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Started by upstream project "BIOFORMATS-test-repo" build number 18 originally caused by: Started by upstream project "Trigger" build number 21 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins1691770323038721959.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_2116_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 00:20:20,171 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 00:20:20,173 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 00:20:20,173 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:20:20,174 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 00:20:20,175 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 00:20:20,175 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 00:20:20,176 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 00:20:20,176 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:20:20,177 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 00:20:20,178 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 00:20:20,178 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 00:20:20,178 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 00:20:20,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 00:20:20,390 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 00:20:20,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 00:20:20,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 00:20:20,427 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 00:20:20,427 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 00:20:20,427 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 00:20:20,428 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 00:20:20,428 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 00:20:20,429 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 00:20:20,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 252 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-31 00:20:20,440] [main] java.version = 17.0.2 [testng] 00:20:20,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 00:20:20,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:20:20,495 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-31_00-20-20.log] [testng] 00:20:20,497 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-03-31 00:20:20,499] [main] testng.directory = /data [testng] [2024-03-31 00:20:20,499] [main] testng.configDirectory = /config [testng] [2024-03-31 00:20:20,510] [main] testng.multiplier = 1.0 [testng] [2024-03-31 00:20:20,511] [main] testng.in-memory = false [testng] [2024-03-31 00:20:20,511] [main] testng.allow-missing = false [testng] [2024-03-31 00:20:20,511] [main] user.language = en [testng] [2024-03-31 00:20:20,511] [main] user.country = ${user.country} [testng] [2024-03-31 00:20:20,511] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-03-31 00:20:34,729] [main] ---------------------------------------- [testng] [2024-03-31 00:20:34,730] [main] Total files: 4424 [testng] [2024-03-31 00:20:34,730] [main] Scan time: 14.217 s (3 ms/file) [testng] [2024-03-31 00:20:34,730] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-31 00:22:28,107] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z023.tif: [testng] 00:22:28,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 00:22:28,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,108 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-31_00-22-28.log] [testng] 00:22:28,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53637935 - End of configuration. [testng] [2024-03-31 00:22:28,139] [pool-1-thread-12] Initializing /data/sub-resolution/Leica-1/Leica-1-subifds.tiff: [testng] 00:22:28,139 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 00:22:28,139 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,140 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-31_00-22-28.log] [testng] 00:22:28,140 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c47e805 - End of configuration. [testng] [2024-03-31 00:22:28,180] [pool-1-thread-11] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs004.TIF: [testng] 00:22:28,180 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 00:22:28,181 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,181 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-31_00-22-28.log] [testng] 00:22:28,182 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56b0e8ad - End of configuration. [testng] [2024-03-31 00:22:28,251] [pool-1-thread-10] Initializing /data/josiah/cell-Z28.C1.tiff: [testng] 00:22:28,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 00:22:28,251 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,252 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-31_00-22-28.log] [testng] 00:22:28,252 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a6557a0 - End of configuration. [testng] [2024-03-31 00:22:28,275] [pool-1-thread-9] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 00:22:28,275 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 00:22:28,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,276 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-31_00-22-28.log] [testng] 00:22:28,276 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4be4b611 - End of configuration. [testng] [2024-03-31 00:22:28,300] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0248.TIF: [testng] 00:22:28,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 00:22:28,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,301 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-31_00-22-28.log] [testng] 00:22:28,301 |-INFO in ch.qos.logback.core.sift.SiftProcessor@153767ac - End of configuration. [testng] [2024-03-31 00:22:28,348] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z003.tif: [testng] 00:22:28,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 00:22:28,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,349 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-31_00-22-28.log] [testng] 