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Started by upstream project "BIOFORMATS-test-repo" build number 187 originally caused by: Started by upstream project "Trigger" build number 209 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins4253569993035292561.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_29503_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:34:54,142 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:34:54,144 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:34:54,144 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:34:54,145 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:34:54,145 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:34:54,145 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:34:54,146 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:34:54,146 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:34:54,146 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:34:54,147 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:34:54,147 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:34:54,147 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:34:54,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:34:54,388 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:34:54,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:34:54,419 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:34:54,427 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:34:54,427 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:34:54,427 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:34:54,428 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:34:54,428 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:34:54,429 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:34:54,429 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 283 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-13 01:34:54,439] [main] java.version = 1.8.0_342 [testng] 01:34:54,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:34:54,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:34:54,491 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-13_01-34-54.log] [testng] 01:34:54,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-09-13 01:34:54,496] [main] testng.directory = /data [testng] [2024-09-13 01:34:54,496] [main] testng.configDirectory = /config [testng] [2024-09-13 01:34:54,508] [main] testng.multiplier = 1.0 [testng] [2024-09-13 01:34:54,509] [main] testng.in-memory = false [testng] [2024-09-13 01:34:54,509] [main] testng.allow-missing = false [testng] [2024-09-13 01:34:54,509] [main] user.language = en [testng] [2024-09-13 01:34:54,509] [main] user.country = ${user.country} [testng] [2024-09-13 01:34:54,509] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-09-13 01:34:58,868] [main] ---------------------------------------- [testng] [2024-09-13 01:34:58,868] [main] Total files: 103 [testng] [2024-09-13 01:34:58,868] [main] Scan time: 4.359 s (42 ms/file) [testng] [2024-09-13 01:34:58,868] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-13 01:35:07,647] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] 01:35:07,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:35:07,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:07,648 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-13_01-35-07.log] [testng] 01:35:07,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35e0efc2 - End of configuration. [testng] [2024-09-13 01:35:07,679] [pool-1-thread-12] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] 01:35:07,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:35:07,680 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:07,681 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-13_01-35-07.log] [testng] 01:35:07,681 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6342e1db - End of configuration. [testng] [2024-09-13 01:35:07,700] [pool-1-thread-11] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] 01:35:07,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:35:07,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:07,701 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-13_01-35-07.log] [testng] 01:35:07,701 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ce7d9fd - End of configuration. [testng] [2024-09-13 01:35:07,714] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] 01:35:07,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:35:07,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:07,715 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-13_01-35-07.log] [testng] 01:35:07,716 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d433d2a - End of configuration. [testng] [2024-09-13 01:35:07,729] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] 01:35:07,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:35:07,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:07,730 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-13_01-35-07.log] [testng] 01:35:07,740 |-INFO in ch.qos.logback.core.sift.SiftProcessor@556fd823 - End of configuration. [testng] [2024-09-13 01:35:07,767] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] 01:35:07,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:35:07,767 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:07,768 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-13_01-35-07.log] [testng] 01:35:07,768 |-INFO in ch.qos.logback.core.sift.SiftProcessor@357ee9eb - End of configuration. [testng] [2024-09-13 01:35:07,783] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] 01:35:07,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:35:07,783 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:07,784 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-13_01-35-07.log] [testng] 01:35:07,785 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56727178 - End of configuration. [testng] [2024-09-13 01:35:07,920] [pool-1-thread-6] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] 01:35:07,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:35:07,920 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:07,921 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-13_01-35-07.log] [testng] 01:35:07,921 |-INFO in ch.qos.logback.core.sift.SiftProcessor@61832287 - End of configuration. [testng] [2024-09-13 01:35:08,074] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 01:35:08,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:35:08,075 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:08,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-13_01-35-08.log] [testng] 01:35:08,076 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bb447ae - End of configuration. [testng] [2024-09-13 01:35:08,091] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] 01:35:08,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:35:08,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:08,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-13_01-35-08.log] [testng] 01:35:08,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a8bdac1 - End of configuration. [testng] [2024-09-13 01:35:08,120] [pool-1-thread-3] Initializing /data/jay/Carbon.34.dm3: [testng] 01:35:08,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:35:08,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:08,121 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-13_01-35-08.log] [testng] 