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Started by upstream project "BIOFORMATS-test-repo" build number 135 originally caused by: Started by upstream project "Trigger" build number 155 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins15313731100592460831.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_21141_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:22:29,345 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:29,347 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:22:29,347 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:29,348 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:29,348 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:29,349 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:29,349 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:29,349 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:29,349 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:29,350 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:29,350 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:29,351 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:29,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:29,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:29,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:29,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:29,577 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:29,578 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:29,578 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:29,578 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:29,578 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:22:29,579 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:22:29,579 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 230 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-28 01:22:29,588] [main] java.version = 17.0.2 [testng] 01:22:29,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:29,592 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:29,645 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-28_01-22-29.log] [testng] 01:22:29,646 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-07-28 01:22:29,650] [main] testng.directory = /data [testng] [2024-07-28 01:22:29,651] [main] testng.configDirectory = /config [testng] [2024-07-28 01:22:29,673] [main] testng.multiplier = 1.0 [testng] [2024-07-28 01:22:29,675] [main] testng.in-memory = false [testng] [2024-07-28 01:22:29,675] [main] testng.allow-missing = false [testng] [2024-07-28 01:22:29,675] [main] user.language = en [testng] [2024-07-28 01:22:29,675] [main] user.country = ${user.country} [testng] [2024-07-28 01:22:29,675] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-07-28 01:22:37,354] [main] ---------------------------------------- [testng] [2024-07-28 01:22:37,354] [main] Total files: 4426 [testng] [2024-07-28 01:22:37,354] [main] Scan time: 7.678 s (1 ms/file) [testng] [2024-07-28 01:22:37,354] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-28 01:24:26,267] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] 01:24:26,267 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:24:26,267 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,269 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-28_01-24-26.log] [testng] 01:24:26,269 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ae2147b - End of configuration. [testng] [2024-07-28 01:24:26,345] [pool-1-thread-12] Initializing /data/public/libtiff/jim___cg.tif: [testng] 01:24:26,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:24:26,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,346 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-07-28_01-24-26.log] [testng] 01:24:26,346 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53567ac - End of configuration. [testng] [2024-07-28 01:24:26,377] [pool-1-thread-11] Initializing /data/chris-wood/15ms full low light.tif: [testng] 01:24:26,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:24:26,378 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,379 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-28_01-24-26.log] [testng] 01:24:26,379 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2decdf5f - End of configuration. [testng] [2024-07-28 01:24:26,454] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z006.tif: [testng] 01:24:26,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:24:26,454 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,455 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-28_01-24-26.log] [testng] 01:24:26,456 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30609a03 - End of configuration. [testng] [2024-07-28 01:24:26,490] [pool-1-thread-9] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] 01:24:26,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:24:26,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,492 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-28_01-24-26.log] [testng] 01:24:26,492 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f7cb42b - End of configuration. [testng] [2024-07-28 01:24:26,534] [pool-1-thread-8] Initializing /data/damian/18m.tiff: [testng] 01:24:26,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:24:26,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,535 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-28_01-24-26.log] [testng] 01:24:26,535 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67609478 - End of configuration. [testng] [2024-07-28 01:24:26,571] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z016.tif: [testng] 01:24:26,571 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:24:26,572 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,572 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-28_01-24-26.log] [testng] 01:24:26,573 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c66bfdf - End of configuration. [testng] [2024-07-28 01:24:26,603] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x16.tiff: [testng] 01:24:26,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:24:26,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,603 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-28_01-24-26.log] [testng] 01:24:26,604 