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Started by upstream project "BIOFORMATS-test-repo" build number 19 originally caused by: Started by upstream project "Trigger" build number 22 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins12168064293753948777.sh + '[' noaa-hrd = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_2378_merge_ci -v /uod/idr/repos/curated/noaa-hrd:/data -v /uod/idr-scratch/merge-ci/curated/noaa-hrd:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:19:19,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:19:19,072 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:19:19,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:19:19,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:19:19,144 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:19:19,144 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:19:19,144 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:19:19,145 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:19:19,145 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:19:19,147 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:19:19,147 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 431 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-01 02:19:19,161] [main] java.version = 1.8.0_342 [testng] 02:19:19,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:19:19,168 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:19,246 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-01_02-19-19.log] [testng] 02:19:19,248 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-01 02:19:19,250] [main] testng.directory = /data [testng] [2024-04-01 02:19:19,251] [main] testng.configDirectory = /config [testng] [2024-04-01 02:19:19,264] [main] testng.multiplier = 1.0 [testng] [2024-04-01 02:19:19,265] [main] testng.in-memory = false [testng] [2024-04-01 02:19:19,265] [main] testng.allow-missing = false [testng] [2024-04-01 02:19:19,265] [main] user.language = fr [testng] [2024-04-01 02:19:19,265] [main] user.country = FR [testng] [2024-04-01 02:19:19,265] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-01 02:19:21,707] [main] ---------------------------------------- [testng] [2024-04-01 02:19:21,708] [main] Total files: 9 [testng] [2024-04-01 02:19:21,708] [main] Scan time: 2.442 s (271 ms/file) [testng] [2024-04-01 02:19:21,708] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 9 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-01 02:19:23,021] [pool-1-thread-1] Initializing /data/andrew/AL021992_0824_1502: [testng] 02:19:23,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:19:23,022 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:23,023 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-01_02-19-23.log] [testng] 02:19:23,024 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17349047 - End of configuration. [testng] [2024-04-01 02:19:23,146] [pool-1-thread-9] Initializing /data/andrew/AL021992_0824_0400: [testng] 02:19:23,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:19:23,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:23,149 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-01_02-19-23.log] [testng] 02:19:23,151 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b3834b7 - End of configuration. [testng] [2024-04-01 02:19:23,262] [pool-1-thread-8] Initializing /data/andrew/AL021992_0824_0400marine: [testng] 02:19:23,263 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:19:23,263 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:23,264 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-01_02-19-23.log] [testng] 02:19:23,265 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72c57905 - End of configuration. [testng] [2024-04-01 02:19:23,360] [pool-1-thread-7] Initializing /data/iris/AL112001_1009_0130: [testng] 02:19:23,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:19:23,361 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:23,362 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-01_02-19-23.log] [testng] 02:19:23,362 |-INFO in ch.qos.logback.core.sift.SiftProcessor@428c08ab - End of configuration. [testng] [2024-04-01 02:19:23,481] [pool-1-thread-6] Initializing /data/andrew/AL021992_0824_1502marine: [testng] 02:19:23,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:19:23,482 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:23,482 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-01_02-19-23.log] [testng] 02:19:23,483 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e8f0603 - End of configuration. [testng] [2024-04-01 02:19:23,557] [pool-1-thread-5] Initializing /data/andrew/AL021992_0824_1100marine: [testng] 02:19:23,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:19:23,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:23,558 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-01_02-19-23.log] [testng] 02:19:23,559 |-INFO in ch.qos.logback.core.sift.SiftProcessor@27816f18 - End of configuration. [testng] [2024-04-01 02:19:23,655] [pool-1-thread-4] Initializing /data/andrew/AL021992_0824_0900marine: [testng] 02:19:23,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:19:23,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:23,656 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-01_02-19-23.log] [testng] 02:19:23,657 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a29a7b7 - End of configuration. [testng] [2024-04-01 02:19:23,742] [pool-1-thread-3] Initializing /data/andrew/AL021992_0824_0900: [testng] 02:19:23,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:19:23,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:23,743 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-01_02-19-23.log] [testng] 02:19:23,744 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58fc4a38 - End of configuration. [testng] [2024-04-01 02:19:23,826] [pool-1-thread-2] Initializing /data/andrew/AL021992_0824_1100: [testng] 02:19:23,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:19:23,826 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:23,827 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-01_02-19-23.log] [testng] 02:19:23,827 |-INFO in ch.qos.logback.core.sift.SiftProcessor@221806e9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 477, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 13 seconds Finished: SUCCESS