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Started by upstream project "BIOFORMATS-test-repo" build number 186 originally caused by: Started by upstream project "Trigger" build number 208 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins18296293453622143326.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_29348_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:50,414 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:50,416 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 01:21:50,416 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:50,417 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:50,417 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:50,417 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:50,418 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:50,418 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:50,419 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:50,419 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:50,420 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:50,420 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:50,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:50,599 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:50,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:50,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:50,643 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:50,643 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:50,644 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:50,644 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:50,644 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 01:21:50,645 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 01:21:50,645 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 227 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-12 01:21:50,659] [main] java.version = 21 [testng] 01:21:50,663 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:50,664 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:50,723 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-12_01-21-50.log] [testng] 01:21:50,725 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-09-12 01:21:50,726] [main] testng.directory = /data [testng] [2024-09-12 01:21:50,727] [main] testng.configDirectory = /config [testng] [2024-09-12 01:21:50,742] [main] testng.multiplier = 1.0 [testng] [2024-09-12 01:21:50,742] [main] testng.in-memory = false [testng] [2024-09-12 01:21:50,742] [main] testng.allow-missing = false [testng] [2024-09-12 01:21:50,742] [main] user.language = en [testng] [2024-09-12 01:21:50,743] [main] user.country = ${user.country} [testng] [2024-09-12 01:21:50,743] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-09-12 01:22:16,341] [main] ---------------------------------------- [testng] [2024-09-12 01:22:16,341] [main] Total files: 4426 [testng] [2024-09-12 01:22:16,341] [main] Scan time: 25.598 s (5 ms/file) [testng] [2024-09-12 01:22:16,342] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-12 01:24:53,065] [pool-1-thread-1] Initializing /data/julien/MarjorieCoisy1.TIF: [testng] 01:24:53,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:24:53,066 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:53,067 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-12_01-24-53.log] [testng] 01:24:53,068 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b2d5b3b - End of configuration. [testng] [2024-09-12 01:24:53,261] [pool-1-thread-12] Initializing /data/ascb/bad/FND-18_FawcettGolgi_4800.tif: [testng] 01:24:53,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:24:53,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:53,262 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-12_01-24-53.log] [testng] 01:24:53,263 |-INFO in ch.qos.logback.core.sift.SiftProcessor@606fa344 - End of configuration. [testng] [2024-09-12 01:24:53,449] [pool-1-thread-11] Initializing /data/public/libtiff/dscf0013.tif: [testng] 01:24:53,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:24:53,449 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:53,449 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-12_01-24-53.log] [testng] 01:24:53,450 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63c32575 - End of configuration. [testng] [2024-09-12 01:24:53,523] [pool-1-thread-10] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] 01:24:53,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:24:53,523 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:53,524 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-12_01-24-53.log] [testng] 01:24:53,525 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22c766b3 - End of configuration. [testng] [2024-09-12 01:24:53,633] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] 01:24:53,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:24:53,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:53,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-12_01-24-53.log] [testng] 01:24:53,635 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39951448 - End of configuration. [testng] [2024-09-12 01:24:53,772] [pool-1-thread-8] Initializing /data/josiah/cell-Z16.C0.tiff: [testng] 