00:22:28,350 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b1cca7f - End of configuration. [testng] [2024-03-31 00:22:28,372] [pool-1-thread-6] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] 00:22:28,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 00:22:28,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,373 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-31_00-22-28.log] [testng] 00:22:28,373 |-INFO in ch.qos.logback.core.sift.SiftProcessor@280309ba - End of configuration. [testng] [2024-03-31 00:22:28,411] [pool-1-thread-5] Initializing /data/ascb/FND-12_PorterFranziniSarcoplasmic_4800.tif: [testng] 00:22:28,412 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 00:22:28,412 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,412 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-31_00-22-28.log] [testng] 00:22:28,412 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b74842 - End of configuration. [testng] [2024-03-31 00:22:28,461] [pool-1-thread-4] Initializing /data/marc/ball48_original_10x.tif: [testng] 00:22:28,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 00:22:28,461 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,462 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-31_00-22-28.log] [testng] 00:22:28,462 |-INFO in ch.qos.logback.core.sift.SiftProcessor@679f4115 - End of configuration. [testng] [2024-03-31 00:22:28,481] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z004.tif: [testng] 00:22:28,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 00:22:28,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-31_00-22-28.log] [testng] 00:22:28,482 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5144ab6b - End of configuration. [testng] [2024-03-31 00:22:28,510] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] 00:22:28,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 00:22:28,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 00:22:28,511 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-31_00-22-28.log] [testng] 00:22:28,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a4ecf6a - End of configuration. [testng] [2024-03-31 00:22:30,720] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-03-31 00:22:30,748] [pool-1-thread-2] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-03-31 00:22:30,793] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-03-31 00:22:30,823] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-03-31 00:22:30,848] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x48.tiff: [testng] [2024-03-31 00:22:30,873] [pool-1-thread-1] Initializing /data/josiah/cell-Z5.C1.tiff: [testng] [2024-03-31 00:22:30,906] [pool-1-thread-3] Initializing /data/curtis/test3.tiff: [testng] [2024-03-31 00:22:30,929] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z040.tif: [testng] [2024-03-31 00:22:30,957] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z063.tif: [testng] [2024-03-31 00:22:31,553] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] [2024-03-31 00:22:31,613] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-03-31 00:22:31,683] [pool-1-thread-3] Initializing /data/big-images/2kx2k.tif: [testng] [2024-03-31 00:22:31,759] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-03-31 00:22:31,792] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0225.TIF: [testng] [2024-03-31 00:22:31,877] [pool-1-thread-10] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-03-31 00:22:31,928] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-03-31 00:22:31,961] [pool-1-thread-9] Initializing /data/damian/09m.tiff: [testng] [2024-03-31 00:22:32,418] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z024.tif: [testng] [2024-03-31 00:22:32,453] [pool-1-thread-7] Initializing /data/josiah/cell-Z37.C1.tiff: [testng] [2024-03-31 00:22:32,486] [pool-1-thread-1] Initializing /data/ascb/FND-26_PaladeGlycogen_4800.tif: [testng] [2024-03-31 00:22:32,560] [pool-1-thread-6] Initializing /data/josh/3Aa_C2_TP1.tiff: [testng] [2024-03-31 00:22:32,633] [pool-1-thread-10] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] [2024-03-31 00:22:32,681] [pool-1-thread-4] Initializing /data/misc/mri-old.mov: [testng] [2024-03-31 00:22:32,696] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z012.tif: [testng] [2024-03-31 00:22:33,025] [pool-1-thread-4] Initializing /data/caroline/1828_L2_series_1.tif: [testng] [2024-03-31 00:22:33,287] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0224.TIF: [testng] [2024-03-31 00:22:33,336] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z028.tif: [testng] [2024-03-31 00:22:33,359] [pool-1-thread-7] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-03-31 00:22:33,413] [pool-1-thread-8] Initializing /data/brian/061124MitogreenDIV3Cell2-1 copy.tif: [testng] [2024-03-31 00:22:33,848] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z027.tif: [testng] [2024-03-31 00:22:33,880] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-03-31 00:22:33,923] [pool-1-thread-12] Initializing /data/kelsey/Live-Dead Assay 4000 nm pitch PU.TIF: [testng] [2024-03-31 00:22:34,188] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-02.tiff: [testng] [2024-03-31 00:22:34,278] [pool-1-thread-3] Initializing /data/brian/Ch1_fld1.tif: [testng] [2024-03-31 00:22:34,437] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-03-31 00:22:34,581] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-03-31 00:22:34,648] [pool-1-thread-6] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-03-31 00:22:34,774] [pool-1-thread-5] Initializing /data/lzw/test.tif: [testng] [2024-03-31 00:22:34,806] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0215.TIF: [testng] [2024-03-31 00:22:34,870] [pool-1-thread-4] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-03-31 00:22:35,322] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-03-31 00:22:36,655] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0218.TIF: [testng] [2024-03-31 