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Started by upstream project "BIOFORMATS-test-repo" build number 196
originally caused by:
 Started by upstream project "Trigger" build number 220
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3
[BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins8968080705323047370.sh
+ '[' pcx = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_30977_merge_ci -v /test/idr/repos/curated/pcx:/data -v /test/idr-scratch/merge-ci/curated/pcx:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 01:21:06,299 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 01:21:06,300 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 01:21:06,300 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:06,301 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 01:21:06,302 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 01:21:06,302 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 01:21:06,302 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 01:21:06,302 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:06,303 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 01:21:06,303 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 01:21:06,304 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 01:21:06,304 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 01:21:06,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 01:21:06,476 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 01:21:06,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 01:21:06,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 01:21:06,507 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 01:21:06,507 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 01:21:06,507 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 01:21:06,507 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 01:21:06,508 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 01:21:06,508 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 01:21:06,508 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 205 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-09-22 01:21:06,518] [main] java.version = 17.0.2
   [testng] 01:21:06,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 01:21:06,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:06,565 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-22_01-21-06.log]
   [testng] 01:21:06,567 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-09-22 01:21:06,569] [main] testng.directory = /data
   [testng] [2024-09-22 01:21:06,569] [main] testng.configDirectory = /config
   [testng] [2024-09-22 01:21:06,578] [main] testng.multiplier = 1.0
   [testng] [2024-09-22 01:21:06,578] [main] testng.in-memory = false
   [testng] [2024-09-22 01:21:06,578] [main] testng.allow-missing = false
   [testng] [2024-09-22 01:21:06,578] [main] user.language = en
   [testng] [2024-09-22 01:21:06,578] [main] user.country = ${user.country}
   [testng] [2024-09-22 01:21:06,579] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-09-22 01:21:07,011] [main] ----------------------------------------
   [testng] [2024-09-22 01:21:07,011] [main] Total files: 36
   [testng] [2024-09-22 01:21:07,011] [main] Scan time: 0.432 s (12 ms/file)
   [testng] [2024-09-22 01:21:07,011] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 35 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-09-22 01:21:08,817] [pool-1-thread-1] Initializing /data/generated/mri-stack17.pcx: 
   [testng] 01:21:08,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 01:21:08,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,820 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-22_01-21-08.log]
   [testng] 01:21:08,820 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30c12d3 - End of configuration.
   [testng] [2024-09-22 01:21:08,874] [pool-1-thread-12] Initializing /data/josh/Screenshots/slidebooksamezposition.pcx: 
   [testng] 01:21:08,874 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 01:21:08,874 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,875 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-22_01-21-08.log]
   [testng] 01:21:08,876 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d4323e0 - End of configuration.
   [testng] [2024-09-22 01:21:08,884] [pool-1-thread-11] Initializing /data/generated/mri-stack16.pcx: 
   [testng] 01:21:08,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 01:21:08,885 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,886 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-22_01-21-08.log]
   [testng] 01:21:08,886 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a9d771a - End of configuration.
   [testng] [2024-09-22 01:21:08,892] [pool-1-thread-10] Initializing /data/generated/mri-stack0.pcx: 
   [testng] 01:21:08,892 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 01:21:08,892 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,893 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-22_01-21-08.log]
   [testng] 01:21:08,893 |-INFO in ch.qos.logback.core.sift.SiftProcessor@196433ac - End of configuration.
   [testng] [2024-09-22 01:21:08,899] [pool-1-thread-9] Initializing /data/generated/mri-stack12.pcx: 
   [testng] 01:21:08,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 01:21:08,899 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,900 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-22_01-21-08.log]
   [testng] 01:21:08,900 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7dc69d2c - End of configuration.
   [testng] [2024-09-22 01:21:08,906] [pool-1-thread-8] Initializing /data/generated/mri-stack26.pcx: 
   [testng] 01:21:08,907 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 01:21:08,907 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,907 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-22_01-21-08.log]
   [testng] 01:21:08,908 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c975e5e - End of configuration.
   [testng] [2024-09-22 01:21:08,915] [pool-1-thread-7] Initializing /data/generated/mri-stack21.pcx: 
   [testng] 01:21:08,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 01:21:08,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,916 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-22_01-21-08.log]
   [testng] 01:21:08,916 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37370e56 - End of configuration.
   [testng] [2024-09-22 01:21:08,925] [pool-1-thread-6] Initializing /data/josh/Screenshots/leica-lif.pcx: 
   [testng] 01:21:08,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 01:21:08,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,927 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-22_01-21-08.log]
   [testng] 01:21:08,927 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11bee2d3 - End of configuration.
