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Started by upstream project "BIOFORMATS-test-repo" build number 25 originally caused by: Started by upstream project "Trigger" build number 28 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins5982615816020556454.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_3100_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:20:54,236 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:54,238 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:20:54,238 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:54,239 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:54,239 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:54,240 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:54,240 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:54,240 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:54,241 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:54,241 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:54,242 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:54,242 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:54,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:54,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:54,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:54,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:54,471 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:54,471 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:54,471 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:54,472 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:54,472 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:20:54,473 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:20:54,473 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 232 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-06 01:20:54,483] [main] java.version = 11.0.16 [testng] 01:20:54,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:54,487 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:54,533 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-06_01-20-54.log] [testng] 01:20:54,535 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-04-06 01:20:54,537] [main] testng.directory = /data [testng] [2024-04-06 01:20:54,537] [main] testng.configDirectory = /config [testng] [2024-04-06 01:20:54,548] [main] testng.multiplier = 1.0 [testng] [2024-04-06 01:20:54,549] [main] testng.in-memory = false [testng] [2024-04-06 01:20:54,549] [main] testng.allow-missing = false [testng] [2024-04-06 01:20:54,549] [main] user.language = en [testng] [2024-04-06 01:20:54,550] [main] user.country = ${user.country} [testng] [2024-04-06 01:20:54,550] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-04-06 01:21:09,774] [main] ---------------------------------------- [testng] [2024-04-06 01:21:09,775] [main] Total files: 4424 [testng] [2024-04-06 01:21:09,775] [main] Scan time: 15.224 s (3 ms/file) [testng] [2024-04-06 01:21:09,775] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 721 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-06 01:23:20,325] [pool-1-thread-1] Initializing /data/bene/3d-example-stack.tif: [testng] 01:23:20,326 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:20,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,329 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-06_01-23-20.log] [testng] 01:23:20,329 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3644486d - End of configuration. [testng] [2024-04-06 01:23:20,428] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] 01:23:20,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:20,428 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,429 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-06_01-23-20.log] [testng] 01:23:20,430 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d2316cd - End of configuration. [testng] [2024-04-06 01:23:20,466] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x64.tiff: [testng] 01:23:20,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:20,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,467 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-06_01-23-20.log] [testng] 01:23:20,468 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49c3dccb - End of configuration. [testng] [2024-04-06 01:23:20,497] [pool-1-thread-10] Initializing /data/josiah/cell-Z10.C1.tiff: [testng] 01:23:20,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:20,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,498 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-06_01-23-20.log] [testng] 01:23:20,498 |-INFO in ch.qos.logback.core.sift.SiftProcessor@488be3a7 - End of configuration. [testng] [2024-04-06 01:23:20,533] [pool-1-thread-9] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] 01:23:20,533 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:20,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,534 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-06_01-23-20.log] [testng] 01:23:20,535 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2106ca5f - End of configuration. [testng] [2024-04-06 01:23:20,568] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0210.TIF: [testng] 01:23:20,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:20,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,569 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-06_01-23-20.log] [testng] 01:23:20,570 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a8d60c2 - End of configuration. [testng] [2024-04-06 01:23:20,640] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z003.tif: [testng] 01:23:20,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:20,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,641 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-06_01-23-20.log] [testng] 01:23:20,642 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fbc1ecc - End of configuration. [testng] [2024-04-06 01:23:20,681] [pool-1-thread-6] Initializing /data/christine/Image5D_4color test stack/RGB from I5D.tif: [testng] 01:23:20,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:20,681 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,681 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-06_01-23-20.log] [testng] 01:23:20,682 |-INFO in ch.qos.logback.core.sift.SiftProcessor@103a2b4d - End of configuration. [testng] [2024-04-06 01:23:20,746] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs006.TIF: [testng] 01:23:20,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:20,746 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,746 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-06_01-23-20.log] [testng] 01:23:20,747 |-INFO in ch.qos.logback.core.sift.SiftProcessor@664763a0 - End of configuration. [testng] [2024-04-06 01:23:20,816] [pool-1-thread-4] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] 01:23:20,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:20,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-06_01-23-20.log] [testng] 01:23:20,817 |-INFO in ch.qos.logback.core.sift.SiftProcessor@293377ae - End of configuration. [testng] [2024-04-06 01:23:20,851] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z004.tif: [testng] 