testng] 14:43:02,331 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a54e469 - End of configuration. [testng] [2024-07-22 14:43:02,348] [pool-1-thread-3] Initializing /data/pang/lasersharp test/testseqc7z5t0/testseqc7z5t0_raw01.pic: [testng] 14:43:02,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 14:43:02,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,349 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-22_14-43-02.log] [testng] 14:43:02,350 |-INFO in ch.qos.logback.core.sift.SiftProcessor@428a1dd3 - End of configuration. [testng] [2024-07-22 14:43:02,374] [pool-1-thread-2] Initializing /data/koen/nt401.pic: [testng] 14:43:02,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 14:43:02,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:43:02,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-22_14-43-02.log] [testng] 14:43:02,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@50dde41d - End of configuration. [testng] [2024-07-22 14:43:02,929] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:02,958] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:02,965] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:02,975] [pool-1-thread-5] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:03,913] [pool-1-thread-3] Initializing /data/brian/GFPonlyfrap_1/GFPonlyfrap_1_raw.pic: [testng] [2024-07-22 14:43:03,936] [pool-1-thread-11] Initializing /data/billm/musmus1.pic: [testng] [2024-07-22 14:43:03,955] [pool-1-thread-10] Initializing /data/keck/CRG401.PIC: [testng] [2024-07-22 14:43:03,976] [pool-1-thread-4] Initializing /data/dennis/his301.pic: [testng] [2024-07-22 14:43:03,998] [pool-1-thread-12] Initializing /data/pang/lasersharp test/testseqc3z5t2k6/testseqc3z5t2k6_raw00101.pic: [testng] [2024-07-22 14:43:04,014] [pool-1-thread-2] Initializing /data/misc/SPC5.PIC: [testng] [2024-07-22 14:43:04,025] [pool-1-thread-9] Initializing /data/samples/PIF55_s1_1_raw01.pic: [testng] [2024-07-22 14:43:04,044] [pool-1-thread-8] Initializing /data/misc/TST00202.PIC: [testng] [2024-07-22 14:43:04,060] [pool-1-thread-1] Initializing /data/jae/test.PIC: [testng] [2024-07-22 14:43:04,084] [pool-1-thread-6] Initializing /data/misc/SPC7.PIC: [testng] [2024-07-22 14:43:04,098] [pool-1-thread-5] Initializing /data/misc/SPB17.PIC: [testng] [2024-07-22 14:43:04,503] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:04,548] [pool-1-thread-2] Initializing /data/brian/GFPonlyfrap_6_fast/GFPonlyfrap_6_fast_raw.pic: [testng] [2024-07-22 14:43:04,576] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:04,609] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:04,633] [pool-1-thread-6] Initializing /data/jae/SQZ20.PIC: [testng] [2024-07-22 14:43:04,659] [pool-1-thread-5] Initializing /data/misc/800102.pic: [testng] [2024-07-22 14:43:04,699] [pool-1-thread-1] Initializing /data/brian/2channels_stack_time/2channels_stack_time_raw00101.pic: [testng] [2024-07-22 14:43:04,795] [pool-1-thread-3] Initializing /data/curtis/worst1.pic: [testng] [2024-07-22 14:43:04,812] [pool-1-thread-12] Initializing /data/billm/musmus1.mov: [testng] [2024-07-22 14:43:04,918] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:04,924] [pool-1-thread-8] Initializing /data/pang/lasersharp test/testseqc7z5t2/testseqc7z5t2_raw00101.pic: [testng] [2024-07-22 14:43:04,949] [pool-1-thread-4] Initializing /data/jayne/N2C_021302_pt1/n2101.pic: [testng] [2024-07-22 14:43:04,973] [pool-1-thread-11] Initializing /data/misc/SPB11.PIC: [testng] [2024-07-22 14:43:04,986] [pool-1-thread-10] Initializing /data/keck/GFP501.PIC: [testng] [2024-07-22 14:43:05,008] [pool-1-thread-9] Initializing /data/brian/1channel_stack/1channel_stack_raw.pic: [testng] [2024-07-22 14:43:05,145] [pool-1-thread-3] Initializing /data/misc/SPB7.PIC: [testng] [2024-07-22 14:43:05,234] [pool-1-thread-2] Initializing /data/misc/SPC1.PIC: [testng] [2024-07-22 14:43:05,309] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:05,346] [pool-1-thread-12] Initializing /data/brian/GFPonlyfrap_3/GFPonlyfrap_3_raw.pic: [testng] [2024-07-22 14:43:05,367] [pool-1-thread-6] Initializing /data/misc/SPB8.PIC: [testng] [2024-07-22 14:43:05,413] [pool-1-thread-11] Initializing /data/misc/TST00201.PIC: [testng] [2024-07-22 14:43:05,446] [pool-1-thread-4] Initializing /data/patti/pzipe.pic: [testng] [2024-07-22 14:43:05,507] [pool-1-thread-3] Initializing /data/misc/SPB13.PIC: [testng] [2024-07-22 14:43:05,541] [pool-1-thread-9] Initializing /data/jayne/N2D_021302_pt2/n2301.pic: [testng] [2024-07-22 14:43:05,565] [pool-1-thread-10] Initializing /data/jae/3ch.PIC: [testng] [2024-07-22 14:43:05,638] [pool-1-thread-2] Initializing /data/curtis/worse1.pic: [testng] [2024-07-22 14:43:05,720] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:05,758] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:05,837] [pool-1-thread-6] Initializing /data/brian/spec8_28_9_05/spec8_28_9_05_raw01.pic: [testng] [2024-07-22 14:43:05,917] [pool-1-thread-8] Initializing /data/glen/Ver 4.3/BGRN.PIC: [testng] [2024-07-22 14:43:05,931] [pool-1-thread-3] Initializing /data/misc/SPC2.PIC: [testng] [2024-07-22 14:43:05,943] [pool-1-thread-4] Initializing /data/brian/Yun_dapi_1/Yun_dapi_1_raw01.pic: [testng] [2024-07-22 14:43:05,962] [pool-1-thread-2] Initializing /data/misc/SPC8.PIC: [testng] [2024-07-22 14:43:05,984] [pool-1-thread-11] Initializing /data/misc/SPB3.PIC: [testng] [2024-07-22 14:43:06,020] [pool-1-thread-12] Initializing /data/koen/o4a/new00102.pic: [testng] [2024-07-22 14:43:06,092] [pool-1-thread-10] Initializing /data/misc/SPB15.PIC: [testng] [2024-07-22 14:43:06,164] [pool-1-thread-9] Initializing /data/keck/radiance/Experiment 1_raw01.pic: [testng] [2024-07-22 14:43:06,187] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:06,268] [pool-1-thread-3] Initializing /data/billm/musmus1.avi: [testng] [2024-07-22 14:43:06,338] [pool-1-thread-2] Initializing /data/brian/3channels_stack/3channels_stack_raw01.pic: [testng] [2024-07-22 14:43:06,366] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:06,397] [pool-1-thread-8] Initializing /data/misc/SPB5.PIC: [testng] [2024-07-22 14:43:06,420] [pool-1-thread-11] Initializing /data/misc/SPB4.PIC: [testng] [2024-07-22 14:43:06,494] [pool-1-thread-10] Initializing /data/brian/GFPonlyfrap_5/GFPonlyfrap_5_raw.pic: [testng] [2024-07-22 14:43:06,527] [pool-1-thread-6] Initializing /data/misc/SPB14.PIC: [testng] [2024-07-22 14:43:06,538] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:06,709] [pool-1-thread-8] Initializing /data/curtis/worse2.pic: [testng] [2024-07-22 14:43:06,722] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:06,743] [pool-1-thread-11] Initializing /data/misc/SPB9.PIC: [testng] [2024-07-22 14:43:06,760] [pool-1-thread-9] Initializing /data/misc/SPC13.PIC: [testng] [2024-07-22 14:43:06,772] [pool-1-thread-4] Initializing /data/misc/SPC15.PIC: [testng] [2024-07-22 14:43:06,788] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:06,797] [pool-1-thread-3] Initializing /data/glen/chromo1.pic: [testng] [2024-07-22 14:43:06,930] [pool-1-thread-6] Initializing /data/brian/colon2-z05-1/colon2-z05-1_raw.pic: [testng] [2024-07-22 14:43:06,998] [pool-1-thread-2] Initializing /data/melissa/hamc8.pic: [testng] [2024-07-22 14:43:07,025] [pool-1-thread-10] Initializing /data/samples/dub/dub.pattern: [testng] [2024-07-22 14:43:09,047] [pool-1-thread-4] Initializing /data/jayne/N2D_021302_pt2/n2401.pic: [testng] [2024-07-22 14:43:09,077] [pool-1-thread-8] Initializing /data/gabriel/M1C6.PIC: [testng] [2024-07-22 14:43:09,105] [pool-1-thread-3] Initializing /data/leah/1_1600_1_3/Projection/1_1600_1_3_PrjData.pic: [testng] [2024-07-22 14:43:09,124] [pool-1-thread-9] Initializing /data/brian/3channels_time/3channels_time_raw01.pic: [testng] [2024-07-22 14:43:09,143] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:09,144] [pool-1-thread-11] Initializing /data/melissa/hamb17.pic: [testng] [2024-07-22 14:43:09,286] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:09,408] [pool-1-thread-1] Initializing /data/misc/SPC14.PIC: [testng] [2024-07-22 14:43:09,506] [pool-1-thread-2] Initializing /data/brian/3channels_stack_time/3channels_stack_time_raw00101.pic: [testng] [2024-07-22 14:43:09,541] [pool-1-thread-8] Initializing /data/misc/SPC12.PIC: [testng] [2024-07-22 14:43:09,572] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:09,627] [pool-1-thread-4] Initializing /data/keck/Experiment 1_raw01.pic: [testng] [2024-07-22 14:43:09,649] [pool-1-thread-3] Initializing /data/misc/SPC4.PIC: [testng] [2024-07-22 14:43:09,665] [pool-1-thread-11] Initializing /data/brian/beads_hydro_x60_2p_nosels_dds_z02/beads_hydro_x60_2p_nosels_dds_z02_raw.pic: [testng] [2024-07-22 14:43:09,699] [pool-1-thread-6] Initializing /data/misc/SPB10.PIC: [testng] [2024-07-22 14:43:09,817] [pool-1-thread-1] Initializing /data/brian/GFPonlyfrap_2/GFPonlyfrap_2_raw.pic: [testng] [2024-07-22 14:43:09,859] [pool-1-thread-9] Initializing /data/glen/Ver 4.3/PEN60X01.PIC: [testng] [2024-07-22 14:43:09,963] [pool-1-thread-8] Initializing /data/misc/TST00102.PIC: [testng] [2024-07-22 14:43:10,075] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:10,087] [pool-1-thread-3] Initializing /data/brian/GFPonlyfrap_4/GFPonlyfrap_4_raw.pic: [testng] [2024-07-22 14:43:10,162] [pool-1-thread-6] Initializing /data/misc/SPC9.PIC: [testng] [2024-07-22 14:43:10,180] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:10,191] [pool-1-thread-4] Initializing /data/misc/TST00101.PIC: [testng] [2024-07-22 14:43:10,379] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:10,381] [pool-1-thread-1] Initializing /data/erica/2-4827_30/2-4827_30_raw.pic: [testng] [2024-07-22 14:43:10,436] [pool-1-thread-11] Initializing /data/misc/SPB2.PIC: [testng] [2024-07-22 14:43:10,517] [pool-1-thread-6] Initializing /data/misc/SPC11.PIC: [testng] [2024-07-22 14:43:10,533] [pool-1-thread-8] Initializing /data/chris/4C_tweek12;nSyb_PLC-PH-GFP_HRPstain.pic: [testng] [2024-07-22 14:43:10,568] [pool-1-thread-9] Initializing /data/chris/200907090/073108_SpEnsH2B_TSA15_01_raw01.pic: [testng] [2024-07-22 14:43:10,671] [pool-1-thread-3] Initializing /data/misc/SPB1.PIC: [testng] [2024-07-22 14:43:10,697] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:10,752] [pool-1-thread-4] Initializing /data/glen/Ghm9-11-2004-1/Ghm9-11-2004-1_raw.pic: [testng] [2024-07-22 14:43:10,833] [pool-1-thread-11] Initializing /data/brian/2channel_stack/2channel_stack_raw01.pic: [testng] [2024-07-22 14:43:10,891] [pool-1-thread-1] Initializing /data/brian/1channel_1z_time/1channel_1z_time_raw.pic: [testng] [2024-07-22 14:43:10,921] [pool-1-thread-6] Initializing /data/pang/lasersharp test/testseqc3z5t0k6/testseqc3z5t0k6_raw01.pic: [testng] [2024-07-22 14:43:11,030] [pool-1-thread-4] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:11,032] [pool-1-thread-3] Initializing /data/curtis/images.pic: [testng] [2024-07-22 14:43:11,165] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:11,169] [pool-1-thread-9] Initializing /data/misc/SPC10.PIC: [testng] [2024-07-22 14:43:11,186] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:11,199] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:11,218] [pool-1-thread-4] Initializing /data/misc/SPB6.PIC: [testng] [2024-07-22 14:43:11,239] [pool-1-thread-3] Initializing /data/misc/SPC6.PIC: [testng] [2024-07-22 14:43:11,253] [pool-1-thread-8] Initializing /data/brian/Yun_tr_1_raw02.pic: [testng] [2024-07-22 14:43:11,304] [pool-1-thread-6] Initializing /data/jayne/N2A_021002/n2201.pic: [testng] [2024-07-22 14:43:11,400] [pool-1-thread-1] Initializing /data/pang/lasersharp test/testsimc3z5t0k6/testsimc3z5t0k6_raw01.pic: [testng] [2024-07-22 14:43:11,414] [pool-1-thread-11] Initializing /data/misc/SPC3.PIC: [testng] [2024-07-22 14:43:11,557] [pool-1-thread-9] Initializing /data/misc/SPB16.PIC: [testng] [2024-07-22 14:43:11,577] [pool-1-thread-4] Initializing /data/misc/TST00302.PIC: [testng] [2024-07-22 14:43:11,664] [pool-1-thread-3] Initializing /data/brian/1channel_stack_time/1channel_stack_time_raw00101.pic: [testng] [2024-07-22 14:43:11,684] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:11,734] [pool-1-thread-11] Initializing /data/misc/SPC16.PIC: [testng] [2024-07-22 14:43:11,747] [pool-1-thread-6] Initializing /data/misc/SPC17.PIC: [testng] [2024-07-22 14:43:11,828] [pool-1-thread-1] Initializing /data/curtis/worst2.pic: [testng] [2024-07-22 14:43:11,920] [pool-1-thread-9] Initializing /data/jayne/N2A_021002/n2101.pic: [testng] [2024-07-22 14:43:11,954] [pool-1-thread-8] Initializing /data/jayne/N2B_091202/n2301.pic: [testng] [2024-07-22 14:43:13,369] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-22 14:43:14,134] [pool-1-thread-2] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5883, Failures: 30, Skips: 0 [testng] =============================================== [testng] [testng] The tests failed. BUILD FAILED /bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest Total time: 38 seconds Build step 'Execute shell' marked build as failure Finished: FAILURE