Started by upstream project "BIOFORMATS-test-repo" build number 136 originally caused by: Started by upstream project "Trigger" build number 156 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins9656775378238292292.sh + '[' nikon-jp2 = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_21439_merge_ci -v /uod/idr/repos/curated/nikon-jp2:/data -v /uod/idr-scratch/merge-ci/curated/nikon-jp2:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:35:59,845 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:36:00,157 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:36:00,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:36:00,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:36:00,266 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:36:00,266 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:36:00,266 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:36:00,267 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:36:00,267 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:36:00,283 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:36:00,284 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 852 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-07-29 02:36:00,346] [main] java.version = 1.8.0_342 [testng] 02:36:00,350 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:36:00,350 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:00,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-07-29_02-36-00.log] [testng] 02:36:00,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-07-29 02:36:00,618] [main] testng.directory = /data [testng] [2024-07-29 02:36:00,618] [main] testng.configDirectory = /config [testng] [2024-07-29 02:36:00,715] [main] testng.multiplier = 1.0 [testng] [2024-07-29 02:36:00,716] [main] testng.in-memory = false [testng] [2024-07-29 02:36:00,716] [main] testng.allow-missing = false [testng] [2024-07-29 02:36:00,716] [main] user.language = fr [testng] [2024-07-29 02:36:00,716] [main] user.country = FR [testng] [2024-07-29 02:36:00,716] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-07-29 02:36:02,110] [main] ---------------------------------------- [testng] [2024-07-29 02:36:02,110] [main] Total files: 11 [testng] [2024-07-29 02:36:02,111] [main] Scan time: 1.394 s (126 ms/file) [testng] [2024-07-29 02:36:02,111] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 11 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-07-29 02:36:04,900] [pool-1-thread-1] Initializing /data/kira/DapiFitcTexRed008G.tif: [testng] 02:36:04,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:36:04,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:04,901 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-07-29_02-36-04.log] [testng] 02:36:04,901 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7be88506 - End of configuration. [testng] [2024-07-29 02:36:04,996] [pool-1-thread-11] Initializing /data/kira/DapiFitcTexRed008BGR.tif: [testng] 02:36:04,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:36:04,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:04,998 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-07-29_02-36-04.log] [testng] 02:36:04,999 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a94d52a - End of configuration. [testng] [2024-07-29 02:36:05,093] [pool-1-thread-10] Initializing /data/kira/DapiFitcTexRed006.png: [testng] 02:36:05,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:36:05,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,094 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-07-29_02-36-05.log] [testng] 02:36:05,095 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f394ba - End of configuration. [testng] [2024-07-29 02:36:05,104] [pool-1-thread-9] Initializing /data/kira/DapiFitcTexRed005.bmp: [testng] 02:36:05,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:36:05,104 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-07-29_02-36-05.log] [testng] 02:36:05,105 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3605fe2 - End of configuration. [testng] [2024-07-29 02:36:05,114] [pool-1-thread-8] Initializing /data/kira/DapiFitcTexRed001.jp2: [testng] 02:36:05,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:36:05,114 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,115 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-07-29_02-36-05.log] [testng] 02:36:05,116 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d497b44 - End of configuration. [testng] [2024-07-29 02:36:05,251] [pool-1-thread-7] Initializing /data/kira/DapiFitcTexRed004.tif: [testng] 02:36:05,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:36:05,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,252 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-07-29_02-36-05.log] [testng] 02:36:05,253 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1781f741 - End of configuration. [testng] [2024-07-29 02:36:05,417] [pool-1-thread-6] Initializing /data/kira/DapiFitcTexRed008B.tif: [testng] 02:36:05,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:36:05,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,418 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-07-29_02-36-05.log] [testng] 02:36:05,418 |-INFO in ch.qos.logback.core.sift.SiftProcessor@159992f9 - End of configuration. [testng] [2024-07-29 02:36:05,477] [pool-1-thread-5] Initializing /data/kira/DapiFitcTexRed008.jp2: [testng] 02:36:05,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:36:05,478 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,478 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-07-29_02-36-05.log] [testng] 02:36:05,479 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1306c9d3 - End of configuration. [testng] [2024-07-29 02:36:05,584] [pool-1-thread-4] Initializing /data/kira/DapiFitcTexRed007.gif: [testng] 02:36:05,584 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:36:05,585 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,585 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-07-29_02-36-05.log] [testng] 02:36:05,586 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40ad90c3 - End of configuration. [testng] [2024-07-29 02:36:05,599] [pool-1-thread-3] Initializing /data/kira/DapiFitcTexRed003.jpg: [testng] 02:36:05,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:36:05,600 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,600 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-07-29_02-36-05.log] [testng] 02:36:05,601 |-INFO in ch.qos.logback.core.sift.SiftProcessor@424e21f1 - End of configuration. [testng] [2024-07-29 02:36:05,656] [pool-1-thread-2] Initializing /data/kira/DapiFitcTexRed008R.tif: [testng] 02:36:05,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:36:05,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:36:05,657 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-07-29_02-36-05.log] [testng] 02:36:05,657 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d92d90f - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 583, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 23 seconds Finished: SUCCESS