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Started by upstream project "BIOFORMATS-test-repo" build number 2 originally caused by: Started by upstream project "Trigger" build number 3 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@10 [BIOFORMATS-test-folder@10] $ /bin/bash -xe /tmp/jenkins6227554309511329019.sh + '[' ome-xml = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_270_merge_ci -v /uod/idr/repos/curated/ome-xml:/data -v /uod/idr-scratch/merge-ci/curated/ome-xml:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:04:05,278 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:04:05,280 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 02:04:05,280 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:04:05,281 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:04:05,281 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:04:05,281 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:04:05,281 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:04:05,281 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:04:05,282 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:04:05,282 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:04:05,282 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:04:05,282 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:04:05,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:04:05,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:04:05,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:04:05,614 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:04:05,622 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:04:05,622 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:04:05,622 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:04:05,623 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:04:05,623 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 02:04:05,624 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 02:04:05,624 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 342 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-03-15 02:04:05,634] [main] java.version = 1.8.0_342 [testng] 02:04:05,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:04:05,637 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:04:05,695 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-03-15_02-04-05.log] [testng] 02:04:05,696 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-03-15 02:04:05,698] [main] testng.directory = /data [testng] [2024-03-15 02:04:05,699] [main] testng.configDirectory = /config [testng] [2024-03-15 02:04:05,711] [main] testng.multiplier = 1.0 [testng] [2024-03-15 02:04:05,711] [main] testng.in-memory = false [testng] [2024-03-15 02:04:05,711] [main] testng.allow-missing = false [testng] [2024-03-15 02:04:05,711] [main] user.language = en [testng] [2024-03-15 02:04:05,711] [main] user.country = ${user.country} [testng] [2024-03-15 02:04:05,711] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-03-15 02:04:07,905] [main] ---------------------------------------- [testng] [2024-03-15 02:04:07,905] [main] Total files: 203 [testng] [2024-03-15 02:04:07,905] [main] Scan time: 2.193 s (10 ms/file) [testng] [2024-03-15 02:04:07,905] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 202 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-03-15 02:05:01,406] [pool-1-thread-1] Initializing /data/public/2010-06/filter.ome.xml: [testng] 02:05:01,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:05:01,406 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:01,407 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-03-15_02-05-01.log] [testng] 02:05:01,407 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b604fcc - End of configuration. [testng] [2024-03-15 