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Started by upstream project "BIOFORMATS-test-repo" build number 130 originally caused by: Started by upstream project "Trigger" build number 147 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins14457877176582192404.sh + '[' biorad = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_20437_merge_ci -v /uod/idr/repos/curated/biorad:/data -v /uod/idr-scratch/merge-ci/curated/biorad:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 12:06:14,647 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 12:06:14,649 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 12:06:14,649 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:06:14,650 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 12:06:14,650 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 12:06:14,651 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 12:06:14,651 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 12:06:14,651 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:06:14,651 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 12:06:14,652 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 12:06:14,652 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 12:06:14,652 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 12:06:14,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 12:06:14,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 12:06:14,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 12:06:14,847 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 12:06:14,852 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 12:06:14,853 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 12:06:14,853 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 12:06:14,853 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 12:06:14,854 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 12:06:14,854 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 12:06:14,854 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 203 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-23 12:06:14,863] [main] java.version = 11.0.16 [testng] 12:06:14,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 12:06:14,867 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:14,918 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-23_12-06-14.log] [testng] 12:06:14,920 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-07-23 12:06:14,922] [main] testng.directory = /data [testng] [2024-07-23 12:06:14,922] [main] testng.configDirectory = /config [testng] [2024-07-23 12:06:14,932] [main] testng.multiplier = 1.0 [testng] [2024-07-23 12:06:14,933] [main] testng.in-memory = false [testng] [2024-07-23 12:06:14,934] [main] testng.allow-missing = false [testng] [2024-07-23 12:06:14,934] [main] user.language = en [testng] [2024-07-23 12:06:14,934] [main] user.country = ${user.country} [testng] [2024-07-23 12:06:14,934] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-23 12:06:18,450] [main] ---------------------------------------- [testng] [2024-07-23 12:06:18,450] [main] Total files: 467 [testng] [2024-07-23 12:06:18,450] [main] Scan time: 3.516 s (7 ms/file) [testng] [2024-07-23 12:06:18,450] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 111 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-23 12:06:33,103] [pool-1-thread-1] Initializing /data/chris/200907090/073108_SpEnsH2B_TSA15_01_raw01.pic: [testng] 12:06:33,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 12:06:33,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,107 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-23_12-06-33.log] [testng] 12:06:33,107 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c71efd7 - End of configuration. [testng] [2024-07-23 12:06:33,146] [pool-1-thread-12] Initializing /data/misc/SPC4.PIC: [testng] 12:06:33,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 12:06:33,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,148 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-23_12-06-33.log] [testng] 12:06:33,148 |-INFO in ch.qos.logback.core.sift.SiftProcessor@34cafbb9 - End of