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Started by upstream project "BIOFORMATS-test-repo" build number 194 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@10 [BIOFORMATS-test-folder@10] $ /bin/bash -xe /tmp/jenkins1983195363154694480.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_30777_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 14:08:26,132 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 14:08:26,133 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 14:08:26,133 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 14:08:26,134 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 14:08:26,135 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 14:08:26,135 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 14:08:26,135 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 14:08:26,135 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 14:08:26,136 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 14:08:26,136 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 14:08:26,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 14:08:26,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 14:08:26,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 14:08:26,300 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 14:08:26,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 14:08:26,325 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 14:08:26,331 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 14:08:26,331 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 14:08:26,331 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 14:08:26,332 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 14:08:26,332 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 14:08:26,333 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 14:08:26,333 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 197 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-19 14:08:26,342] [main] java.version = 21 [testng] 14:08:26,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 14:08:26,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:08:26,387 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-19_14-08-26.log] [testng] 14:08:26,388 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-09-19 14:08:26,390] [main] testng.directory = /data [testng] [2024-09-19 14:08:26,390] [main] testng.configDirectory = /config [testng] [2024-09-19 14:08:26,399] [main] testng.multiplier = 1.0 [testng] [2024-09-19 14:08:26,399] [main] testng.in-memory = false [testng] [2024-09-19 14:08:26,400] [main] testng.allow-missing = false [testng] [2024-09-19 14:08:26,400] [main] user.language = en [testng] [2024-09-19 14:08:26,400] [main] user.country = ${user.country} [testng] [2024-09-19 14:08:26,400] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-09-19 14:11:13,830] [main] ---------------------------------------- [testng] [2024-09-19 14:11:13,830] [main] Total files: 15735 [testng] [2024-09-19 14:11:13,830] [main] Scan time: 167.43 s (10 ms/file) [testng] [2024-09-19 14:11:13,831] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-19 14:13:54,974] [pool-1-thread-1] Initializing /data/converted/lior/live+cf2b.tif: [testng] 14:13:54,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 14:13:54,975 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:54,976 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-19_14-13-54.log] [testng] 14:13:54,976 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38c9edce - End of configuration. [testng] [2024-09-19 14:13:55,613] [pool-1-thread-12] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] 14:13:55,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 14:13:55,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:55,614 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-19_14-13-55.log] [testng] 14:13:55,614 |-INFO in ch.qos.logback.core.sift.SiftProcessor@32147c9b - End of configuration. [testng] [2024-09-19 14:13:56,259] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] 14:13:56,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 14:13:56,259 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:56,260 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-19_14-13-56.log] [testng] 14:13:56,260 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e883dad - End of configuration. [testng] [2024-09-19 14:13:57,497] [pool-1-thread-10] Initializing /data/converted/sebastien/test.tif: [testng] 14:13:57,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 14:13:57,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:57,498 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-19_14-13-57.log] [testng] 14:13:57,499 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ee9d2a9 - End of configuration. [testng] [2024-09-19 14:13:58,801] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] 14:13:58,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 14:13:58,801 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:58,802 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-19_14-13-58.log] [testng] 14:13:58,802 |-INFO in ch.qos.logback.core.sift.SiftProcessor@780420ad - End of configuration. [testng] [2024-09-19 14:13:59,393] [pool-1-thread-8] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 14:13:59,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 14:13:59,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:13:59,394 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-19_14-13-59.log] [testng] 14:13:59,394 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d1477a8 - End of configuration. [testng] [2024-09-19 14:14:01,237] [pool-1-thread-7] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 14:14:01,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 14:14:01,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:14:01,238 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-19_14-14-01.log] [testng] 14:14:01,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5193d478 - End of configuration. [testng] [2024-09-19 14:14:01,843] [pool-1-thread-6] Initializing /data/converted/stephan/notok1.tif: [testng] 14:14:01,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 