02:05:01,538] [pool-1-thread-12] Initializing /data/public/2011-06/multi-channel-z-series-time-series.ome.xml: [testng] 02:05:01,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:05:01,539 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:01,539 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-03-15_02-05-01.log] [testng] 02:05:01,540 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ea1e0e0 - End of configuration. [testng] [2024-03-15 02:05:01,665] [pool-1-thread-11] Initializing /data/public/2016-06/filter.ome.xml: [testng] 02:05:01,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:05:01,665 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:01,666 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-03-15_02-05-01.log] [testng] 02:05:01,666 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28971e7e - End of configuration. [testng] [2024-03-15 02:05:01,785] [pool-1-thread-10] Initializing /data/public/2015-01/minimum-specification.ome.xml: [testng] 02:05:01,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:05:01,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:01,786 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-03-15_02-05-01.log] [testng] 02:05:01,786 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4fba2419 - End of configuration. [testng] [2024-03-15 02:05:01,971] [pool-1-thread-9] Initializing /data/public/2015-01/two-screens-two-plates-four-wells.ome.xml: [testng] 02:05:01,971 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:05:01,971 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:01,971 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-03-15_02-05-01.log] [testng] 02:05:01,972 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24ea781e - End of configuration. [testng] [2024-03-15 02:05:02,174] [pool-1-thread-8] Initializing /data/public/2016-06/multi-channel-z-series-time-series.ome.xml: [testng] 02:05:02,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:05:02,175 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:02,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-03-15_02-05-02.log] [testng] 02:05:02,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f887e92 - End of configuration. [testng] [2024-03-15 02:05:02,319] [pool-1-thread-7] Initializing /data/public/2015-01/metadata-only.ome.xml: [testng] 02:05:02,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:05:02,319 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:02,319 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-03-15_02-05-02.log] [testng] 02:05:02,320 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63212c5d - End of configuration. [testng] [2024-03-15 02:05:02,436] [pool-1-thread-6] Initializing /data/public/2010-04/ROI.ome.xml: [testng] 02:05:02,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:05:02,437 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:02,437 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-03-15_02-05-02.log] [testng] 02:05:02,437 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22864719 - End of configuration. [testng] [2024-03-15 02:05:02,579] [pool-1-thread-5] Initializing /data/public/2016-06/xmlannotation-multi-value.ome.xml: [testng] 02:05:02,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:05:02,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:02,579 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-03-15_02-05-02.log] [testng] 02:05:02,580 |-INFO in ch.qos.logback.core.sift.SiftProcessor@785bd366 - End of configuration. [testng] [2024-03-15 02:05:02,717] [pool-1-thread-4] Initializing /data/public/2012-06/instrument.ome.xml: [testng] 02:05:02,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:05:02,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:02,718 