configuration. [testng] [2024-07-23 12:06:33,166] [pool-1-thread-11] Initializing /data/brian/Yun_dapi_1/Yun_dapi_1_raw01.pic: [testng] 12:06:33,167 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 12:06:33,167 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,167 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-23_12-06-33.log] [testng] 12:06:33,168 |-INFO in ch.qos.logback.core.sift.SiftProcessor@238a7fa3 - End of configuration. [testng] [2024-07-23 12:06:33,196] [pool-1-thread-10] Initializing /data/jae/test.PIC: [testng] 12:06:33,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 12:06:33,196 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,197 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-23_12-06-33.log] [testng] 12:06:33,197 |-INFO in ch.qos.logback.core.sift.SiftProcessor@369ff5ed - End of configuration. [testng] [2024-07-23 12:06:33,222] [pool-1-thread-9] Initializing /data/brian/3channels_stack/3channels_stack_raw01.pic: [testng] 12:06:33,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 12:06:33,222 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,223 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-23_12-06-33.log] [testng] 12:06:33,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9c8979c - End of configuration. [testng] [2024-07-23 12:06:33,249] [pool-1-thread-8] Initializing /data/brian/beads_hydro_x60_2p_nosels_dds_z02/beads_hydro_x60_2p_nosels_dds_z02_raw.pic: [testng] 12:06:33,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 12:06:33,249 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,250 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-23_12-06-33.log] [testng] 12:06:33,250 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2cc52d5d - End of configuration. [testng] [2024-07-23 12:06:33,279] [pool-1-thread-7] Initializing /data/brian/colon2-z05-1/colon2-z05-1_raw.pic: [testng] 12:06:33,279 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 12:06:33,279 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,280 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-23_12-06-33.log] [testng] 12:06:33,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32b1b325 - End of configuration. [testng] [2024-07-23 12:06:33,307] [pool-1-thread-6] Initializing /data/brian/GFPonlyfrap_1/GFPonlyfrap_1_raw.pic: [testng] 12:06:33,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 12:06:33,307 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,308 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-23_12-06-33.log] [testng] 12:06:33,308 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54047901 - End of configuration. [testng] [2024-07-23 12:06:33,332] [pool-1-thread-5] Initializing /data/misc/SPB1.PIC: [testng] 12:06:33,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 12:06:33,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-23_12-06-33.log] [testng] 12:06:33,334 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47e7dc82 - End of configuration. [testng] [2024-07-23 12:06:33,349] [pool-1-thread-4] Initializing /data/koen/nd4/nd400102.pic: [testng] 12:06:33,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 12:06:33,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,350 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-23_12-06-33.log] [testng] 12:06:33,350 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56db8742 - End of configuration. [testng] [2024-07-23 12:06:33,386] [pool-1-thread-3] Initializing /data/billm/musmus1.avi: [testng] 12:06:33,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 12:06:33,386 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,387 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-23_12-06-33.log] [testng] 12:06:33,387 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f971596 - End of configuration. [testng] [2024-07-23 12:06:33,425] [pool-1-thread-2] Initializing /data/misc/800102.pic: [testng] 12:06:33,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 12:06:33,425 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 12:06:33,426 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-23_12-06-33.log] [testng] 