![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 20 originally caused by: Started by upstream project "Trigger" build number 23 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins16344630475256993040.sh + '[' lim = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_2447_merge_ci -v /uod/idr/repos/curated/lim:/data -v /uod/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:21:40,228 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:40,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:21:40,230 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:40,231 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:40,231 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:40,232 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:40,232 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:40,232 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:40,233 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:40,233 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:40,234 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:40,234 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:40,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:40,431 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:40,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:40,463 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:40,470 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:40,471 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:40,471 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:40,472 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:40,472 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:21:40,473 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:21:40,473 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 240 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-02 01:21:40,486] [main] java.version = 11.0.16 [testng] 01:21:40,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:40,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:40,548 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-02_01-21-40.log] [testng] 01:21:40,550 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-04-02 01:21:40,553] [main] testng.directory = /data [testng] [2024-04-02 01:21:40,553] [main] testng.configDirectory = /config [testng] [2024-04-02 01:21:40,566] [main] testng.multiplier = 1.0 [testng] [2024-04-02 01:21:40,567] [main] testng.in-memory = false [testng] [2024-04-02 01:21:40,567] [main] testng.allow-missing = false [testng] [2024-04-02 01:21:40,567] [main] user.language = en [testng] [2024-04-02 01:21:40,567] [main] user.country = ${user.country} [testng] [2024-04-02 01:21:40,567] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-04-02 01:21:40,981] [main] ---------------------------------------- [testng] [2024-04-02 01:21:40,981] [main] Total files: 21 [testng] [2024-04-02 01:21:40,981] [main] Scan time: 0.413 s (19 ms/file) [testng] [2024-04-02 01:21:40,981] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 20 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-02 01:21:42,260] [pool-1-thread-1] Initializing /data/venu/Kontrolle0010.lim: [testng] 01:21:42,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:42,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,263 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-02_01-21-42.log] [testng] 01:21:42,264 |-INFO in ch.qos.logback.core.sift.SiftProcessor@76f60ac2 - End of configuration. [testng] [2024-04-02 01:21:42,338] [pool-1-thread-12] Initializing /data/venu/Kontrolle0018.lim: [testng] 01:21:42,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:42,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,340 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-02_01-21-42.log] [testng] 01:21:42,341 |-INFO in ch.qos.logback.core.sift.SiftProcessor@766d7409 - End of configuration. [testng] [2024-04-02 01:21:42,361] [pool-1-thread-11] Initializing /data/venu/Kontrolle0008.lim: [testng] 01:21:42,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:42,362 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,363 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-02_01-21-42.log] [testng] 01:21:42,363 |-INFO in ch.qos.logback.core.sift.SiftProcessor@140fd271 - End of configuration. [testng] [2024-04-02 01:21:42,381] [pool-1-thread-10] Initializing /data/venu/Kontrolle0021.lim: [testng] 01:21:42,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:42,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,382 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-02_01-21-42.log] [testng] 01:21:42,383 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5457b557 - End of configuration. [testng] [2024-04-02 01:21:42,399] [pool-1-thread-9] Initializing /data/venu/Kontrolle0007.lim: [testng] 01:21:42,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:42,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,401 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-02_01-21-42.log] [testng] 01:21:42,401 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66aebe46 - End of configuration. [testng] [2024-04-02 01:21:42,419] [pool-1-thread-8] Initializing /data/venu/Kontrolle0005.lim: [testng] 01:21:42,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:42,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,421 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-02_01-21-42.log] [testng] 01:21:42,421 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25aa77be - End of configuration. [testng] [2024-04-02 01:21:42,441] [pool-1-thread-7] Initializing /data/venu/Kontrolle0016.lim: [testng] 01:21:42,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:42,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,442 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-02_01-21-42.log] [testng] 01:21:42,443 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cda5600 - End of configuration. [testng] [2024-04-02 01:21:42,460] [pool-1-thread-6] Initializing /data/venu/Kontrolle0004.lim: [testng] 01:21:42,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:42,460 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,461 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-02_01-21-42.log] [testng] 01:21:42,462 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11b329a9 - End of configuration. [testng] [2024-04-02 01:21:42,485] [pool-1-thread-5] Initializing /data/venu/Kontrolle0002.lim: [testng] 01:21:42,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:42,485 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,486 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-02_01-21-42.log] [testng] 01:21:42,486 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1186eebb - End of configuration. [testng] [2024-04-02 01:21:42,509] [pool-1-thread-4] Initializing /data/venu/Kontrolle0015.lim: [testng] 01:21:42,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:42,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,510 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-02_01-21-42.log] [testng] 01:21:42,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c90b86f - End of configuration. [testng] [2024-04-02 01:21:42,531] [pool-1-thread-3] Initializing /data/venu/Kontrolle0014.lim: [testng] 01:21:42,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:42,531 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,532 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-02_01-21-42.log] [testng] 01:21:42,533 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f83310a - End of configuration. [testng] [2024-04-02 01:21:42,554] [pool-1-thread-2] Initializing /data/venu/Kontrolle0020.lim: [testng] 01:21:42,554 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:42,554 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,555 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-02_01-21-42.log] [testng] 01:21:42,556 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ed96fc4 - End of configuration. [testng] [2024-04-02 01:21:44,858] [pool-1-thread-3] Initializing /data/venu/Kontrolle0012.lim: [testng] [2024-04-02 01:21:44,871] [pool-1-thread-7] Initializing /data/venu/Kontrolle0019.lim: [testng] [2024-04-02 01:21:44,882] [pool-1-thread-11] Initializing /data/venu/Kontrolle0001.lim: [testng] [2024-04-02 01:21:44,892] [pool-1-thread-1] Initializing /data/venu/Kontrolle0013.lim: [testng] [2024-04-02 01:21:44,905] [pool-1-thread-10] Initializing /data/venu/Kontrolle0009.lim: [testng] [2024-04-02 01:21:44,918] [pool-1-thread-6] Initializing /data/venu/Kontrolle0017.lim: [testng] [2024-04-02 01:21:44,930] [pool-1-thread-8] Initializing /data/venu/Kontrolle0003.lim: [testng] [2024-04-02 01:21:44,943] [pool-1-thread-9] Initializing /data/venu/Kontrolle0011.lim: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1060, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 9 seconds Finished: SUCCESS