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-03-15_02-05-02.log] [testng] 02:05:02,718 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c661cc8 - End of configuration. [testng] [2024-03-15 02:05:02,883] [pool-1-thread-3] Initializing /data/public/2011-06/transformations-upgrade.ome.xml: [testng] 02:05:02,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:05:02,883 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:02,884 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-03-15_02-05-02.log] [testng] 02:05:02,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c26d58f - End of configuration. [testng] [2024-03-15 02:05:03,071] [pool-1-thread-2] Initializing /data/samples/Sample-2008_02.ome: [testng] 02:05:03,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:05:03,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:05:03,072 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-03-15_02-05-03.log] [testng] 02:05:03,072 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c55ade3 - End of configuration. [testng] [2024-03-15 02:05:05,746] [pool-1-thread-7] Initializing /data/public/2010-06/single-image.ome.xml: [testng] [2024-03-15 02:05:05,883] [pool-1-thread-10] Initializing /data/public/2009-09/ROI.ome.xml: [testng] [2024-03-15 02:05:06,041] [pool-1-thread-11] Initializing /data/public/2016-06/z-series.ome.xml: [testng] [2024-03-15 02:05:06,177] [pool-1-thread-5] Initializing /data/samples/TAABA.ome: [testng] [2024-03-15 02:05:06,810] [pool-1-thread-1] Initializing /data/public/2010-04/instrument.ome.xml: [testng] [2024-03-15 02:05:06,979] [pool-1-thread-4] Initializing /data/public/2010-04/filter.ome.xml: [testng] [2024-03-15 02:05:07,119] [pool-1-thread-6] Initializing /data/public/2016-06/instrument-units-default.ome.xml: [testng] [2024-03-15 02:05:07,269] [pool-1-thread-12] Initializing /data/public/2012-06/time-series.ome.xml: [testng] [2024-03-15 02:05:07,436] [pool-1-thread-8] Initializing /data/public/2012-06/no-date.ome.xml: [testng] [2024-03-15 02:05:07,576] [pool-1-thread-3] Initializing /data/public/2010-06/xmlannotation-svg.ome.xml: [testng] [2024-03-15 02:05:07,715] [pool-1-thread-9] Initializing /data/public/2009-09/metadata-only.ome.xml: [testng] [2024-03-15 02:05:07,875] [pool-1-thread-2] Initializing /data/public/2010-06/multi-channel-time-series.ome.xml: [testng] [2024-03-15 02:05:09,667] [pool-1-thread-8] Initializing /data/public/2012-06/z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:09,834] [pool-1-thread-12] Initializing /data/public/2013-06/timestampannotation-posix-only.ome.xml: [testng] [2024-03-15 02:05:09,992] [pool-1-thread-4] Initializing /data/public/2010-06/instrument.ome.xml: [testng] [2024-03-15 02:05:10,133] [pool-1-thread-10] Initializing /data/public/2010-04/multi-channel.ome.xml: [testng] [2024-03-15 02:05:10,279] [pool-1-thread-7] Initializing /data/public/2012-06/z-series.ome.xml: [testng] [2024-03-15 02:05:10,435] [pool-1-thread-11] Initializing /data/public/2012-06/xmlannotation-svg.ome.xml: [testng] [2024-03-15 02:05:10,588] [pool-1-thread-1] Initializing /data/public/2011-06/z-series.ome.xml: [testng] [2024-03-15 02:05:10,737] [pool-1-thread-6] Initializing /data/public/2009-09/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-03-15 02:05:10,983] [pool-1-thread-3] Initializing /data/public/2011-06/metadata-only.ome.xml: [testng] [2024-03-15 02:05:11,132] [pool-1-thread-9] Initializing /data/public/2016-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-03-15 02:05:11,360] [pool-1-thread-2] Initializing /data/public/2013-06/xmlannotation-svg.ome.xml: [testng] [2024-03-15 02:05:13,013] [pool-1-thread-1] Initializing /data/public/2015-01/time-series.ome.xml: [testng] [2024-03-15 