![[Jenkins]](/jenkins/static/9ed1fe1f/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 195 originally caused by: Started by upstream project "Trigger" build number 217 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins17510234822954600313.sh + '[' afi = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_30893_merge_ci -v /test/idr/repos/curated/afi:/data -v /test/idr-scratch/merge-ci/curated/afi:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 17:31:24,591 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 17:31:24,640 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 17:31:24,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 17:31:24,692 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 17:31:24,706 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 17:31:24,706 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 17:31:24,706 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 17:31:24,707 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 17:31:24,707 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 17:31:24,708 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 17:31:24,709 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 453 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-20 17:31:24,726] [main] java.version = 1.8.0_342 [testng] 17:31:24,731 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 17:31:24,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:24,803 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-20_17-31-24.log] [testng] 17:31:24,806 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-09-20 17:31:24,808] [main] testng.directory = /data [testng] [2024-09-20 17:31:24,809] [main] testng.configDirectory = /config [testng] [2024-09-20 17:31:24,826] [main] testng.multiplier = 1.0 [testng] [2024-09-20 17:31:24,826] [main] testng.in-memory = false [testng] [2024-09-20 17:31:24,826] [main] testng.allow-missing = false [testng] [2024-09-20 17:31:24,826] [main] user.language = en [testng] [2024-09-20 17:31:24,826] [main] user.country = ${user.country} [testng] [2024-09-20 17:31:24,826] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-09-20 17:31:25,744] [main] ---------------------------------------- [testng] [2024-09-20 17:31:25,744] [main] Total files: 16 [testng] [2024-09-20 17:31:25,744] [main] Scan time: 0.917 s (57 ms/file) [testng] [2024-09-20 17:31:25,744] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 15 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-20 17:31:37,434] [pool-1-thread-1] Initializing /data/samples/5365.afi: [testng] 17:31:37,435 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 17:31:37,435 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:37,437 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-20_17-31-37.log] [testng] 17:31:37,438 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a406d7d - End of configuration. [testng] [2024-09-20 17:31:37,561] [pool-1-thread-12] Initializing /data/samples/5440.afi: [testng] 17:31:37,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 17:31:37,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:37,562 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-20_17-31-37.log] [testng] 17:31:37,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a657a7f - End of configuration. [testng] [2024-09-20 17:31:37,695] [pool-1-thread-11] Initializing /data/samples/5383.afi: [testng] 17:31:37,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 17:31:37,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:37,696 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-20_17-31-37.log] [testng] 17:31:37,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22e507a - End of configuration. [testng] [2024-09-20 17:31:37,754] [pool-1-thread-10] Initializing /data/samples/5347.afi: [testng] 17:31:37,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 17:31:37,754 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:37,755 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-20_17-31-37.log] [testng] 17:31:37,755 |-INFO in ch.qos.logback.core.sift.SiftProcessor@735de0e2 - End of configuration. [testng] [2024-09-20 17:31:37,856] [pool-1-thread-9] Initializing /data/samples/5351.afi: [testng] 17:31:37,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 17:31:37,857 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:37,857 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-20_17-31-37.log] [testng] 17:31:37,858 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7546cd20 - End of configuration. [testng] [2024-09-20 17:31:37,968] [pool-1-thread-8] Initializing /data/samples/5358.afi: [testng] 17:31:37,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 17:31:37,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:37,969 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-20_17-31-37.log] [testng] 17:31:37,970 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f893340 - End of configuration. [testng] [2024-09-20 17:31:38,146] [pool-1-thread-7] Initializing /data/samples/5400.afi: [testng] 17:31:38,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 17:31:38,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:38,148 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-20_17-31-38.log] [testng] 17:31:38,148 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fd5da06 - End of configuration. [testng] [2024-09-20 17:31:38,213] [pool-1-thread-6] Initializing /data/samples/5414.afi: [testng] 17:31:38,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 17:31:38,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:38,214 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-20_17-31-38.log] [testng] 17:31:38,214 |-INFO in ch.qos.logback.core.sift.SiftProcessor@353f7d86 - End of configuration. [testng] [2024-09-20 17:31:38,302] [pool-1-thread-5] Initializing /data/samples/5387.afi: [testng] 17:31:38,302 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 17:31:38,302 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:38,303 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-20_17-31-38.log] [testng] 17:31:38,314 |-INFO in ch.qos.logback.core.sift.SiftProcessor@654b34d4 - End of configuration. [testng] [2024-09-20 17:31:38,403] [pool-1-thread-4] Initializing /data/samples/5306.afi: [testng] 17:31:38,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 17:31:38,404 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:38,404 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-20_17-31-38.log] [testng] 17:31:38,405 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a9ba50d - End of configuration. [testng] [2024-09-20 17:31:38,470] [pool-1-thread-3] Initializing /data/samples/5343.afi: [testng] 17:31:38,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 17:31:38,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:38,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-20_17-31-38.log] [testng] 17:31:38,472 |-INFO in ch.qos.logback.core.sift.SiftProcessor@272e5e23 - End of configuration. [testng] [2024-09-20 17:31:38,669] [pool-1-thread-2] Initializing /data/samples/5339.afi: [testng] 17:31:38,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 17:31:38,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 17:31:38,671 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-20_17-31-38.log] [testng] 17:31:38,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ada7c71 - End of configuration. [testng] [2024-09-20 17:32:27,675] [pool-1-thread-7] Initializing /data/samples/5407.afi: [testng] [2024-09-20 17:32:28,432] [pool-1-thread-12] Initializing /data/samples/5371.afi: [testng] [2024-09-20 17:32:29,320] [pool-1-thread-6] Initializing /data/samples/5446.afi: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 795, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 48 seconds Finished: SUCCESS