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39c87610 - End of configuration. [testng] [2024-07-28 01:24:26,637] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] 01:24:26,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:24:26,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,637 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-28_01-24-26.log] [testng] 01:24:26,638 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55c5c0ed - End of configuration. [testng] [2024-07-28 01:24:26,666] [pool-1-thread-4] Initializing /data/ascb/CYT-92_PasolliMouse1b_4800.tif: [testng] 01:24:26,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:24:26,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,667 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-28_01-24-26.log] [testng] 01:24:26,668 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29c7d154 - End of configuration. [testng] [2024-07-28 01:24:26,714] [pool-1-thread-3] Initializing /data/josiah/cell-Z39.C1.tiff: [testng] 01:24:26,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:24:26,714 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,716 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-28_01-24-26.log] [testng] 01:24:26,716 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61a0f2d3 - End of configuration. [testng] [2024-07-28 01:24:26,751] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] 01:24:26,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:24:26,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:26,752 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-28_01-24-26.log] [testng] 01:24:26,752 |-INFO in ch.qos.logback.core.sift.SiftProcessor@561aa553 - End of configuration. [testng] [2024-07-28 01:24:29,506] [pool-1-thread-3] Initializing /data/misc/mri-stack.tif: [testng] [2024-07-28 01:24:29,561] [pool-1-thread-1] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-07-28 01:24:29,589] [pool-1-thread-9] Initializing /data/sarah/FITC left 100% 1x mag00000.tif: [testng] [2024-07-28 01:24:29,625] [pool-1-thread-5] Initializing /data/josiah/cell-Z39.C0.tiff: [testng] [2024-07-28 01:24:29,657] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-07-28 01:24:29,688] [pool-1-thread-6] Initializing /data/paul-van-schayck/myfile.tif: [testng] [2024-07-28 01:24:29,712] [pool-1-thread-2] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-07-28 01:24:29,758] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs017.TIF: [testng] [2024-07-28 01:24:29,803] [pool-1-thread-10] Initializing /data/josiah/cell-Z32.C1.tiff: [testng] [2024-07-28 01:24:29,836] [pool-1-thread-8] Initializing /data/damian/00m.tiff: [testng] [2024-07-28 01:24:30,751] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-07-28 01:24:30,819] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-07-28 01:24:30,931] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [2024-07-28 01:24:31,020] [pool-1-thread-6] Initializing /data/public/condensation/A6.pattern2.tif: [testng] [2024-07-28 01:24:31,181] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] [2024-07-28 01:24:31,220] [pool-1-thread-3] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-07-28 01:24:31,320] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-07-28 01:24:31,404] [pool-1-thread-1] Initializing /data/marc/ball48_LOCI_RGB_autoscale_10x.tif: [testng] [2024-07-28 01:24:31,531] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z033.tif: [testng] [2024-07-28 01:24:31,665] [pool-1-thread-8] Initializing /data/josiah/cell-Z18.C1.tiff: [testng] [2024-07-28 01:24:32,151] [pool-1-thread-11] Initializing /data/josiah/cell-Z0.C1.tiff: [testng] [2024-07-28 01:24:32,187] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-07-28 01:24:32,230] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-07-28 01:24:32,304] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-07-28 01:24:32,352] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-07-28 01:24:32,384] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo.tif: [testng] [2024-07-28 01:24:32,865] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] [2024-07-28 01:24:32,911] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-07-28 01:24:32,986] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs007.TIF: [testng] [2024-07-28 01:24:33,043] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-07-28 01:24:33,242] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] [2024-07-28 01:24:33,357] [pool-1-thread-5] Initializing /data/misc/mri-old.mov: [testng] [2024-07-28 01:24:33,385] [pool-1-thread-10] Initializing /data/samples/cielab/Ski_TC8-03_sRGB.tif: [testng] [2024-07-28 01:24:33,432] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-07-28 01:24:33,484] [pool-1-thread-1] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-07-28 01:24:33,784] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-07-28 01:24:33,816] [pool-1-thread-8] Initializing /data/julien/CRBMquadtour.tif: [testng] [2024-07-28 01:24:38,693] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] [2024-07-28 01:24:38,864] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-07-28 01:24:38,970] [pool-1-thread-5] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-07-28 01:24:39,225] [pool-1-thread-9] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-07-28 01:24:39,273] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z002.tif: [testng] [2024-07-28 01:24:39,403] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-07-28 01:24:39,446] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-07-28 01:24:39,587] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-05.tiff: [testng] [2024-07-28 01:24:39,618] [pool-1-thread-12] 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[pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] [2024-07-28 01:24:55,976] [pool-1-thread-7] Initializing /data/damian/damian.tif: [testng] [2024-07-28 01:24:56,125] [pool-1-thread-1] Initializing /data/boguslaw/Rab582 3d det gfapBrdUmib1z24Live9-14-2007_11-55-58_AM copy.tif: [testng] [2024-07-28 01:24:56,251] [pool-1-thread-12] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-07-28 01:24:56,322] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z024.tif: [testng] [2024-07-28 