01:24:53,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:24:53,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:53,773 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-12_01-24-53.log] [testng] 01:24:53,773 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ea56230 - End of configuration. [testng] [2024-09-12 01:24:53,928] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] 01:24:53,928 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:24:53,929 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:53,929 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-12_01-24-53.log] [testng] 01:24:53,930 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47a017e8 - End of configuration. [testng] [2024-09-12 01:24:53,984] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] 01:24:53,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:24:53,984 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:53,985 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-12_01-24-53.log] [testng] 01:24:53,985 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f728960 - End of configuration. [testng] [2024-09-12 01:24:54,034] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] 01:24:54,034 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:24:54,035 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,035 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-12_01-24-54.log] [testng] 01:24:54,036 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c009a5b - End of configuration. [testng] [2024-09-12 01:24:54,098] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z006.tif: [testng] 01:24:54,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:24:54,098 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,098 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-12_01-24-54.log] [testng] 01:24:54,099 |-INFO in ch.qos.logback.core.sift.SiftProcessor@341209ba - End of configuration. [testng] [2024-09-12 01:24:54,184] [pool-1-thread-3] Initializing /data/samples/cielab/SKI_TC803_rel.tif: [testng] 01:24:54,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:24:54,184 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,185 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-12_01-24-54.log] [testng] 01:24:54,185 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24c027c1 - End of configuration. [testng] [2024-09-12 01:24:54,298] [pool-1-thread-2] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] 01:24:54,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:24:54,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:24:54,300 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-12_01-24-54.log] [testng] 01:24:54,301 |-INFO in ch.qos.logback.core.sift.SiftProcessor@293377ae - End of configuration. [testng] [2024-09-12 01:24:56,762] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z030.tif: [testng] [2024-09-12 01:24:56,808] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z028.tif: [testng] [2024-09-12 01:24:56,854] [pool-1-thread-6] Initializing /data/public/libtiff/strike.tif: [testng] [2024-09-12 01:24:56,916] [pool-1-thread-8] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-09-12 01:24:56,982] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-09-12 01:24:57,033] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0252.TIF: [testng] [2024-09-12 01:24:57,148] [pool-1-thread-9] Initializing /data/tom-kazimiers/crop_two_chan.tiff: [testng] [2024-09-12 01:24:57,405] [pool-1-thread-2] Initializing /data/big-images/2kx2k.tif: [testng] [2024-09-12 01:24:57,585] [pool-1-thread-1] Initializing /data/stephane/001_z01.tif: [testng] [2024-09-12 01:24:58,047] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] [2024-09-12 01:24:58,136] [pool-1-thread-4] Initializing /data/qa-7589/CalGrid2.tif: [testng] [2024-09-12 01:24:58,210] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z029.tif: [testng] [2024-09-12 01:24:58,285] [pool-1-thread-9] Initializing /data/samples/melissa/imagej-4gb/4gb-test&sizeX=1024&sizeY=1024&pixelType=uint16&sizeC=2050.fake: [testng] [2024-09-12 01:24:58,314] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-09-12 01:24:58,393] [pool-1-thread-5] Initializing /data/curtis/map/brown-fox: [testng] [2024-09-12 01:24:58,691] [pool-1-thread-8] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-09-12 01:24:58,874] [pool-1-thread-11] Initializing /data/ascb/CYT-90_PasolliMousePanoramic_4800.tif: [testng] [2024-09-12 01:24:59,527] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z027.tif: [testng] [2024-09-12 01:24:59,769] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips_fourteen.tiff: [testng] [2024-09-12 01:24:59,819] [pool-1-thread-7] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-09-12 01:24:59,886] [pool-1-thread-1] Initializing /data/public/condensation/B12.pattern1.tif: [testng] [2024-09-12 01:24:59,943] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-09-12 01:25:00,038] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z052.tif: [testng] [2024-09-12 01:25:00,134] [pool-1-thread-8] Initializing /data/julien/CRBMquadtour.tif: [testng] [2024-09-12 01:25:04,286] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0221.TIF: [testng] [2024-09-12 