14:14:01,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:14:01,844 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-19_14-14-01.log] [testng] 14:14:01,845 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51f47228 - End of configuration. [testng] [2024-09-19 14:14:02,398] [pool-1-thread-5] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] 14:14:02,398 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 14:14:02,398 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:14:02,399 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-19_14-14-02.log] [testng] 14:14:02,399 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60bcad75 - End of configuration. [testng] [2024-09-19 14:14:03,560] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] 14:14:03,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 14:14:03,560 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:14:03,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-19_14-14-03.log] [testng] 14:14:03,561 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c003054 - End of configuration. [testng] [2024-09-19 14:14:04,403] [pool-1-thread-3] Initializing /data/converted/sebastien/F1.tif: [testng] 14:14:04,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 14:14:04,403 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:14:04,404 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-19_14-14-04.log] [testng] 14:14:04,404 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b6882a5 - End of configuration. [testng] [2024-09-19 14:14:05,592] [pool-1-thread-2] Initializing /data/converted/stephan/notok2.tif: [testng] 14:14:05,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 14:14:05,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 14:14:05,593 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-19_14-14-05.log] [testng] 14:14:05,593 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a7403c7 - End of configuration. [testng] [2024-09-19 14:14:46,388] [pool-1-thread-9] Initializing /data/converted/converted/damian.tif: [testng] [2024-09-19 14:14:47,468] [pool-1-thread-1] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-09-19 14:15:08,101] [pool-1-thread-9] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-09-19 14:15:28,702] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-09-19 14:15:48,142] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-09-19 14:15:51,867] [pool-1-thread-2] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-09-19 14:16:06,210] [pool-1-thread-9] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-09-19 14:16:38,306] [pool-1-thread-2] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-09-19 14:16:47,554] [pool-1-thread-12] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-09-19 14:17:07,441] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-09-19 14:17:28,042] [pool-1-thread-12] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-09-19 14:17:58,154] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-09-19 14:18:08,225] [pool-1-thread-7] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-09-19 14:19:58,575] [pool-1-thread-12] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-09-19 14:22:03,104] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-09-19 14:22:30,991] [pool-1-thread-1] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-09-19 14:23:37,473] [pool-1-thread-4] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-09-19 14:23:49,725] [pool-1-thread-11] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-09-19 14:23:54,364] [pool-1-thread-10] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-09-19 14:24:26,421] [pool-1-thread-10] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-09-19 14:24:48,236] [pool-1-thread-4] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-09-19 14:25:05,299] [pool-1-thread-7] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-09-19 14:25:17,040] [pool-1-thread-4] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-09-19 14:25:29,672] [pool-1-thread-10] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-09-19 14:25:39,065] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-09-19 14:26:11,223] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-09-19 14:26:21,593] [pool-1-thread-10] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-09-19 14:27:44,645] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-09-19 14:28:57,344] [pool-1-thread-6] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-09-19 14:30:59,852] [pool-1-thread-10] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-09-19 14:31:50,766] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-09-19 14:33:54,931] [pool-1-thread-5] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-09-19 14:34:36,007] [pool-1-thread-5] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-09-19 14:34:44,144] [pool-1-thread-1] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-09-19 14:34:47,930] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-09-19 14:34:56,021] [pool-1-thread-7] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-09-19 14:35:07,968] [pool-1-thread-5] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-09-19 14:35:29,783] [pool-1-thread-11] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-09-19 14:35:33,432] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-09-19 14:35:35,703] [pool-1-thread-1] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-09-19 14:35:39,669] [pool-1-thread-9] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-09-19 14:35:41,448] [pool-1-thread-5] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-09-19 14:35:59,412] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-09-19 14:36:24,641] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-09-19 14:36:27,343] [pool-1-thread-11] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-09-19 14:36:54,116] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-09-19 14:37:11,914] [pool-1-thread-12] Initializing /data/converted/nicolas/image.tif: [testng] [2024-09-19 14:37:37,108] [pool-1-thread-12] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-09-19 14:38:01,031] [pool-1-thread-9] Initializing /data/converted/dietmar/138.tif: [testng] [2024-09-19 