01:24:56,358] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z001.tif: [testng] [2024-07-28 01:24:56,657] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z024.tif: [testng] [2024-07-28 01:24:57,062] [pool-1-thread-11] Initializing /data/josh/NESb_C2_TP1.tiff: [testng] [2024-07-28 01:24:57,150] [pool-1-thread-7] Initializing /data/qa-7589/CalGrid.tif: [testng] [2024-07-28 01:24:57,185] [pool-1-thread-10] Initializing /data/tom-kazimiers/test_exiftool2_resave.tiff: [testng] [2024-07-28 01:24:57,545] [pool-1-thread-9] Initializing /data/brian/CurrentSystems.tiff: [testng] [2024-07-28 01:24:57,810] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0245.TIF: [testng] [2024-07-28 01:24:57,974] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z020.tif: [testng] [2024-07-28 01:24:58,131] [pool-1-thread-1] Initializing /data/sub-resolution/Leica-2/Leica-2-subifds.tiff: [testng] [2024-07-28 01:24:58,290] [pool-1-thread-12] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] [2024-07-28 01:24:58,455] [pool-1-thread-10] Initializing /data/brian/061124MitogreenDIV3Cell2-1 copy.tif: [testng] [2024-07-28 01:24:58,563] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z033.tif: [testng] [2024-07-28 01:24:58,964] [pool-1-thread-11] Initializing /data/public/condensation/A1.pattern2.tif: [testng] [2024-07-28 01:24:59,064] [pool-1-thread-4] 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[testng] [2024-07-28 01:26:21,439] [pool-1-thread-4] Initializing /data/ascb/CYT-35_FriendOsmiumEpididymis_4800.tif: [testng] [2024-07-28 01:26:21,748] [pool-1-thread-1] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-07-28 01:26:22,340] [pool-1-thread-8] Initializing /data/edward/TestDoc2.tif: [testng] [2024-07-28 01:26:22,480] [pool-1-thread-1] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-07-28 01:26:23,646] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z040.tif: [testng] [2024-07-28 01:26:23,667] [pool-1-thread-12] Initializing /data/curtis/map/jumps-over: [testng] [2024-07-28 01:26:23,932] [pool-1-thread-12] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-07-28 01:26:24,571] [pool-1-thread-5] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-07-28 01:26:25,290] [pool-1-thread-1] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-07-28 01:26:25,802] 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/data/ascb/CYT-2_BaintonBoylesPhagocytosisYeastB_4800.tif: [testng] [2024-07-28 01:26:35,049] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs012.TIF: [testng] [2024-07-28 01:26:35,213] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-07-28 01:26:35,608] [pool-1-thread-12] Initializing /data/jae/first image.tif: [testng] [2024-07-28 01:26:35,764] [pool-1-thread-6] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-07-28 01:26:35,790] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-07-28 01:26:35,906] [pool-1-thread-3] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-07-28 01:26:38,355] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-07-28 01:26:38,452] [pool-1-thread-11] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-07-28 01:26:38,525] [pool-1-thread-6] Initializing 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Initializing /data/jae/Rat_Hippocampal_Neuron.tif: [testng] [2024-07-28 01:26:41,491] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z012.tif: [testng] [2024-07-28 01:26:41,561] [pool-1-thread-5] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-07-28 01:26:41,761] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-07-28 01:26:41,930] [pool-1-thread-6] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-07-28 01:26:43,420] [pool-1-thread-2] Initializing /data/misc/before 1_C2_TP1.tiff: [testng] [2024-07-28 01:26:43,597] [pool-1-thread-9] Initializing /data/victoria/scan4_1hr_20X_.352g_n180p_2z_0.387644res_9int_C2_TP1.tiff: [testng] [2024-07-28 01:26:43,678] [pool-1-thread-7] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-07-28 01:26:43,762] [pool-1-thread-11] Initializing /data/julien/AVECCHRO.TIF: [testng] [2024-07-28 01:26:43,804] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-07-28 01:26:44,097] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs015.TIF: [testng] [2024-07-28 01:26:44,208] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z028.tif: [testng] [2024-07-28 01:26:44,238] [pool-1-thread-2] Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-07-28 01:26:44,328] [pool-1-thread-11] Initializing /data/jay/10-crop-Stack.tif: [testng] [2024-07-28 01:26:44,672] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x64.tiff: [testng] [2024-07-28 01:26:44,700] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z011.tif: [testng] [2024-07-28 01:26:44,854] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips_fourteen.tiff: [testng] [2024-07-28 01:26:45,001] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-07-28 01:26:45,051] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-07-28 01:26:45,075] [pool-1-thread-9] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-07-28 01:26:45,259] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0206.TIF: [testng] [2024-07-28 01:26:45,523] [pool-1-thread-7] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-07-28 01:26:45,684] [pool-1-thread-5] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-07-28 01:26:46,099] [pool-1-thread-11] Initializing /data/lzw/bigtest5.tif: [testng] [2024-07-28 01:26:46,313] [pool-1-thread-2] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-07-28 01:26:46,366] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z051.tif: [testng] [2024-07-28 01:26:46,390] [pool-1-thread-10] Initializing /data/curtis/images24.tiff: [testng] [2024-07-28 01:26:46,724] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-07-28 01:26:46,874] [pool-1-thread-2] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-07-28 01:26:48,740] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-07-28 01:26:48,764] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z036.tif: [testng] [2024-07-28 01:26:49,039] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-07-28 01:26:49,072] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x48.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 4 minutes 45 seconds Finished: SUCCESS