02:05:13,137] [pool-1-thread-3] Initializing /data/public/2015-01/transformations-downgrade.ome.xml: [testng] [2024-03-15 02:05:13,273] [pool-1-thread-7] Initializing /data/public/2012-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:13,406] [pool-1-thread-8] Initializing /data/public/2016-06/xmlannotation-body-space.ome.xml: [testng] [2024-03-15 02:05:13,515] [pool-1-thread-4] Initializing /data/public/2015-01/multi-channel-time-series.ome.xml: [testng] [2024-03-15 02:05:13,734] [pool-1-thread-11] Initializing /data/public/2010-06/ROI.ome.xml: [testng] [2024-03-15 02:05:13,885] [pool-1-thread-2] Initializing /data/public/2013-06/no-date.ome.xml: [testng] [2024-03-15 02:05:14,030] [pool-1-thread-10] Initializing /data/public/2016-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-03-15 02:05:14,256] [pool-1-thread-12] Initializing /data/public/2016-06/folders-simple-taxonomy.ome.xml: [testng] [2024-03-15 02:05:14,439] [pool-1-thread-6] Initializing /data/samples/Sample-2003-custom-ST.ome: [testng] [2024-03-15 02:05:14,645] [pool-1-thread-9] Initializing /data/public/2015-01/no-date.ome.xml: [testng] [2024-03-15 02:05:14,950] [pool-1-thread-5] Initializing /data/public/2010-06/no-date.ome.xml: [testng] [2024-03-15 02:05:16,333] [pool-1-thread-8] Initializing /data/public/2009-09/time-series.ome.xml: [testng] [2024-03-15 02:05:16,499] [pool-1-thread-1] Initializing /data/public/2013-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-03-15 02:05:16,709] [pool-1-thread-2] Initializing /data/public/2008-09/multi-channel.ome.xml: [testng] [2024-03-15 02:05:16,884] [pool-1-thread-9] Initializing /data/public/2009-09/multi-channel.ome.xml: [testng] [2024-03-15 02:05:17,025] [pool-1-thread-4] Initializing /data/public/2013-06/z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:17,144] [pool-1-thread-7] Initializing /data/public/2012-06/transformations-downgrade.ome.xml: [testng] [2024-03-15 02:05:17,294] [pool-1-thread-3] Initializing /data/public/2012-06/filter.ome.xml: [testng] [2024-03-15 02:05:17,446] [pool-1-thread-11] Initializing /data/curtis/black0.tif: [testng] [2024-03-15 02:05:18,240] [pool-1-thread-10] Initializing /data/public/2013-06/instrument.ome.xml: [testng] [2024-03-15 02:05:18,378] [pool-1-thread-6] Initializing /data/public/2016-06/instrument.ome.xml: [testng] [2024-03-15 02:05:18,525] [pool-1-thread-12] Initializing /data/public/2010-06/spim.ome.xml: [testng] [2024-03-15 02:05:18,745] [pool-1-thread-5] Initializing /data/public/2013-06/xmlannotation-body-space.ome.xml: [testng] [2024-03-15 02:05:20,364] [pool-1-thread-5] Initializing /data/public/2009-09/multi-channel-time-series.ome.xml: [testng] [2024-03-15 02:05:20,564] [pool-1-thread-8] Initializing /data/public/2013-06/transformations-downgrade.ome.xml: [testng] [2024-03-15 02:05:20,716] [pool-1-thread-9] Initializing /data/public/2016-06/minimum-specification.ome.xml: [testng] [2024-03-15 02:05:20,861] [pool-1-thread-2] Initializing /data/public/2010-06/metadata-only.ome.xml: [testng] [2024-03-15 02:05:21,030] [pool-1-thread-4] Initializing /data/public/2009-09/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-03-15 02:05:21,199] [pool-1-thread-3] Initializing /data/public/2011-06/ROI.ome.xml: [testng] [2024-03-15 02:05:21,322] [pool-1-thread-10] Initializing /data/public/2011-06/no-date.ome.xml: [testng] [2024-03-15 02:05:21,453] [pool-1-thread-6] Initializing /data/public/2015-01/instrument-units-alternate.ome.xml: [testng] [2024-03-15 02:05:21,607] [pool-1-thread-1] Initializing /data/public/2016-06/transformations-upgrade.ome.xml: [testng] [2024-03-15 02:05:21,774] [pool-1-thread-7] Initializing /data/public/2010-06/time-series.ome.xml: [testng] [2024-03-15 02:05:22,155] [pool-1-thread-12] Initializing /data/public/2008-09/z-series.ome.xml: [testng] [2024-03-15 02:05:22,864] [pool-1-thread-5] Initializing /data/public/2015-01/filter.ome.xml: [testng] [2024-03-15 02:05:23,394] [pool-1-thread-9] Initializing /data/public/2015-01/timestampannotation-posix-only.ome.xml: [testng] [2024-03-15 02:05:23,547] [pool-1-thread-3] Initializing /data/public/2016-06/timestampannotation.ome.xml: [testng] [2024-03-15 02:05:23,701] [pool-1-thread-7] Initializing /data/public/2016-06/mapannotation.ome.xml: [testng] [2024-03-15 02:05:23,837] [pool-1-thread-10] Initializing /data/public/2013-06/multi-channel-time-series.ome.xml: [testng] [2024-03-15 02:05:23,999] [pool-1-thread-6] Initializing /data/public/2010-06/multi-channel-z-series.ome.xml: [testng] [2024-03-15 02:05:24,201] [pool-1-thread-8] Initializing /data/public/2012-06/transformations-upgrade.ome.xml: [testng] [2024-03-15 02:05:24,412] [pool-1-thread-1] Initializing /data/public/2010-04/multi-channel-z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:24,605] [pool-1-thread-2] Initializing /data/public/2016-06/commentannotation.ome.xml: [testng] [2024-03-15 02:05:24,754] [pool-1-thread-4] Initializing /data/public/2016-06/no-date.ome.xml: [testng] [2024-03-15 02:05:24,910] [pool-1-thread-12] Initializing /data/curtis/black6-7.ome: [testng] [2024-03-15 02:05:25,231] [pool-1-thread-11] Initializing /data/public/2013-06/ROI.ome.xml: [testng] [2024-03-15 02:05:25,893] [pool-1-thread-7] Initializing /data/public/2013-06/commentannotation.ome.xml: [testng] [2024-03-15 02:05:26,105] [pool-1-thread-10] Initializing /data/public/2013-06/filter.ome.xml: [testng] [2024-03-15 02:05:26,263] [pool-1-thread-5] Initializing /data/public/2010-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-03-15 02:05:26,513] [pool-1-thread-3] Initializing /data/public/2010-06/z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:26,681] [pool-1-thread-9] Initializing /data/public/2015-01/z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:26,966] [pool-1-thread-2] Initializing /data/public/2016-06/ROI.ome.xml: [testng] [2024-03-15 02:05:27,120] [pool-1-thread-6] Initializing /data/public/2015-01/instrument-units-default.ome.xml: [testng] [2024-03-15 02:05:27,303] [pool-1-thread-4] Initializing /data/samples/Sample-2003_FC.ome: [testng] [2024-03-15 02:05:27,536] [pool-1-thread-8] Initializing /data/public/2009-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:27,946] [pool-1-thread-1] Initializing /data/public/2010-06/z-series.ome.xml: [testng] [2024-03-15 02:05:28,458] [pool-1-thread-11] Initializing /data/public/2015-01/multi-channel-z-series.ome.xml: [testng] [2024-03-15 02:05:28,758] [pool-1-thread-7] Initializing /data/public/2011-06/instrument.ome.xml: [testng] [2024-03-15 02:05:28,927] [pool-1-thread-9] Initializing /data/public/2013-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:29,082] [pool-1-thread-10] Initializing /data/public/2016-06/metadata-only.ome.xml: [testng] [2024-03-15 02:05:29,200] [pool-1-thread-3] Initializing /data/public/2015-01/xmlannotation-body-space.ome.xml: [testng] [2024-03-15 02:05:29,333] [pool-1-thread-12] Initializing /data/public/2011-06/multi-channel-time-series.ome.xml: [testng] [2024-03-15 02:05:29,565] [pool-1-thread-5] Initializing /data/curtis/all-black.tif: [testng] [2024-03-15 02:05:30,648] [pool-1-thread-2] Initializing /data/public/2015-01/xmlannotation-multi-value.ome.xml: [testng] [2024-03-15 02:05:30,817] [pool-1-thread-6] Initializing /data/public/2010-04/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-03-15 02:05:31,019] [pool-1-thread-4] Initializing /data/public/2012-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-03-15 02:05:31,212] [pool-1-thread-8] Initializing /data/public/2008-09/multi-channel-time-series.ome.xml: [testng] [2024-03-15 02:05:31,349] [pool-1-thread-1] Initializing /data/public/2010-04/multi-channel-z-series.ome.xml: [testng] [2024-03-15 02:05:31,476] [pool-1-thread-11] Initializing /data/public/2009-09/z-series.ome.xml: [testng] [2024-03-15 02:05:32,140] [pool-1-thread-3] Initializing /data/mario/Hoechst_ND - n000000.ome: [testng] [2024-03-15 02:05:32,349] [pool-1-thread-12] Initializing /data/public/2008-09/multi-channel-z-series.ome.xml: [testng] [2024-03-15 02:05:32,517] [pool-1-thread-7] Initializing /data/public/2009-09/single-image.ome.xml: [testng] [2024-03-15 02:05:32,684] [pool-1-thread-10] Initializing /data/public/2016-06/instrument-units-alternate.ome.xml: [testng] [2024-03-15 02:05:32,846] [pool-1-thread-9] Initializing /data/public/2016-06/single-image.ome.xml: [testng] [2024-03-15 02:05:33,750] [pool-1-thread-2] Initializing /data/public/2013-06/tagannotation.ome.xml: [testng] [2024-03-15 02:05:33,922] [pool-1-thread-8] Initializing /data/public/2015-01/multi-channel.ome.xml: [testng] [2024-03-15 02:05:34,120] [pool-1-thread-1] Initializing /data/public/2013-06/xmlannotation-multi-value.ome.xml: [testng] [2024-03-15 02:05:34,306] [pool-1-thread-11] Initializing /data/public/2015-01/z-series.ome.xml: [testng] [2024-03-15 02:05:34,457] [pool-1-thread-4] Initializing /data/samples/Sample-2007_06.ome: [testng] [2024-03-15 02:05:34,661] [pool-1-thread-6] Initializing /data/curtis/all-black.ome: [testng] [2024-03-15 02:05:35,280] [pool-1-thread-9] Initializing /data/public/2009-09/instrument.ome.xml: [testng] [2024-03-15 02:05:35,477] [pool-1-thread-7] Initializing /data/public/2015-01/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-03-15 02:05:35,686] [pool-1-thread-12] Initializing /data/public/2010-04/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-03-15 02:05:35,967] [pool-1-thread-10] Initializing /data/public/2010-04/time-series.ome.xml: [testng] [2024-03-15 02:05:36,117] [pool-1-thread-5] Initializing /data/public/2012-06/ROI.ome.xml: [testng] [2024-03-15 02:05:36,317] [pool-1-thread-2] Initializing /data/public/2015-01/single-image.ome.xml: [testng] [2024-03-15 02:05:37,144] [pool-1-thread-1] Initializing /data/public/2008-09/dataset-group-project.ome.xml: [testng] [2024-03-15 02:05:37,291] [pool-1-thread-8] Initializing /data/public/2016-06/spim.ome.xml: [testng] [2024-03-15 02:05:37,461] [pool-1-thread-11] Initializing /data/public/2012-06/multi-channel-time-series.ome.xml: [testng] [2024-03-15 02:05:37,662] [pool-1-thread-6] Initializing /data/public/2015-01/ROI.ome.xml: [testng] [2024-03-15 02:05:37,834] [pool-1-thread-9] Initializing /data/public/2013-06/timestampannotation.ome.xml: [testng] [2024-03-15 02:05:38,010] [pool-1-thread-4] Initializing /data/public/2016-06/multi-channel-time-series.ome.xml: [testng] [2024-03-15 02:05:38,164] [pool-1-thread-10] Initializing /data/public/2011-06/multi-channel-z-series.ome.xml: [testng] [2024-03-15 02:05:38,356] [pool-1-thread-3] Initializing /data/public/2010-04/multi-channel-time-series.ome.xml: [testng] [2024-03-15 02:05:38,527] [pool-1-thread-7] Initializing /data/public/2009-09/multi-channel-z-series.ome.xml: [testng] [2024-03-15 02:05:38,764] [pool-1-thread-12] Initializing /data/curtis/black0.ome: [testng] [2024-03-15 02:05:39,525] [pool-1-thread-2] Initializing /data/public/2012-06/multi-channel.ome.xml: [testng] [2024-03-15 02:05:39,683] [pool-1-thread-5] Initializing /data/public/2015-01/multi-channel-z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:39,894] [pool-1-thread-1] Initializing /data/sandeep/synth_rbc.ome: [testng] [2024-03-15 02:05:40,222] [pool-1-thread-8] Initializing /data/public/2010-06/multi-channel.ome.xml: [testng] [2024-03-15 