01:35:08,122 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69b8045a - End of configuration. [testng] [2024-09-13 01:35:08,162] [pool-1-thread-2] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] 01:35:08,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:35:08,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:35:08,163 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-13_01-35-08.log] [testng] 01:35:08,163 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47b6ac6c - End of configuration. [testng] [2024-09-13 01:35:11,268] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-09-13 01:35:11,280] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-09-13 01:35:11,301] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-09-13 01:35:11,724] [pool-1-thread-11] Initializing /data/qa-7642/8.dm4: [testng] [2024-09-13 01:35:11,842] [pool-1-thread-10] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-09-13 01:35:12,342] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-09-13 01:35:12,689] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-09-13 01:35:13,664] [pool-1-thread-5] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-09-13 01:35:13,774] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-09-13 01:35:13,876] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-09-13 01:35:14,249] [pool-1-thread-4] Initializing /data/samples/test-tiles.dm3: [testng] [2024-09-13 01:35:14,267] [pool-1-thread-8] Initializing /data/jay/dnasample1.dm3: [testng] [2024-09-13 01:35:14,278] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-09-13 01:35:14,870] [pool-1-thread-4] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-09-13 01:35:15,055] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-09-13 01:35:15,816] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-09-13 01:35:16,283] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-09-13 01:35:16,411] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-09-13 01:35:16,541] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-09-13 01:35:17,342] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-09-13 01:35:17,505] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-09-13 01:35:19,125] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-09-13 01:35:19,542] [pool-1-thread-3] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-09-13 01:35:19,554] [pool-1-thread-8] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-09-13 01:35:19,745] [pool-1-thread-8] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-09-13 01:35:20,058] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-09-13 01:35:20,172] [pool-1-thread-6] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-09-13 01:35:20,903] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-09-13 01:35:20,912] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-09-13 01:35:20,932] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-09-13 01:35:21,768] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-09-13 01:35:22,462] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-09-13 01:35:22,485] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-09-13 01:35:22,565] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-09-13 01:35:22,652] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-09-13 01:35:23,423] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-09-13 01:35:23,655] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-09-13 01:35:25,044] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-09-13 01:35:25,288] [pool-1-thread-11] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-09-13 01:35:25,345] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-09-13 01:35:25,952] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-09-13 01:35:27,504] [pool-1-thread-4] Initializing /data/qa-21761/example.dm4: [testng] [2024-09-13 01:35:28,138] [pool-1-thread-3] Initializing /data/melissa/annotation-test.tif: [testng] [2024-09-13 01:35:28,227] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-09-13 01:35:28,904] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-09-13 01:35:28,993] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-09-13 01:35:29,075] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-09-13 01:35:29,136] [pool-1-thread-9] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-09-13 01:35:29,621] [pool-1-thread-12] Initializing /data/jay/camtest1.dm3: [testng] [2024-09-13 01:35:31,461] [pool-1-thread-9] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-09-13 01:35:31,520] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-09-13 01:35:31,604] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-09-13 01:35:33,544] [pool-1-thread-8] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-09-13 01:35:34,908] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-09-13 01:35:35,958] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-09-13 01:35:36,267] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-09-13 01:35:37,132] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-09-13 01:35:37,188] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-09-13 01:35:37,916] [pool-1-thread-1] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-09-13 01:35:38,104] [pool-1-thread-12] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-09-13 01:35:38,376] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-09-13 01:35:38,590] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-09-13 01:35:38,745] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-09-13 01:35:39,184] [pool-1-thread-10] Initializing /data/jay/DMtest2.dm3: [testng] [2024-09-13 01:35:39,324] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-09-13 01:35:39,800] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-09-13 01:35:40,195] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-09-13 01:35:40,624] [pool-1-thread-8] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-09-13 01:35:40,915] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-09-13 01:35:41,747] [pool-1-thread-2] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-09-13 01:35:42,909] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-09-13 01:35:43,045] [pool-1-thread-12] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-09-13 01:35:43,292] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-09-13 01:35:43,453] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-09-13 01:35:43,680] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-09-13 01:35:44,315] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-09-13 01:35:44,442] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-09-13 01:35:44,833] [pool-1-thread-2] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-09-13 01:35:45,674] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-09-13 01:35:47,117] [pool-1-thread-7] Initializing /data/ofra/lowloss.dm3: [testng] [2024-09-13 01:35:47,469] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-09-13 01:35:47,516] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-09-13 01:35:47,671] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-09-13 01:35:48,347] [pool-1-thread-12] Initializing /data/jay/dnasample.tif: [testng] [2024-09-13 01:35:48,491] [pool-1-thread-6] Initializing /data/jay/DMtest.dm3: [testng] [2024-09-13 01:35:49,065] [pool-1-thread-5] Initializing /data/jay/smallerfile.dm3: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 11 seconds Finished: SUCCESS