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Started by upstream project "BIOFORMATS-test-repo" build number 187 originally caused by: Started by upstream project "Trigger" build number 209 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins18442601483699824591.sh + '[' apng = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_29627_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:45:12,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:45:12,824 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:45:12,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:45:12,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:45:12,893 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:45:12,893 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:45:12,893 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:45:12,894 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:45:12,895 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:45:12,896 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:45:12,897 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 487 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-13 02:45:12,916] [main] java.version = 1.8.0_342 [testng] 02:45:12,922 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:45:12,923 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:12,973 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-13_02-45-12.log] [testng] 02:45:12,975 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-09-13 02:45:12,977] [main] testng.directory = /data [testng] [2024-09-13 02:45:12,977] [main] testng.configDirectory = /config [testng] [2024-09-13 02:45:12,990] [main] testng.multiplier = 1.0 [testng] [2024-09-13 02:45:12,991] [main] testng.in-memory = false [testng] [2024-09-13 02:45:12,991] [main] testng.allow-missing = false [testng] [2024-09-13 02:45:12,991] [main] user.language = en [testng] [2024-09-13 02:45:12,991] [main] user.country = ${user.country} [testng] [2024-09-13 02:45:12,991] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-09-13 02:45:13,750] [main] ---------------------------------------- [testng] [2024-09-13 02:45:13,751] [main] Total files: 21 [testng] [2024-09-13 02:45:13,751] [main] Scan time: 0.759 s (36 ms/file) [testng] [2024-09-13 02:45:13,752] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-13 02:45:15,487] [pool-1-thread-1] Initializing /data/samples/monkey_apng.png: [testng] 02:45:15,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:45:15,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,488 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-13_02-45-15.log] [testng] 02:45:15,489 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9aa67d0 - End of configuration. [testng] [2024-09-13 02:45:15,563] [pool-1-thread-12] Initializing /data/samples/MoonPhases.png: [testng] 02:45:15,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:45:15,563 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-13_02-45-15.log] [testng] 02:45:15,565 |-INFO in ch.qos.logback.core.sift.SiftProcessor@136beb5f - End of configuration. [testng] [2024-09-13 02:45:15,579] [pool-1-thread-11] Initializing /data/samples/daniel_coltri_one.png: [testng] 02:45:15,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:45:15,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,580 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-13_02-45-15.log] [testng] 02:45:15,581 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3312989c - End of configuration. [testng] [2024-09-13 02:45:15,602] [pool-1-thread-10] Initializing /data/qa-7473/x.png: [testng] 02:45:15,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:45:15,603 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,609 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-13_02-45-15.log] [testng] 02:45:15,610 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5703e7f0 - End of configuration. [testng] [2024-09-13 02:45:15,617] [pool-1-thread-9] Initializing /data/samples/william_wong04.png: [testng] 02:45:15,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:45:15,618 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,619 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-13_02-45-15.log] [testng] 02:45:15,620 |-INFO in ch.qos.logback.core.sift.SiftProcessor@682b50e6 - End of configuration. [testng] [2024-09-13 02:45:15,627] [pool-1-thread-8] Initializing /data/samples/Matrix.png: [testng] 02:45:15,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:45:15,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,629 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-13_02-45-15.log] [testng] 02:45:15,629 |-INFO in ch.qos.logback.core.sift.SiftProcessor@466ac680 - End of configuration. [testng] [2024-09-13 02:45:15,636] [pool-1-thread-7] Initializing /data/samples/phug_logo.png: [testng] 02:45:15,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:45:15,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,637 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-13_02-45-15.log] [testng] 02:45:15,638 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cd9588c - End of configuration. [testng] [2024-09-13 02:45:15,658] [pool-1-thread-6] Initializing /data/samples/william_wong01.png: [testng] 02:45:15,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:45:15,658 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,659 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-13_02-45-15.log] [testng] 02:45:15,660 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55a1a835 - End of configuration. [testng] [2024-09-13 02:45:15,670] [pool-1-thread-5] Initializing /data/samples/william_wong02.png: [testng] 02:45:15,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:45:15,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,671 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-13_02-45-15.log] [testng] 02:45:15,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ff9a1ac - End of configuration. [testng] [2024-09-13 02:45:15,684] [pool-1-thread-4] Initializing /data/samples/StarV838.png: [testng] 02:45:15,685 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:45:15,685 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,686 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-13_02-45-15.log] [testng] 02:45:15,687 |-INFO in ch.qos.logback.core.sift.SiftProcessor@715fd203 - End of configuration. [testng] [2024-09-13 02:45:15,700] [pool-1-thread-3] Initializing /data/samples/spinfox.png: [testng] 02:45:15,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:45:15,701 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,702 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-13_02-45-15.log] [testng] 02:45:15,702 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55979d66 - End of configuration. [testng] [2024-09-13 02:45:15,709] [pool-1-thread-2] Initializing /data/samples/orbit.png: [testng] 02:45:15,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:45:15,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:45:15,711 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-13_02-45-15.log] [testng] 02:45:15,711 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f2dcad7 - End of configuration. [testng] [2024-09-13 02:45:16,873] [pool-1-thread-10] Initializing /data/samples/PhugAnimation3.png: [testng] [2024-09-13 02:45:16,881] [pool-1-thread-7] Initializing /data/samples/joanna_viera01.png: [testng] [2024-09-13 02:45:16,886] [pool-1-thread-12] Initializing /data/colin/test.sfstdge.png: [testng] [2024-09-13 02:45:16,892] [pool-1-thread-8] Initializing /data/samples/chompy2.png: [testng] [2024-09-13 02:45:17,292] [pool-1-thread-9] Initializing /data/samples/william_wong05.png: [testng] [2024-09-13 02:45:17,299] [pool-1-thread-5] Initializing /data/samples/Sun.png: [testng] [2024-09-13 02:45:17,306] [pool-1-thread-4] Initializing /data/samples/atom.png: [testng] [2024-09-13 02:45:17,316] [pool-1-thread-6] Initializing /data/samples/daniel_coltri_two.png: [testng] [2024-09-13 02:45:17,323] [pool-1-thread-1] Initializing /data/qa-7473/n.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 11 seconds Finished: SUCCESS