14:38:11,759] [pool-1-thread-12] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-09-19 14:39:30,259] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-09-19 14:40:24,371] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-09-19 14:41:07,460] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-09-19 14:41:18,224] [pool-1-thread-12] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-09-19 14:42:18,034] [pool-1-thread-8] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-09-19 14:42:28,379] [pool-1-thread-8] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-09-19 14:43:18,750] [pool-1-thread-2] Initializing /data/converted/michel/d.tif: [testng] [2024-09-19 14:43:57,735] [pool-1-thread-2] Initializing /data/othmar/mozaic.tif: [testng] [2024-09-19 14:44:28,845] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-09-19 14:45:59,695] [pool-1-thread-9] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-09-19 14:46:29,827] [pool-1-thread-8] Initializing /data/scott/Slide133-04.tif: [testng] [2024-09-19 14:46:53,820] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-09-19 14:46:59,784] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-09-19 14:47:35,587] [pool-1-thread-1] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-09-19 14:48:06,184] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-09-19 14:48:17,051] [pool-1-thread-1] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-09-19 14:48:31,649] [pool-1-thread-3] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-09-19 14:48:48,988] [pool-1-thread-1] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-09-19 14:49:00,871] [pool-1-thread-3] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-09-19 14:49:14,505] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-09-19 14:49:42,385] [pool-1-thread-3] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-09-19 14:51:15,362] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-09-19 14:52:00,067] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-09-19 14:53:31,480] [pool-1-thread-11] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-09-19 14:54:11,613] [pool-1-thread-11] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-09-19 14:54:39,725] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-09-19 14:56:15,312] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-09-19 14:56:27,860] [pool-1-thread-8] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-09-19 14:56:36,709] [pool-1-thread-2] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-09-19 14:56:49,959] [pool-1-thread-9] Initializing /data/scott/Slide133-11.tif: [testng] [2024-09-19 14:57:23,951] [pool-1-thread-9] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-09-19 14:58:43,643] [pool-1-thread-12] Initializing /data/converted/dietmar/137.tif: [testng] [2024-09-19 14:59:11,880] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-09-19 15:01:57,690] [pool-1-thread-6] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-09-19 15:03:16,484] [pool-1-thread-6] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-09-19 15:03:46,237] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-09-19 15:05:23,787] [pool-1-thread-7] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-09-19 15:05:25,923] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-09-19 15:05:55,625] [pool-1-thread-7] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-09-19 15:06:03,024] [pool-1-thread-5] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-09-19 15:06:26,656] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-09-19 15:07:44,400] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-09-19 15:07:53,111] [pool-1-thread-6] Initializing /data/scott/Slide133-01.tif: [testng] [2024-09-19 15:08:17,690] [pool-1-thread-5] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-09-19 15:08:24,067] [pool-1-thread-10] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-09-19 15:08:28,084] [pool-1-thread-6] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-09-19 15:08:55,602] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-09-19 15:09:01,698] [pool-1-thread-5] Initializing /data/converted/converted/2chz.tif: [testng] [2024-09-19 15:09:59,398] [pool-1-thread-6] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-09-19 15:10:33,672] [pool-1-thread-6] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-09-19 15:11:04,488] [pool-1-thread-6] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-09-19 15:11:20,011] [pool-1-thread-7] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-09-19 15:12:29,702] [pool-1-thread-5] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-09-19 15:12:31,744] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-09-19 15:13:18,807] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-09-19 15:13:53,770] [pool-1-thread-9] Initializing /data/converted/michel/b.tif: [testng] [2024-09-19 15:14:33,125] [pool-1-thread-9] Initializing /data/converted/michel/c.tif: [testng] [2024-09-19 15:15:11,813] [pool-1-thread-9] Initializing /data/scott/Slide133-08.tif: [testng] [2024-09-19 15:15:44,714] [pool-1-thread-9] Initializing /data/converted/michel/e.tif: [testng] [2024-09-19 15:16:11,461] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-09-19 15:16:55,767] [pool-1-thread-9] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-09-19 15:16:59,587] [pool-1-thread-2] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-09-19 15:17:12,023] [pool-1-thread-12] Initializing /data/converted/michel/a.tif: [testng] 15:56:09,795 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 15:56:09,795 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:56:09,798 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-19_15-56-09.log] [testng] 15:56:09,798 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9f28bff - End of configuration. [testng] 15:59:08,101 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 15:59:08,101 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 15:59:08,102 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-19_15-59-08.log] [testng] 15:59:08,102 |-INFO in ch.qos.logback.core.sift.SiftProcessor@631990cc - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 110 minutes 45 seconds Finished: SUCCESS