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Started by upstream project "BIOFORMATS-test-repo" build number 19 originally caused by: Started by upstream project "Trigger" build number 22 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins7024980664003526704.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_2271_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:21:13,954 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:13,956 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:21:13,956 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:13,957 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:13,957 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:13,958 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:13,958 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:13,958 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:13,959 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:13,959 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:13,959 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:13,959 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:14,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:14,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:14,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:14,232 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:14,240 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:14,240 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:14,241 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:14,241 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:14,241 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:21:14,242 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:21:14,242 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 283 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-01 01:21:14,253] [main] java.version = 1.8.0_342 [testng] 01:21:14,256 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:14,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:14,304 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-01_01-21-14.log] [testng] 01:21:14,306 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-01 01:21:14,308] [main] testng.directory = /data [testng] [2024-04-01 01:21:14,308] [main] testng.configDirectory = /config [testng] [2024-04-01 01:21:14,321] [main] testng.multiplier = 1.0 [testng] [2024-04-01 01:21:14,322] [main] testng.in-memory = false [testng] [2024-04-01 01:21:14,322] [main] testng.allow-missing = false [testng] [2024-04-01 01:21:14,322] [main] user.language = fr [testng] [2024-04-01 01:21:14,322] [main] user.country = FR [testng] [2024-04-01 01:21:14,322] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-01 01:21:15,357] [main] ---------------------------------------- [testng] [2024-04-01 01:21:15,357] [main] Total files: 103 [testng] [2024-04-01 01:21:15,357] [main] Scan time: 1.035 s (10 ms/file) [testng] [2024-04-01 01:21:15,357] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-01 01:21:25,208] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] 01:21:25,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:25,209 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,211 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-01_01-21-25.log] [testng] 01:21:25,211 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1bbb7bce - End of configuration. [testng] [2024-04-01 01:21:25,244] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] 01:21:25,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:25,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,245 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-01_01-21-25.log] [testng] 01:21:25,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d00b033 - End of configuration. [testng] [2024-04-01 01:21:25,261] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] 01:21:25,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:25,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,262 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-01_01-21-25.log] [testng] 01:21:25,262 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28560e30 - End of configuration. [testng] [2024-04-01 01:21:25,275] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] 01:21:25,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:25,276 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,276 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-01_01-21-25.log] [testng] 01:21:25,277 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2eb8bfbf - End of configuration. [testng] [2024-04-01 01:21:25,323] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 01:21:25,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:25,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,324 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-01_01-21-25.log] [testng] 01:21:25,324 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11856d41 - End of configuration. [testng] [2024-04-01 01:21:25,339] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] 01:21:25,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:25,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,340 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-01_01-21-25.log] [testng] 01:21:25,340 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e089c2a - End of configuration. [testng] [2024-04-01 01:21:25,463] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] 01:21:25,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:25,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,464 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-01_01-21-25.log] [testng] 01:21:25,464 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4bb339d5 - End of configuration. [testng] [2024-04-01 01:21:25,477] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] 01:21:25,477 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:25,477 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,478 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-01_01-21-25.log] [testng] 01:21:25,478 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41c60d3a - End of configuration. [testng] [2024-04-01 01:21:25,492] [pool-1-thread-5] Initializing /data/jay/Carbon.34.dm3: [testng] 01:21:25,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:25,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,492 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-01_01-21-25.log] [testng] 01:21:25,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38f1559f - End of configuration. [testng] [2024-04-01 01:21:25,592] [pool-1-thread-4] Initializing /data/jay/dnasample1.dm3: [testng] 01:21:25,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:25,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,593 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-01_01-21-25.log] [testng] 01:21:25,594 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ea7708a - End of configuration. [testng] [2024-04-01 01:21:25,617] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] 01:21:25,617 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:25,617 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,618 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-01_01-21-25.log] [testng] 01:21:25,618 