01:25:04,521] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z010.tif: [testng] [2024-09-12 01:25:04,868] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z059.tif: [testng] [2024-09-12 01:25:05,120] [pool-1-thread-3] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-09-12 01:25:05,262] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-09-12 01:25:05,319] [pool-1-thread-1] Initializing /data/jae/Second image.tif: [testng] [2024-09-12 01:25:05,402] [pool-1-thread-5] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-09-12 01:25:05,714] [pool-1-thread-7] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs011.TIF: [testng] [2024-09-12 01:25:05,858] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x64.tiff: [testng] [2024-09-12 01:25:06,070] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-09-12 01:25:06,131] [pool-1-thread-6] Initializing /data/victoria/scan4_1hr_20X_.352g_n180p_2z_0.387644res_9int_C2_TP1.tiff: [testng] [2024-09-12 01:25:06,286] [pool-1-thread-9] Initializing /data/jae/frogeggs.tif: [testng] [2024-09-12 01:25:06,534] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-05.tiff: [testng] [2024-09-12 01:25:06,624] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z057.tif: [testng] [2024-09-12 01:25:06,796] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z062.tif: [testng] [2024-09-12 01:25:06,868] [pool-1-thread-5] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-09-12 01:25:06,977] [pool-1-thread-2] Initializing /data/public/libtiff/jim___ah.tif: [testng] [2024-09-12 01:25:07,523] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z052.tif: [testng] [2024-09-12 01:25:07,695] [pool-1-thread-10] Initializing /data/josiah/cell-Z5.C1.tiff: [testng] [2024-09-12 01:25:07,816] [pool-1-thread-3] Initializing /data/ascb/FND-25a_PaladeGroupLabeled_4800.tif: [testng] [2024-09-12 01:25:09,707] [pool-1-thread-4] Initializing /data/boguslaw/Arabidopsis.tiff: [testng] [2024-09-12 01:25:09,976] [pool-1-thread-1] Initializing 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[testng] [2024-09-12 01:25:42,600] [pool-1-thread-5] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-09-12 01:25:43,086] [pool-1-thread-3] Initializing /data/josiah/cell-Z23.C0.tiff: [testng] [2024-09-12 01:25:43,388] [pool-1-thread-7] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [2024-09-12 01:25:43,570] [pool-1-thread-11] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-09-12 01:25:43,687] [pool-1-thread-12] Initializing /data/misc/mri-new.mov: [testng] [2024-09-12 01:25:43,723] [pool-1-thread-1] Initializing /data/christine/Image5D_4color test stack/test stack.tif: [testng] [2024-09-12 01:25:43,833] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0233.TIF: [testng] [2024-09-12 01:25:44,025] [pool-1-thread-9] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-09-12 01:25:44,565] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z025.tif: [testng] [2024-09-12 01:25:44,656] [pool-1-thread-3] Initializing 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[pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z008.tif: [testng] [2024-09-12 01:27:45,514] [pool-1-thread-5] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-09-12 01:27:46,251] [pool-1-thread-11] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-09-12 01:27:47,267] [pool-1-thread-12] Initializing /data/stephane/d01&007.tif: [testng] [2024-09-12 01:27:47,531] [pool-1-thread-8] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-09-12 01:27:47,739] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x32.tiff: [testng] [2024-09-12 01:27:48,422] [pool-1-thread-5] Initializing /data/ascb/CYT-43_HowellAcinarUnlabeled_4800.tif: [testng] [2024-09-12 01:27:48,931] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-09-12 01:27:49,176] [pool-1-thread-7] Initializing /data/jay/Cleared%2fStack.tif: [testng] [2024-09-12 01:27:49,295] [pool-1-thread-6] Initializing /data/kevino/_BF_00001.tif: [testng] [2024-09-12 01:27:49,464] [pool-1-thread-10] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-09-12 01:27:49,752] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs012.TIF: [testng] [2024-09-12 01:27:50,061] [pool-1-thread-8] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-09-12 01:27:51,323] [pool-1-thread-7] Initializing /data/qa-5004/ID4118_21_uncuff_10x_HE.tif: [testng] [2024-09-12 01:27:51,542] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-09-12 01:27:51,633] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z028.tif: [testng] [2024-09-12 01:27:51,887] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x64.tiff: [testng] [2024-09-12 01:27:52,068] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z000.tif: [testng] [2024-09-12 01:27:52,628] [pool-1-thread-3] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-09-12 01:27:53,183] [pool-1-thread-12] Initializing /data/misc/mri-old.mov: [testng] [2024-09-12 01:27:53,461] [pool-1-thread-6] Initializing /data/brian/datamanager.tiff: [testng] [2024-09-12 01:27:53,643] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-09-12 01:27:53,824] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z059.tif: [testng] [2024-09-12 01:27:53,979] [pool-1-thread-12] Initializing /data/josiah/cell-Z27.C0.tiff: [testng] [2024-09-12 01:27:54,529] [pool-1-thread-3] Initializing /data/josiah/cell-Z30.C1.tiff: [testng] [2024-09-12 01:27:54,600] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z002.tif: [testng] [2024-09-12 01:27:54,715] [pool-1-thread-1] Initializing /data/lzw/test.tif: [testng] [2024-09-12 01:27:54,790] [pool-1-thread-11] Initializing 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/data/glen/742015a20x3middle16bit.tif: [testng] [2024-09-12 01:27:57,503] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-09-12 01:27:57,585] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z030.tif: [testng] [2024-09-12 01:27:57,720] [pool-1-thread-11] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-09-12 01:27:57,821] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-09-12 01:27:58,032] [pool-1-thread-1] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-09-12 01:27:58,164] [pool-1-thread-10] Initializing /data/qa-4054/NM80 Plato R) calb pul.tif: [testng] [2024-09-12 01:27:58,661] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z015.tif: [testng] [2024-09-12 01:27:59,070] [pool-1-thread-6] Initializing /data/qa-4745/LIBPB476_Figure 1_H_NA_21879.tiff: [testng] [2024-09-12 01:27:59,157] [pool-1-thread-12] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-09-12 01:27:59,246] [pool-1-thread-2] Initializing /data/ascb/CYT-92_PasolliMouse1b_4800.tif: [testng] [2024-09-12 01:27:59,413] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z006.tif: [testng] [2024-09-12 01:27:59,926] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z054.tif: [testng] [2024-09-12 01:28:00,321] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z056.tif: [testng] [2024-09-12 01:28:00,489] [pool-1-thread-9] Initializing /data/josiah/cell-Z26.C0.tiff: [testng] [2024-09-12 01:28:00,766] [pool-1-thread-1] Initializing /data/ascb/bad/FND-17_FawcettNucleus_4800.tif: [testng] [2024-09-12 01:28:00,949] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z036.tif: [testng] [2024-09-12 01:28:01,059] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0247.TIF: [testng] [2024-09-12 01:28:01,159] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-09-12 01:28:01,279] [pool-1-thread-3] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] [2024-09-12 01:28:01,743] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] [2024-09-12 01:28:02,040] [pool-1-thread-4] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-09-12 01:28:02,178] [pool-1-thread-12] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-09-12 01:28:02,296] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x32.tiff: [testng] [2024-09-12 01:28:02,375] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern5.tif: [testng] [2024-09-12 01:28:02,772] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z037.tif: [testng] [2024-09-12 01:28:02,919] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-09-12 01:28:03,376] [pool-1-thread-7] Initializing /data/jae/first image.tif: [testng] [2024-09-12 01:28:03,455] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs008.TIF: [testng] [2024-09-12 01:28:03,583] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z014.tif: [testng] [2024-09-12 01:28:03,649] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-09-12 01:28:03,947] [pool-1-thread-11] Initializing /data/ascb/FND-27_PaladeGolgi_4800.tif: [testng] [2024-09-12 01:28:04,387] [pool-1-thread-10] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-09-12 01:28:04,586] [pool-1-thread-6] Initializing /data/josiah/cell-Z28.C0.tiff: [testng] [2024-09-12 01:28:04,979] [pool-1-thread-7] Initializing /data/josh/NESb_C2_TP10.tiff: [testng] [2024-09-12 01:28:05,264] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z005.tif: [testng] [2024-09-12 01:28:05,347] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-09-12 01:28:05,666] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z008.tif: [testng] [2024-09-12 01:28:05,769] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z005.tif: [testng] [2024-09-12 01:28:05,970] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-09-12 01:28:06,219] [pool-1-thread-5] Initializing /data/josiah/cell-Z7.C0.tiff: [testng] [2024-09-12 01:28:06,366] [pool-1-thread-4] Initializing /data/public/condensation/C4.pattern7.tif: [testng] [2024-09-12 01:28:06,531] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-32.tiff: [testng] [2024-09-12 01:28:06,617] [pool-1-thread-7] Initializing /data/brian/Alx-488-pk.tif: [testng] [2024-09-12 01:28:06,676] [pool-1-thread-9] Initializing /data/public/condensation/C4.pattern9.tif: [testng] [2024-09-12 01:28:06,860] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-09-12 01:28:07,565] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0258.TIF: [testng] [2024-09-12 01:28:07,678] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z016.tif: [testng] [2024-09-12 01:28:07,766] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z013.tif: [testng] [2024-09-12 01:28:07,924] [pool-1-thread-4] Initializing /data/idr0043/141893_A_1_1.tif: [testng] [2024-09-12 01:28:08,022] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0217.TIF: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 6 minutes 31 seconds Finished: SUCCESS