00:22:36,714] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z037.tif: [testng] [2024-03-31 00:22:36,748] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs005.TIF: [testng] [2024-03-31 00:22:36,900] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-03-31 00:22:37,136] [pool-1-thread-4] Initializing /data/public/condensation/C4.pattern7.tif: [testng] [2024-03-31 00:22:37,182] [pool-1-thread-10] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] [2024-03-31 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00:24:33,318] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z020.tif: [testng] [2024-03-31 00:24:33,532] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-03-31 00:24:33,698] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0237.TIF: [testng] [2024-03-31 00:24:33,787] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z033.tif: [testng] [2024-03-31 00:24:33,819] [pool-1-thread-2] Initializing /data/brian/insight.tiff: [testng] [2024-03-31 00:24:33,886] [pool-1-thread-6] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-03-31 00:24:33,926] [pool-1-thread-3] Initializing /data/wayne/Rockies-48bit-rgb.tif: [testng] [2024-03-31 00:24:34,060] [pool-1-thread-9] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-03-31 00:24:34,130] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-03-31 00:24:34,363] [pool-1-thread-11] Initializing /data/wayne/apple.tif: [testng] [2024-03-31 00:24:34,433] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-03-31 00:24:34,548] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-03-31 00:24:34,636] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z005.tif: [testng] [2024-03-31 00:24:34,920] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z025.tif: [testng] [2024-03-31 00:24:34,969] [pool-1-thread-9] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-03-31 00:24:35,135] [pool-1-thread-6] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-03-31 00:24:35,171] [pool-1-thread-7] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-03-31 00:24:35,191] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-03-31 00:24:35,214] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-03-31 00:24:35,498] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-03-31 00:24:35,580] [pool-1-thread-11] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-03-31 00:24:35,789] [pool-1-thread-9] Initializing /data/martin/tester.tif: [testng] [2024-03-31 00:24:35,955] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-03-31 00:24:36,053] [pool-1-thread-5] Initializing /data/josiah/cell-Z35.C0.tiff: [testng] [2024-03-31 00:24:36,159] [pool-1-thread-12] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-03-31 00:24:36,265] [pool-1-thread-6] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-03-31 00:24:37,244] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-03-31 00:24:37,468] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z034.tif: [testng] [2024-03-31 00:24:37,596] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-03-31 00:24:37,700] [pool-1-thread-7] Initializing /data/ascb/bad/FND-20_FawcettLongitudinalMidpieces_4800.tif: [testng] [2024-03-31 00:24:37,791] [pool-1-thread-5] Initializing /data/ascb/FND-22_FawcettLongitudinalMammalian_4800.tif: [testng] [2024-03-31 00:24:38,110] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-03-31 00:24:38,160] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z010.tif: [testng] [2024-03-31 00:24:38,311] [pool-1-thread-3] Initializing /data/public/libtiff/strike.tif: [testng] [2024-03-31 00:24:38,493] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-03-31 00:24:38,638] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z056.tif: [testng] [2024-03-31 00:24:38,876] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-16x16.tiff: [testng] [2024-03-31 00:24:38,960] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-03-31 00:24:39,210] [pool-1-thread-1] Initializing /data/public/condensation/C4.pattern9.tif: [testng] [2024-03-31 00:24:39,364] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-03-31 00:24:39,442] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z013.tif: [testng] [2024-03-31 00:24:39,486] [pool-1-thread-4] Initializing /data/public/condensation/A6.pattern1.tif: [testng] [2024-03-31 00:24:39,631] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-03-31 00:24:39,845] [pool-1-thread-3] Initializing /data/curtis/test1.tiff: [testng] [2024-03-31 00:24:39,925] [pool-1-thread-2] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-03-31 00:24:40,118] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs002.TIF: [testng] [2024-03-31 00:24:40,161] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-03-31 00:24:40,384] [pool-1-thread-3] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-03-31 00:24:40,418] [pool-1-thread-4] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-03-31 00:24:40,819] [pool-1-thread-9] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-03-31 00:24:41,008] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-03-31 00:24:41,769] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-03-31 00:24:42,125] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0235.TIF: [testng] [2024-03-31 00:24:42,313] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0220.TIF: [testng] [2024-03-31 00:24:43,042] [pool-1-thread-9] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-03-31 00:24:43,114] [pool-1-thread-3] Initializing /data/wayne/northern-8bit.tif: [testng] [2024-03-31 00:24:43,429] [pool-1-thread-4] Initializing /data/glen/6307wmmidb4237m_cmle.tif: [testng] [2024-03-31 00:24:44,298] [pool-1-thread-3] Initializing /data/jae/Second image.tif: [testng] [2024-03-31 00:24:44,385] [pool-1-thread-1] Initializing /data/jayne/Zst_13/WTERZ2_Series13_z000_ch00.tif: [testng] [2024-03-31 00:24:44,762] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z057.tif: [testng] [2024-03-31 00:24:45,056] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-03-31 