12:06:33,427 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7667eb9e - End of configuration. [testng] [2024-07-23 12:06:33,989] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:33,997] [pool-1-thread-7] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:34,005] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:34,066] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:34,081] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:35,285] [pool-1-thread-3] Initializing /data/jayne/N2A_021002/n2101.pic: [testng] [2024-07-23 12:06:35,311] [pool-1-thread-5] Initializing /data/billm/musmus1.mov: [testng] [2024-07-23 12:06:35,327] [pool-1-thread-12] Initializing /data/pang/lasersharp test/testsimc3z5t0k6/testsimc3z5t0k6_raw01.pic: [testng] [2024-07-23 12:06:35,346] [pool-1-thread-9] Initializing /data/patti/pzipe.pic: [testng] [2024-07-23 12:06:35,369] [pool-1-thread-6] Initializing /data/keck/radiance/Experiment 1_raw01.pic: [testng] [2024-07-23 12:06:35,395] [pool-1-thread-1] Initializing /data/keck/CRG401.PIC: [testng] [2024-07-23 12:06:35,417] [pool-1-thread-10] Initializing /data/erica/2-4827_30/2-4827_30_raw.pic: [testng] [2024-07-23 12:06:35,439] [pool-1-thread-8] Initializing /data/brian/2channels_stack_time/2channels_stack_time_raw00101.pic: [testng] [2024-07-23 12:06:35,463] [pool-1-thread-11] Initializing /data/misc/SPB14.PIC: [testng] [2024-07-23 12:06:35,476] [pool-1-thread-7] Initializing /data/curtis/images.tif: [testng] [2024-07-23 12:06:35,915] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:35,942] [pool-1-thread-5] Initializing /data/misc/TST00302.PIC: [testng] [2024-07-23 12:06:35,963] [pool-1-thread-11] Initializing /data/misc/TST00101.PIC: [testng] [2024-07-23 12:06:35,980] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:36,084] [pool-1-thread-6] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:36,153] [pool-1-thread-1] Initializing /data/brian/spec8_28_9_05/spec8_28_9_05_raw01.pic: [testng] [2024-07-23 12:06:36,182] [pool-1-thread-3] Initializing /data/keck/Experiment 1_raw01.pic: [testng] [2024-07-23 12:06:36,221] [pool-1-thread-9] Initializing /data/misc/SPC14.PIC: [testng] [2024-07-23 12:06:36,254] [pool-1-thread-12] Initializing /data/glen/Ghm9-11-2004-6µm/Ghm9-11-2004-13_raw01.pic: [testng] [2024-07-23 12:06:36,286] [pool-1-thread-7] Initializing /data/misc/SPC13.PIC: [testng] [2024-07-23 12:06:36,307] [pool-1-thread-10] Initializing /data/misc/SPC17.PIC: [testng] [2024-07-23 12:06:36,482] [pool-1-thread-6] Initializing /data/misc/TST00301.PIC: [testng] [2024-07-23 12:06:36,610] [pool-1-thread-5] Initializing /data/gabriel/M1C6.PIC: [testng] [2024-07-23 12:06:36,631] [pool-1-thread-11] Initializing /data/misc/SPC5.PIC: [testng] [2024-07-23 12:06:36,784] [pool-1-thread-7] Initializing /data/samples/dub/dub.pattern: [testng] [2024-07-23 12:06:38,320] [pool-1-thread-9] Initializing /data/curtis/worst1.pic: [testng] [2024-07-23 12:06:38,330] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:38,331] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:38,342] [pool-1-thread-10] Initializing /data/misc/SPB15.PIC: [testng] [2024-07-23 12:06:38,390] [pool-1-thread-3] Initializing /data/misc/SPB6.PIC: [testng] [2024-07-23 12:06:38,519] [pool-1-thread-6] Initializing /data/dennis/his301.pic: [testng] [2024-07-23 12:06:38,554] [pool-1-thread-12] Initializing /data/misc/SPC7.PIC: [testng] [2024-07-23 12:06:38,602] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:38,662] [pool-1-thread-9] Initializing /data/pang/lasersharp test/testseqc3z5t0k6/testseqc3z5t0k6_raw01.pic: [testng] [2024-07-23 12:06:38,676] [pool-1-thread-5] Initializing /data/jayne/N2A_021002/n2201.pic: [testng] [2024-07-23 12:06:38,695] [pool-1-thread-10] Initializing /data/misc/SPC2.PIC: [testng] [2024-07-23 12:06:38,711] [pool-1-thread-11] Initializing /data/keck/GFP501.PIC: [testng] [2024-07-23 12:06:38,817] [pool-1-thread-1] Initializing /data/glen/Ghm9-11-2004-1/Ghm9-11-2004-1_raw.pic: [testng] [2024-07-23 12:06:38,848] [pool-1-thread-3] Initializing /data/misc/SPC16.PIC: [testng] [2024-07-23 12:06:38,916] [pool-1-thread-8] Initializing /data/brian/GFPonlyfrap_2/GFPonlyfrap_2_raw.pic: [testng] [2024-07-23 12:06:39,029] [pool-1-thread-12] Initializing /data/misc/TST00202.PIC: [testng] [2024-07-23 12:06:39,103] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:39,164] [pool-1-thread-10] Initializing /data/misc/SPB12.PIC: [testng] [2024-07-23 12:06:39,192] [pool-1-thread-6] Initializing /data/misc/SPC6.PIC: [testng] [2024-07-23 12:06:39,208] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:39,270] [pool-1-thread-9] Initializing /data/melissa/hamb17.pic: [testng] [2024-07-23 12:06:39,290] [pool-1-thread-11] Initializing /data/samples/PIF55_s1_1_raw01.pic: [testng] [2024-07-23 12:06:39,309] [pool-1-thread-5] Initializing /data/misc/SPB10.PIC: [testng] [2024-07-23 12:06:39,354] [pool-1-thread-3] Initializing /data/brian/GFPonlyfrap_6_fast/GFPonlyfrap_6_fast_raw.pic: [testng] [2024-07-23 12:06:39,397] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:39,439] [pool-1-thread-1] Initializing /data/misc/SPC15.PIC: [testng] [2024-07-23 12:06:39,628] [pool-1-thread-10] Initializing /data/brian/1channel_1z_time/1channel_1z_time_raw.pic: [testng] [2024-07-23 12:06:39,650] [pool-1-thread-12] Initializing /data/pang/lasersharp test/testseqc7z5t0/testseqc7z5t0_raw01.pic: [testng] [2024-07-23 12:06:39,698] [pool-1-thread-8] Initializing /data/jayne/N2C_021302_pt1/n2101.pic: [testng] [2024-07-23 12:06:39,729] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:39,743] [pool-1-thread-6] Initializing /data/koen/o4a/new00102.pic: [testng] [2024-07-23 12:06:39,792] [pool-1-thread-5] Initializing /data/misc/TST00102.PIC: [testng] [2024-07-23 12:06:39,845] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:39,879] [pool-1-thread-9] Initializing /data/brian/3channels_time/3channels_time_raw01.pic: [testng] [2024-07-23 12:06:39,956] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:39,974] [pool-1-thread-1] Initializing /data/curtis/worst2.pic: [testng] [2024-07-23 12:06:40,013] [pool-1-thread-3] Initializing /data/misc/SPB11.PIC: [testng] [2024-07-23 12:06:40,096] [pool-1-thread-11] Initializing /data/glen/Ver 4.3/PEN60X01.PIC: [testng] [2024-07-23 12:06:40,190] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:40,201] [pool-1-thread-10] Initializing /data/misc/SPB16.PIC: [testng] [2024-07-23 12:06:40,276] [pool-1-thread-8] Initializing /data/glen/Ver 4.3/BGRN.PIC: [testng] [2024-07-23 12:06:40,317] [pool-1-thread-5] Initializing /data/jayne/N2A_021002/n2301.pic: [testng] [2024-07-23 12:06:40,356] [pool-1-thread-12] Initializing /data/misc/SPB9.PIC: [testng] [2024-07-23 12:06:40,385] [pool-1-thread-1] Initializing /data/misc/SPB2.PIC: [testng] [2024-07-23 12:06:40,426] [pool-1-thread-9] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:40,481] [pool-1-thread-3] Initializing /data/koen/nt401.pic: [testng] [2024-07-23 12:06:40,655] [pool-1-thread-10] Initializing /data/misc/SPB5.PIC: [testng] [2024-07-23 12:06:40,667] [pool-1-thread-9] Initializing /data/brian/Yun_tr_1_raw02.pic: [testng] [2024-07-23 12:06:40,722] [pool-1-thread-8] Initializing /data/misc/SPB3.PIC: [testng] [2024-07-23 12:06:40,805] [pool-1-thread-12] Initializing /data/brian/GFPonlyfrap_5/GFPonlyfrap_5_raw.pic: [testng] [2024-07-23 12:06:40,844] [pool-1-thread-1] Initializing /data/curtis/images.pic: [testng] [2024-07-23 12:06:40,858] [pool-1-thread-11] Initializing /data/brian/GFPonlyfrap_4/GFPonlyfrap_4_raw.pic: [testng] [2024-07-23 12:06:40,894] [pool-1-thread-5] Initializing /data/jae/3ch.PIC: [testng] [2024-07-23 12:06:41,037] [pool-1-thread-3] Initializing /data/misc/SPB8.PIC: [testng] [2024-07-23 12:06:41,101] [pool-1-thread-8] Initializing /data/jayne/N2C_021302_pt1/n2201.pic: [testng] [2024-07-23 12:06:41,141] [pool-1-thread-10] Initializing /data/pang/lasersharp test/testseqc7z5t2/testseqc7z5t2_raw00101.pic: [testng] [2024-07-23 12:06:41,171] [pool-1-thread-1] Initializing /data/brian/GFPonlyfrap_3/GFPonlyfrap_3_raw.pic: [testng] [2024-07-23 12:06:41,209] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:41,214] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:41,325] [pool-1-thread-9] Initializing /data/misc/SPC12.PIC: [testng] [2024-07-23 12:06:41,349] [pool-1-thread-5] Initializing /data/billm/musmus1.pic: [testng] [2024-07-23 12:06:41,418] [pool-1-thread-11] Initializing /data/brian/2channel_time/2channel_time_raw01.pic: [testng] [2024-07-23 12:06:41,439] [pool-1-thread-12] Initializing /data/brian/1channel_stack_time/1channel_stack_time_raw00101.pic: [testng] [2024-07-23 12:06:41,489] [pool-1-thread-3] Initializing /data/misc/SPB7.PIC: [testng] [2024-07-23 12:06:41,506] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:41,587] [pool-1-thread-8] Initializing /data/chris/4C_tweek12;nSyb_PLC-PH-GFP_HRPstain.pic: [testng] [2024-07-23 12:06:41,697] [pool-1-thread-9] Initializing /data/glen/chromo1.pic: [testng] [2024-07-23 12:06:41,715] [pool-1-thread-1] Initializing /data/leah/1_1600_1_3/Projection/1_1600_1_3_PrjData.pic: [testng] [2024-07-23 12:06:41,858] [pool-1-thread-3] Initializing /data/misc/SPC1.PIC: [testng] [2024-07-23 12:06:41,876] [pool-1-thread-5] Initializing /data/misc/TST00201.PIC: [testng] [2024-07-23 12:06:41,898] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:41,989] [pool-1-thread-10] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:42,051] [pool-1-thread-9] Initializing /data/jayne/N2D_021302_pt2/n2301.pic: [testng] [2024-07-23 12:06:42,117] [pool-1-thread-10] Initializing /data/melissa/hamc8.pic: [testng] [2024-07-23 12:06:42,156] [pool-1-thread-1] Initializing /data/misc/SPB13.PIC: [testng] [2024-07-23 12:06:42,179] [pool-1-thread-11] Initializing /data/misc/SPC3.PIC: [testng] [2024-07-23 12:06:42,248] [pool-1-thread-3] Initializing /data/jayne/N2B_091202/n2301.pic: [testng] [2024-07-23 12:06:42,284] [pool-1-thread-8] Initializing /data/brian/2channel_stack/2channel_stack_raw01.pic: [testng] [2024-07-23 12:06:42,337] [pool-1-thread-5] Initializing /data/curtis/worse1.pic: [testng] [2024-07-23 12:06:42,499] [pool-1-thread-1] Initializing /data/misc/SPC11.PIC: [testng] [2024-07-23 12:06:42,532] [pool-1-thread-9] Initializing /data/misc/SPC8.PIC: [testng] [2024-07-23 12:06:42,554] [pool-1-thread-11] Initializing /data/misc/SPB17.PIC: [testng] [2024-07-23 12:06:42,588] [pool-1-thread-10] Initializing /data/misc/SPC10.PIC: [testng] [2024-07-23 12:06:42,644] [pool-1-thread-5] Initializing /data/misc/SPC9.PIC: [testng] [2024-07-23 12:06:42,710] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:42,736] [pool-1-thread-3] Initializing /data/jayne/N2B_091202/n2201.pic: [testng] [2024-07-23 12:06:42,887] [pool-1-thread-9] Initializing /data/jae/SQZ20.PIC: [testng] [2024-07-23 12:06:42,926] [pool-1-thread-1] Initializing /data/leah/1_1600_1_3/1_1600_1_3_raw01.pic: [testng] [2024-07-23 12:06:42,947] [pool-1-thread-8] Initializing /data/pang/lasersharp test/testseqc3z5t2k6/testseqc3z5t2k6_raw00101.pic: [testng] [2024-07-23 12:06:42,967] [pool-1-thread-11] Initializing /data/brian/1channel_stack/1channel_stack_raw.pic: [testng] [2024-07-23 12:06:42,997] [pool-1-thread-5] Initializing /data/curtis/worse2.pic: [testng] [2024-07-23 12:06:43,054] [pool-1-thread-10] Initializing /data/misc/SPB4.PIC: [testng] [2024-07-23 12:06:43,195] [pool-1-thread-12] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:43,245] [pool-1-thread-3] Initializing /data/brian/3channels_stack_time/3channels_stack_time_raw00101.pic: [testng] [2024-07-23 12:06:43,318] [pool-1-thread-11] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:43,350] [pool-1-thread-5] Initializing /data/jayne/N2D_021302_pt2/n2401.pic: [testng] [2024-07-23 12:06:43,423] [pool-1-thread-1] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:43,500] [pool-1-thread-8] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [2024-07-23 12:06:46,926] [pool-1-thread-3] testSaneUsedFiles: FAILED (Used files does not start with getCurrentFile) [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5883, Failures: 30, Skips: 0 [testng] =============================================== [testng] [testng] The tests failed. BUILD FAILED /bio-formats-build/bioformats/components/test-suite/build.xml:270: if=failedTest Total time: 40 seconds Build step 'Execute shell' marked build as failure Finished: FAILURE