   [testng] [2024-09-22 01:21:08,943] [pool-1-thread-5] Initializing /data/generated/mri-stack25.pcx: 
   [testng] 01:21:08,943 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 01:21:08,943 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,944 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-22_01-21-08.log]
   [testng] 01:21:08,944 |-INFO in ch.qos.logback.core.sift.SiftProcessor@573e7e7b - End of configuration.
   [testng] [2024-09-22 01:21:08,950] [pool-1-thread-4] Initializing /data/generated/mri-stack3.pcx: 
   [testng] 01:21:08,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 01:21:08,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,951 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-22_01-21-08.log]
   [testng] 01:21:08,952 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d957e1e - End of configuration.
   [testng] [2024-09-22 01:21:08,958] [pool-1-thread-3] Initializing /data/generated/mri-stack5.pcx: 
   [testng] 01:21:08,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 01:21:08,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,960 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-22_01-21-08.log]
   [testng] 01:21:08,960 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43d6a3b1 - End of configuration.
   [testng] [2024-09-22 01:21:08,965] [pool-1-thread-2] Initializing /data/generated/mri-stack15.pcx: 
   [testng] 01:21:08,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 01:21:08,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 01:21:08,966 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-22_01-21-08.log]
   [testng] 01:21:08,967 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26d80166 - End of configuration.
   [testng] [2024-09-22 01:21:11,201] [pool-1-thread-8] Initializing /data/generated/mri-stack8.pcx: 
   [testng] [2024-09-22 01:21:11,205] [pool-1-thread-4] Initializing /data/josh/Screenshots/Metamorph image-stack.pcx: 
   [testng] [2024-09-22 01:21:11,212] [pool-1-thread-10] Initializing /data/generated/mri-stack6.pcx: 
   [testng] [2024-09-22 01:21:11,216] [pool-1-thread-1] Initializing /data/generated/mri-stack22.pcx: 
   [testng] [2024-09-22 01:21:11,219] [pool-1-thread-5] Initializing /data/generated/mri-stack2.pcx: 
   [testng] [2024-09-22 01:21:11,223] [pool-1-thread-2] Initializing /data/generated/mri-stack19.pcx: 
   [testng] [2024-09-22 01:21:11,227] [pool-1-thread-7] Initializing /data/josh/Screenshots/biorad color off.pcx: 
   [testng] [2024-09-22 01:21:11,232] [pool-1-thread-3] Initializing /data/generated/mri-stack10.pcx: 
   [testng] [2024-09-22 01:21:11,237] [pool-1-thread-9] Initializing /data/generated/mri-stack9.pcx: 
   [testng] [2024-09-22 01:21:11,241] [pool-1-thread-11] Initializing /data/generated/mri-stack11.pcx: 
   [testng] [2024-09-22 01:21:11,245] [pool-1-thread-6] Initializing /data/generated/mri-stack18.pcx: 
   [testng] [2024-09-22 01:21:11,247] [pool-1-thread-12] Initializing /data/josh/Screenshots/nd2 color.pcx: 
   [testng] [2024-09-22 01:21:11,531] [pool-1-thread-8] Initializing /data/josh/Screenshots/epscolor.pcx: 
   [testng] [2024-09-22 01:21:11,539] [pool-1-thread-3] Initializing /data/josh/Screenshots/fv1000color.pcx: 
   [testng] [2024-09-22 01:21:11,547] [pool-1-thread-5] Initializing /data/generated/mri-stack1.pcx: 
   [testng] [2024-09-22 01:21:11,614] [pool-1-thread-10] Initializing /data/generated/mri-stack23.pcx: 
   [testng] [2024-09-22 01:21:11,617] [pool-1-thread-2] Initializing /data/generated/mri-stack13.pcx: 
   [testng] [2024-09-22 01:21:11,620] [pool-1-thread-1] Initializing /data/generated/mri-stack20.pcx: 
   [testng] [2024-09-22 01:21:11,622] [pool-1-thread-11] Initializing /data/generated/mri-stack24.pcx: 
   [testng] [2024-09-22 01:21:11,625] [pool-1-thread-6] Initializing /data/josh/Screenshots/deltavision.pcx: 
   [testng] [2024-09-22 01:21:11,631] [pool-1-thread-9] Initializing /data/generated/mri-stack4.pcx: 
   [testng] [2024-09-22 01:21:11,718] [pool-1-thread-5] Initializing /data/generated/mri-stack14.pcx: 
   [testng] [2024-09-22 01:21:11,779] [pool-1-thread-10] Initializing /data/generated/mri-stack7.pcx: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 1855, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 10 seconds
Finished: SUCCESS