00:24:45,301] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z043.tif: [testng] [2024-03-31 00:24:45,353] [pool-1-thread-8] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-03-31 00:24:45,631] [pool-1-thread-4] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-03-31 00:24:45,696] [pool-1-thread-11] Initializing /data/lzw/BoutonVsAxon.tif: [testng] [2024-03-31 00:24:45,901] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-03-31 00:24:46,084] [pool-1-thread-5] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-03-31 00:24:46,358] [pool-1-thread-9] Initializing /data/josiah/cell-Z11.C1.tiff: [testng] [2024-03-31 00:24:46,485] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-03-31 00:24:46,732] [pool-1-thread-8] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-03-31 00:24:46,795] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-03-31 00:24:46,868] [pool-1-thread-9] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-03-31 00:24:46,919] [pool-1-thread-3] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-03-31 00:24:47,213] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0252.TIF: [testng] [2024-03-31 00:24:47,259] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] [2024-03-31 00:24:47,528] [pool-1-thread-9] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-03-31 00:24:47,722] [pool-1-thread-3] Initializing /data/tom-kazimiers/test_exiftool2_resave.tiff: [testng] [2024-03-31 00:24:47,802] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z011.tif: [testng] [2024-03-31 00:24:47,926] [pool-1-thread-6] Initializing /data/ascb/FND-28a_PaladeHepatocyteLabeled_4800.tif: [testng] [2024-03-31 00:24:49,396] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0203.TIF: [testng] [2024-03-31 00:24:49,503] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-03-31 00:24:49,539] [pool-1-thread-5] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-03-31 00:24:49,603] [pool-1-thread-9] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-03-31 00:24:49,830] [pool-1-thread-11] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-03-31 00:24:49,953] [pool-1-thread-8] Initializing /data/curtis/test2.tiff: [testng] [2024-03-31 00:24:50,062] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] [2024-03-31 00:24:50,103] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z000.tif: [testng] [2024-03-31 00:24:50,262] [pool-1-thread-8] Initializing /data/josiah/cell-Z8.C1.tiff: [testng] [2024-03-31 00:24:50,303] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-03-31 00:24:50,489] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-03-31 00:24:50,514] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-03-31 00:24:50,622] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z016.tif: [testng] [2024-03-31 00:24:50,691] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z010.tif: [testng] [2024-03-31 00:24:50,805] [pool-1-thread-8] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-03-31 00:24:50,933] [pool-1-thread-3] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-03-31 00:24:50,973] [pool-1-thread-9] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-03-31 00:24:55,303] [pool-1-thread-1] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-03-31 00:24:55,418] [pool-1-thread-5] Initializing /data/curtis/clown.tif: [testng] [2024-03-31 00:24:55,614] [pool-1-thread-11] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-03-31 00:24:55,779] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-03-31 00:24:55,900] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z039.tif: [testng] [2024-03-31 00:24:55,951] [pool-1-thread-1] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-03-31 00:24:56,248] [pool-1-thread-3] Initializing /data/public/condensation/C4.pattern6.tif: [testng] [2024-03-31 00:24:56,357] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z034.tif: [testng] [2024-03-31 00:24:56,444] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0223.TIF: [testng] [2024-03-31 00:24:56,795] [pool-1-thread-8] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-03-31 00:24:56,951] [pool-1-thread-3] Initializing /data/curtis/map/brown-fox: [testng] [2024-03-31 00:24:57,278] [pool-1-thread-3] Initializing /data/zstd-compressed/beads.tif: [testng] [2024-03-31 00:24:57,330] [pool-1-thread-5] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] [2024-03-31 00:24:57,379] [pool-1-thread-1] Initializing /data/public/libtiff/quad-tile.tif: [testng] [2024-03-31 00:24:57,409] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-03-31 00:24:57,916] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z000.tif: [testng] [2024-03-31 00:24:57,946] [pool-1-thread-3] Initializing /data/ascb/CYT-23_BaintonGlycogenB_4800.tif: [testng] [2024-03-31 00:24:59,767] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0245.TIF: [testng] [2024-03-31 00:25:00,112] [pool-1-thread-1] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-03-31 00:25:00,240] [pool-1-thread-8] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-03-31 00:25:00,423] [pool-1-thread-12] Initializing /data/ascb/CYT-90_PasolliMousePanoramic_4800.tif: [testng] [2024-03-31 00:25:00,543] [pool-1-thread-7] Initializing /data/damian/33m.tiff: [testng] [2024-03-31 00:25:00,983] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-03-31 00:25:01,225] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-03-31 00:25:01,286] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0213.TIF: [testng] [2024-03-31 00:25:01,461] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-03-31 00:25:01,815] [pool-1-thread-7] Initializing /data/public/condensation/B12.pattern4.tif: [testng] [2024-03-31 00:25:02,815] [pool-1-thread-7] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-03-31 00:25:02,863] [pool-1-thread-10] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-03-31 00:25:02,952] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 4 seconds Finished: SUCCESS