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6525c97f - End of configuration. [testng] [2024-04-01 01:21:25,649] [pool-1-thread-2] Initializing /data/jay/ViewDMtest.dm3: [testng] 01:21:25,649 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:25,649 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:25,650 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-01_01-21-25.log] [testng] 01:21:25,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1353d686 - End of configuration. [testng] [2024-04-01 01:21:27,647] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-04-01 01:21:27,659] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-04-01 01:21:27,794] [pool-1-thread-6] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-04-01 01:21:28,566] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-04-01 01:21:28,932] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-04-01 01:21:29,480] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-04-01 01:21:29,625] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-04-01 01:21:30,310] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-04-01 01:21:31,252] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-04-01 01:21:32,202] [pool-1-thread-5] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-04-01 01:21:32,321] [pool-1-thread-7] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-04-01 01:21:32,419] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-04-01 01:21:32,476] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3: [testng] [2024-04-01 01:21:32,817] [pool-1-thread-3] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-04-01 01:21:32,831] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-04-01 01:21:32,938] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-04-01 01:21:32,949] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-04-01 01:21:33,850] [pool-1-thread-2] Initializing /data/jay/DMtest2.dm3: [testng] [2024-04-01 01:21:34,122] [pool-1-thread-7] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-04-01 01:21:34,159] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-04-01 01:21:34,744] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-04-01 01:21:35,066] [pool-1-thread-6] Initializing /data/qa-7642/8.dm4: [testng] [2024-04-01 01:21:35,130] [pool-1-thread-9] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-04-01 01:21:36,206] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-04-01 01:21:36,268] [pool-1-thread-11] Initializing /data/melissa/annotation-test.tif: [testng] [2024-04-01 01:21:36,510] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-04-01 01:21:37,051] [pool-1-thread-11] Initializing /data/qa-21761/example.dm4: [testng] [2024-04-01 01:21:37,259] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-04-01 01:21:37,324] [pool-1-thread-8] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-04-01 01:21:38,366] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-04-01 01:21:38,422] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-04-01 01:21:38,878] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-04-01 01:21:39,121] [pool-1-thread-6] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-04-01 01:21:39,432] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-04-01 01:21:39,467] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-04-01 01:21:39,756] [pool-1-thread-2] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-04-01 01:21:39,992] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-04-01 01:21:40,013] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-04-01 01:21:40,497] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-04-01 01:21:40,653] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-04-01 01:21:41,084] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-04-01 01:21:42,547] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-04-01 01:21:42,641] [pool-1-thread-8] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-04-01 01:21:43,189] [pool-1-thread-5] Initializing /data/jay/smallerfile.dm3: [testng] [2024-04-01 01:21:43,439] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-04-01 01:21:43,916] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-04-01 01:21:44,732] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-04-01 01:21:44,844] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-04-01 01:21:45,647] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-04-01 01:21:45,913] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-04-01 01:21:46,550] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-04-01 01:21:46,576] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-04-01 01:21:47,440] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-04-01 01:21:47,522] [pool-1-thread-8] Initializing /data/samples/test-tiles.dm3: [testng] [2024-04-01 01:21:47,665] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-04-01 01:21:47,837] [pool-1-thread-8] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-04-01 01:21:48,479] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-04-01 01:21:50,552] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-04-01 01:21:51,039] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-04-01 01:21:52,478] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-04-01 01:21:53,763] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-04-01 01:21:54,283] [pool-1-thread-1] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-04-01 01:21:56,671] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-04-01 01:21:56,999] [pool-1-thread-3] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-04-01 01:21:57,610] [pool-1-thread-10] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-04-01 01:21:58,167] [pool-1-thread-10] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-04-01 01:21:58,233] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-04-01 01:21:58,269] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-04-01 01:21:58,316] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-04-01 01:21:58,814] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-04-01 01:21:58,905] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-04-01 01:21:59,192] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-04-01 01:22:00,520] [pool-1-thread-5] Initializing /data/jay/DMtest.dm3: [testng] [2024-04-01 01:22:01,010] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-04-01 01:22:02,667] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-04-01 01:22:02,988] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-04-01 01:22:03,378] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-04-01 01:22:04,537] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-04-01 01:22:04,901] [pool-1-thread-10] Initializing /data/jay/dnasample.tif: [testng] [2024-04-01 01:22:06,343] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-04-01 01:22:06,433] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-04-01 01:22:06,864] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-04-01 01:22:06,934] [pool-1-thread-12] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-04-01 01:22:07,243] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-04-01 01:22:07,558] [pool-1-thread-5] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-04-01 01:22:07,808] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 18 seconds Finished: SUCCESS