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Started by upstream project "BIOFORMATS-test-repo" build number 135 originally caused by: Started by upstream project "Trigger" build number 155 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins18095813702931331992.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_21132_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:22:08,914 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:08,916 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:22:08,916 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:08,917 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:08,917 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:08,917 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:08,918 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:08,918 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:08,918 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:08,919 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:08,919 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:08,919 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:09,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:09,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:09,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:09,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:09,119 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:09,120 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:09,120 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:09,120 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:09,120 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:22:09,121 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:22:09,121 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 203 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-28 01:22:09,130] [main] java.version = 17.0.2 [testng] 01:22:09,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:09,134 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:09,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-28_01-22-09.log] [testng] 01:22:09,190 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-07-28 01:22:09,193] [main] testng.directory = /data [testng] [2024-07-28 01:22:09,193] [main] testng.configDirectory = /config [testng] [2024-07-28 01:22:09,205] [main] testng.multiplier = 1.0 [testng] [2024-07-28 01:22:09,206] [main] testng.in-memory = false [testng] [2024-07-28 01:22:09,207] [main] testng.allow-missing = false [testng] [2024-07-28 01:22:09,207] [main] user.language = en [testng] [2024-07-28 01:22:09,207] [main] user.country = ${user.country} [testng] [2024-07-28 01:22:09,207] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-28 01:22:10,163] [main] ---------------------------------------- [testng] [2024-07-28 01:22:10,163] [main] Total files: 103 [testng] [2024-07-28 01:22:10,163] [main] Scan time: 0.956 s (9 ms/file) [testng] [2024-07-28 01:22:10,163] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-28 01:22:17,374] [pool-1-thread-1] Initializing /data/chip/Nanogold-1.dm3: [testng] 01:22:17,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:22:17,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,375 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-28_01-22-17.log] [testng] 01:22:17,376 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48ae8b0e - End of configuration. [testng] [2024-07-28 01:22:17,399] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 01:22:17,399 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:22:17,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,401 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-28_01-22-17.log] [testng] 01:22:17,401 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b11a273 - End of configuration. [testng] [2024-07-28 01:22:17,415] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] 01:22:17,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:22:17,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-28_01-22-17.log] [testng] 01:22:17,417 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fc30979 - End of configuration. [testng] [2024-07-28 01:22:17,447] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] 01:22:17,447 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:22:17,448 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,448 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-28_01-22-17.log] [testng] 01:22:17,449 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1991c92e - End of configuration. [testng] [2024-07-28 01:22:17,462] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] 01:22:17,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:22:17,462 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,463 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-28_01-22-17.log] [testng] 01:22:17,463 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a50520 - End of configuration. [testng] [2024-07-28 01:22:17,476] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] 01:22:17,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:22:17,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,477 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-28_01-22-17.log] [testng] 01:22:17,477 |-INFO in ch.qos.logback.core.sift.SiftProcessor@158b0380 - End of configuration. [testng] [2024-07-28 01:22:17,489] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] 01:22:17,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:22:17,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,491 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-28_01-22-17.log] [testng] 01:22:17,491 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f4bd3f2 - End of configuration. [testng] [2024-07-28 01:22:17,507] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] 01:22:17,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:22:17,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,508 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-28_01-22-17.log] [testng] 01:22:17,509 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1a02f3df - End of configuration. [testng] [2024-07-28 01:22:17,578] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] 01:22:17,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:22:17,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,580 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-28_01-22-17.log] [testng] 01:22:17,581 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49e1efa8 - End of configuration. [testng] [2024-07-28 01:22:17,881] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] 01:22:17,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:22:17,881 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-28_01-22-17.log] [testng] 01:22:17,883 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dc69032 - End of configuration. [testng] [2024-07-28 01:22:17,899] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 01:22:17,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:22:17,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,900 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-28_01-22-17.log] [testng] 01:22:17,901 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51cffc54 - End of configuration. [testng] [2024-07-28 