02:05:40,383] [pool-1-thread-4] Initializing /data/public/2013-06/transformations-upgrade.ome.xml: [testng] [2024-03-15 02:05:40,541] [pool-1-thread-6] Initializing /data/public/2016-06/transformations-downgrade.ome.xml: [testng] [2024-03-15 02:05:40,696] [pool-1-thread-9] Initializing /data/samples/testImportPlateMultiplePlateAcquisitions1508.ome: [testng] [2024-03-15 02:05:40,960] [pool-1-thread-11] Initializing /data/public/2013-06/multi-channel.ome.xml: [testng] [2024-03-15 02:05:41,595] [pool-1-thread-10] Initializing /data/public/2011-06/z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:41,771] [pool-1-thread-7] Initializing /data/public/2012-06/single-image.ome.xml: [testng] [2024-03-15 02:05:41,942] [pool-1-thread-3] Initializing /data/public/2008-09/time-series.ome.xml: [testng] [2024-03-15 02:05:42,137] [pool-1-thread-5] Initializing /data/public/2015-01/mapannotation.ome.xml: [testng] [2024-03-15 02:05:42,320] [pool-1-thread-2] Initializing /data/public/2008-09/multi-channel-z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:42,735] [pool-1-thread-12] Initializing /data/public/2013-06/z-series.ome.xml: [testng] [2024-03-15 02:05:43,115] [pool-1-thread-11] Initializing /data/public/2009-09/z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:43,314] [pool-1-thread-8] Initializing /data/public/2015-01/spim.ome.xml: [testng] [2024-03-15 02:05:43,492] [pool-1-thread-6] Initializing /data/johannes/20100625_W3_Ppac_8.ome: [testng] [2024-03-15 02:05:43,663] [pool-1-thread-4] Initializing /data/public/2016-06/folders-larger-taxonomy.ome.xml: [testng] [2024-03-15 02:05:43,872] [pool-1-thread-10] Initializing /data/samples/sdub.ome: [testng] [2024-03-15 02:05:44,156] [pool-1-thread-9] Initializing /data/public/2008-09/instrument.ome.xml: [testng] [2024-03-15 02:05:44,455] [pool-1-thread-1] Initializing /data/public/2011-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-03-15 02:05:44,944] [pool-1-thread-7] Initializing /data/samples/Antarctic_Diatom_D3D_01.ome: [testng] [2024-03-15 02:05:45,420] [pool-1-thread-3] Initializing /data/public/2008-09/multi-pixel-default.ome.xml: [testng] [2024-03-15 02:05:45,575] [pool-1-thread-5] Initializing /data/public/2011-06/multi-channel.ome.xml: [testng] [2024-03-15 02:05:45,717] [pool-1-thread-2] Initializing /data/public/2016-06/multi-channel.ome.xml: [testng] [2024-03-15 02:05:45,847] [pool-1-thread-12] Initializing /data/public/2013-06/time-series.ome.xml: [testng] [2024-03-15 02:05:46,758] [pool-1-thread-11] Initializing /data/public/2010-06/multi-channel-z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:46,963] [pool-1-thread-8] Initializing /data/public/2012-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-03-15 02:05:47,153] [pool-1-thread-9] Initializing /data/public/2008-09/z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:47,303] [pool-1-thread-4] Initializing /data/public/2013-06/multi-channel-z-series.ome.xml: [testng] [2024-03-15 02:05:47,425] [pool-1-thread-1] Initializing /data/public/2016-06/hcs.ome.xml: [testng] [2024-03-15 02:05:47,547] [pool-1-thread-6] Initializing /data/public/2015-01/commentannotation.ome.xml: [testng] [2024-03-15 02:05:47,723] [pool-1-thread-10] Initializing /data/public/2010-04/single-image.ome.xml: [testng] [2024-03-15 02:05:48,282] [pool-1-thread-2] Initializing /data/public/2013-06/single-image.ome.xml: [testng] [2024-03-15 02:05:48,409] [pool-1-thread-5] Initializing /data/public/2016-06/xmlannotation-svg.ome.xml: [testng] [2024-03-15 02:05:48,541] [pool-1-thread-12] Initializing /data/curtis/black6-7.tif: [testng] [2024-03-15 02:05:49,391] [pool-1-thread-3] Initializing /data/public/2011-06/spim.ome.xml: [testng] [2024-03-15 02:05:49,744] [pool-1-thread-11] Initializing /data/public/2016-06/time-series.ome.xml: [testng] [2024-03-15 02:05:50,097] [pool-1-thread-8] Initializing /data/public/2010-04/metadata-only.ome.xml: [testng] [2024-03-15 02:05:50,837] [pool-1-thread-6] Initializing /data/public/2012-06/spim.ome.xml: [testng] [2024-03-15 02:05:51,017] [pool-1-thread-4] Initializing /data/public/2015-01/transformations-upgrade.ome.xml: [testng] [2024-03-15 02:05:51,239] [pool-1-thread-9] Initializing /data/public/2015-01/instrument.ome.xml: [testng] [2024-03-15 02:05:51,394] [pool-1-thread-7] Initializing /data/mario/Hoechst_ND - n000000.tif: [testng] [2024-03-15 02:05:52,001] [pool-1-thread-10] Initializing /data/public/2011-06/time-series.ome.xml: [testng] [2024-03-15 02:05:52,101] [pool-1-thread-1] Initializing /data/public/2012-06/tagannotation.ome.xml: [testng] [2024-03-15 02:05:52,783] [pool-1-thread-2] Initializing /data/public/2016-06/multi-channel-z-series.ome.xml: [testng] [2024-03-15 02:05:52,936] [pool-1-thread-5] Initializing /data/public/2016-06/timestampannotation-posix-only.ome.xml: [testng] [2024-03-15 02:05:53,080] [pool-1-thread-3] Initializing /data/public/2015-01/xmlannotation-svg.ome.xml: [testng] [2024-03-15 02:05:53,326] [pool-1-thread-11] Initializing /data/public/2012-06/metadata-only.ome.xml: [testng] [2024-03-15 02:05:53,473] [pool-1-thread-8] Initializing /data/public/2016-06/tagannotation.ome.xml: [testng] [2024-03-15 02:05:54,186] [pool-1-thread-1] Initializing /data/public/2013-06/two-screens-two-plates-four-wells.ome.xml: [testng] [2024-03-15 02:05:54,464] [pool-1-thread-10] Initializing /data/public/2011-06/single-image.ome.xml: [testng] [2024-03-15 02:05:54,606] [pool-1-thread-4] Initializing /data/public/2015-01/hcs.ome.xml: [testng] [2024-03-15 02:05:54,716] [pool-1-thread-9] Initializing /data/public/2013-06/metadata-only.ome.xml: [testng] [2024-03-15 02:05:54,867] [pool-1-thread-6] Initializing /data/public/2011-06/xmlannotation-svg.ome.xml: [testng] [2024-03-15 02:05:55,522] [pool-1-thread-11] Initializing /data/public/2015-01/tagannotation.ome.xml: [testng] [2024-03-15 02:05:55,685] [pool-1-thread-3] Initializing /data/public/2015-01/timestampannotation.ome.xml: [testng] [2024-03-15 02:05:55,822] [pool-1-thread-2] Initializing /data/public/2011-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-03-15 02:05:55,947] [pool-1-thread-5] Initializing /data/public/2011-06/filter.ome.xml: [testng] [2024-03-15 02:05:56,053] [pool-1-thread-8] Initializing /data/public/2010-04/z-series-time-series.ome.xml: [testng] [2024-03-15 02:05:56,196] [pool-1-thread-12] Initializing /data/melissa/large-xml-test.ome: [testng] [2024-03-15 02:06:04,599] [pool-1-thread-9] Initializing /data/curtis/min-sample-2008-02.ome: [testng] [2024-03-15 02:06:04,763] [pool-1-thread-10] Initializing /data/public/2012-06/multi-channel-z-series.ome.xml: [testng] [2024-03-15 02:06:04,934] [pool-1-thread-1] Initializing /data/public/2013-06/spim.ome.xml: [testng] [2024-03-15 02:06:05,162] [pool-1-thread-4] Initializing /data/public/2008-09/multi-pixel-aquired.ome.xml: [testng] [2024-03-15 02:06:05,318] [pool-1-thread-6] Initializing /data/public/2008-09/single-image.ome.xml: [testng] [2024-03-15 02:06:05,473] [pool-1-thread-11] Initializing /data/public/2010-06/one-screen-one-plate-four-wells.ome.xml: [testng] [2024-03-15 02:06:05,654] [pool-1-thread-2] Initializing /data/public/2016-06/z-series-time-series.ome.xml: [testng] [2024-03-15 02:06:05,789] [pool-1-thread-8] Initializing /data/public/2010-04/z-series.ome.xml: [testng] [2024-03-15 02:06:06,004] [pool-1-thread-5] Initializing /data/samples/test.OME: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10706, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 2 minutes 49 seconds Finished: SUCCESS