01:22:17,993] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 01:22:17,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:22:17,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:17,996 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-28_01-22-17.log] [testng] 01:22:17,996 |-INFO in ch.qos.logback.core.sift.SiftProcessor@120def1a - End of configuration. [testng] [2024-07-28 01:22:19,406] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-07-28 01:22:19,426] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-07-28 01:22:19,507] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-07-28 01:22:19,532] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3: [testng] [2024-07-28 01:22:19,923] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-07-28 01:22:19,939] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-07-28 01:22:20,626] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-07-28 01:22:20,724] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-07-28 01:22:20,838] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-07-28 01:22:21,022] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-07-28 01:22:21,270] [pool-1-thread-2] Initializing /data/jay/smallerfile.dm3: [testng] [2024-07-28 01:22:21,279] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-07-28 01:22:21,700] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-07-28 01:22:21,894] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-07-28 01:22:22,435] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-07-28 01:22:22,910] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-07-28 01:22:23,269] [pool-1-thread-8] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-07-28 01:22:23,451] [pool-1-thread-5] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-07-28 01:22:23,819] [pool-1-thread-7] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-07-28 01:22:23,917] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-07-28 01:22:24,505] [pool-1-thread-5] Initializing /data/jay/dnasample.tif: [testng] [2024-07-28 01:22:24,642] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-07-28 01:22:25,140] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-07-28 01:22:25,890] [pool-1-thread-1] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-07-28 01:22:25,997] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-07-28 01:22:26,276] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-07-28 01:22:27,165] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-07-28 01:22:28,177] [pool-1-thread-11] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-07-28 01:22:28,190] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-07-28 01:22:28,478] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-07-28 01:22:28,577] [pool-1-thread-9] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-07-28 01:22:28,687] [pool-1-thread-4] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-07-28 01:22:28,740] [pool-1-thread-7] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-07-28 01:22:28,959] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-07-28 01:22:29,110] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-07-28 01:22:29,152] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-07-28 01:22:31,012] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-07-28 01:22:31,995] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-07-28 01:22:32,354] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-07-28 01:22:34,335] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-07-28 01:22:34,625] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-07-28 01:22:34,639] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-07-28 01:22:36,573] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-07-28 01:22:36,854] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-07-28 01:22:38,380] [pool-1-thread-8] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-07-28 01:22:39,121] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-07-28 01:22:39,430] [pool-1-thread-4] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-07-28 01:22:39,522] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-07-28 01:22:39,975] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-07-28 01:22:41,273] [pool-1-thread-5] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-07-28 01:22:41,965] [pool-1-thread-8] Initializing /data/qa-7642/8.dm4: [testng] [2024-07-28 01:22:43,958] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-07-28 01:22:44,414] [pool-1-thread-4] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-07-28 01:22:45,073] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-07-28 01:22:45,270] [pool-1-thread-7] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-07-28 01:22:46,390] [pool-1-thread-8] Initializing /data/samples/test-tiles.dm3: [testng] [2024-07-28 01:22:46,695] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-07-28 01:22:46,776] [pool-1-thread-5] Initializing /data/qa-21761/example.dm4: [testng] [2024-07-28 01:22:46,832] [pool-1-thread-12] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-07-28 01:22:47,363] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-07-28 01:22:47,697] [pool-1-thread-3] Initializing /data/jay/DMtest2.dm3: [testng] [2024-07-28 01:22:47,867] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-07-28 01:22:47,983] [pool-1-thread-5] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-07-28 01:22:48,228] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-07-28 01:22:49,037] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-07-28 01:22:49,270] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-07-28 01:22:49,493] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-07-28 01:22:50,022] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-07-28 01:22:50,060] [pool-1-thread-10] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-07-28 01:22:50,675] [pool-1-thread-7] Initializing /data/ofra/lowloss.dm3: [testng] [2024-07-28 01:22:50,827] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-07-28 01:22:51,342] [pool-1-thread-1] Initializing /data/jay/dnasample1.dm3: [testng] [2024-07-28 01:22:52,422] [pool-1-thread-8] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-07-28 01:22:52,763] [pool-1-thread-3] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-07-28 01:22:52,794] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-07-28 01:22:53,163] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-07-28 01:22:53,351] [pool-1-thread-3] Initializing /data/jay/DMtest.dm3: [testng] [2024-07-28 01:22:53,483] [pool-1-thread-9] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-07-28 01:22:54,158] [pool-1-thread-6] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-07-28 01:22:54,193] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-07-28 01:22:54,247] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-07-28 01:22:54,644] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-07-28 01:22:55,063] [pool-1-thread-7] Initializing /data/melissa/annotation-test.tif: [testng] [2024-07-28 01:22:55,090] [pool-1-thread-6] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-07-28 01:22:55,145] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-07-28 01:22:55,372] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 12 seconds Finished: SUCCESS