01:23:20,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:20,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,852 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-06_01-23-20.log] [testng] 01:23:20,852 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1c2c5f9b - End of configuration. [testng] [2024-04-06 01:23:20,888] [pool-1-thread-2] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] 01:23:20,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:20,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:20,889 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-06_01-23-20.log] [testng] 01:23:20,889 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f604423 - End of configuration. [testng] [2024-04-06 01:23:25,218] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z025.tif: [testng] [2024-04-06 01:23:25,450] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z002.tif: [testng] [2024-04-06 01:23:25,758] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z048.tif: [testng] [2024-04-06 01:23:25,783] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z034.tif: [testng] [2024-04-06 01:23:25,803] [pool-1-thread-7] Initializing /data/samples/melissa/imagej-4gb/4gb-imagej.tif: [testng] [2024-04-06 01:23:25,857] [pool-1-thread-10] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-04-06 01:23:26,057] [pool-1-thread-9] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-04-06 01:23:26,094] [pool-1-thread-4] Initializing /data/ascb/FND-13_PorterFranziniTransverse_4800.tif: [testng] [2024-04-06 01:23:28,714] [pool-1-thread-6] Initializing /data/alexa/test4.tif: [testng] [2024-04-06 01:23:28,832] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z011.tif: [testng] [2024-04-06 01:23:28,861] [pool-1-thread-5] Initializing /data/ascb/CYT-31_FriendOsmium_4800.tif: [testng] [2024-04-06 01:23:29,195] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z021.tif: [testng] [2024-04-06 01:23:29,255] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-32x32.tiff: [testng] [2024-04-06 01:23:29,427] [pool-1-thread-1] Initializing /data/jonathan/XSEC-02.TIF: [testng] [2024-04-06 01:23:29,478] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z047.tif: [testng] [2024-04-06 01:23:29,593] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z054.tif: [testng] [2024-04-06 01:23:29,615] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z026.tif: [testng] [2024-04-06 01:23:29,802] [pool-1-thread-8] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-04-06 01:23:29,990] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-04-06 01:23:30,179] [pool-1-thread-11] Initializing /data/damian/21m.tiff: [testng] [2024-04-06 01:23:30,278] [pool-1-thread-3] Initializing /data/public/condensation/C4.pattern3.tif: [testng] [2024-04-06 01:23:30,454] [pool-1-thread-6] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-04-06 01:23:30,496] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z038.tif: [testng] [2024-04-06 01:23:30,517] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z026.tif: [testng] [2024-04-06 01:23:30,946] [pool-1-thread-9] Initializing /data/jonathan/Cut-1_001.tif: [testng] [2024-04-06 01:23:31,016] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-04-06 01:23:31,061] [pool-1-thread-8] Initializing /data/public/condensation/E4.pattern5.tif: [testng] [2024-04-06 01:23:31,610] [pool-1-thread-11] Initializing /data/ascb/CYT-56_HowellGolgiRibbonRaw_4800.tif: [testng] [2024-04-06 01:23:31,744] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z027.tif: [testng] [2024-04-06 01:23:31,784] [pool-1-thread-10] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-04-06 01:23:31,837] [pool-1-thread-6] Initializing /data/josiah/cell-Z33.C1.tiff: [testng] [2024-04-06 01:23:31,881] [pool-1-thread-3] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-04-06 01:23:32,158] [pool-1-thread-12] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-04-06 01:23:32,209] [pool-1-thread-7] Initializing /data/brian/MFGTMP_080902150001t001B02f73d1.TIF: [testng] [2024-04-06 01:23:32,489] [pool-1-thread-8] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-04-06 01:23:32,830] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0258.TIF: [testng] [2024-04-06 01:23:33,039] [pool-1-thread-6] Initializing 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01:25:36,330] [pool-1-thread-10] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-04-06 01:25:37,148] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [2024-04-06 01:25:37,578] [pool-1-thread-4] Initializing /data/curtis/map/the-quick: [testng] [2024-04-06 01:25:38,110] [pool-1-thread-4] Initializing /data/pavel/Dmel/spim.pattern: [testng] [2024-04-06 01:25:39,725] [pool-1-thread-7] Initializing /data/imagesc-82872/SG11410002_253174651388_S001.tif: [testng] [2024-04-06 01:25:39,863] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-04-06 01:25:40,021] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z021.tif: [testng] [2024-04-06 01:25:40,168] [pool-1-thread-1] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] [2024-04-06 01:25:40,304] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z035.tif: [testng] [2024-04-06 01:25:40,475] [pool-1-thread-5] Initializing 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Initializing /data/lzw/test.tif: [testng] [2024-04-06 01:25:41,708] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-04-06 01:25:41,741] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] [2024-04-06 01:25:41,971] [pool-1-thread-11] Initializing /data/josh/ZProjection of stack.tif: [testng] [2024-04-06 01:25:42,112] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-04-06 01:25:42,181] [pool-1-thread-6] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] [2024-04-06 01:25:45,034] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z025.tif: [testng] [2024-04-06 01:25:45,093] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0228.TIF: [testng] [2024-04-06 01:25:45,360] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-04-06 01:25:45,449] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z031.tif: [testng] [2024-04-06 01:25:45,734] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z023.tif: [testng] [2024-04-06 01:25:45,764] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z013.tif: [testng] [2024-04-06 01:25:45,895] [pool-1-thread-11] Initializing /data/jeff/erdas_spnad83.tif: [testng] [2024-04-06 01:25:45,945] [pool-1-thread-3] Initializing /data/josiah/cell-Z7.C0.tiff: [testng] [2024-04-06 01:25:46,220] [pool-1-thread-9] Initializing /data/josh/NESb_C2_TP1.tiff: [testng] [2024-04-06 01:25:46,327] [pool-1-thread-10] Initializing /data/josiah/cell-Z18.C0.tiff: [testng] [2024-04-06 01:25:46,421] [pool-1-thread-1] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-04-06 01:25:46,574] [pool-1-thread-11] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-04-06 01:25:46,630] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-04-06 01:25:46,686] [pool-1-thread-3] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-04-06 01:25:46,932] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] [2024-04-06 01:25:47,109] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-04-06 01:25:47,158] [pool-1-thread-1] Initializing /data/ascb/CYT-152_Raben_Eating.tif: [testng] [2024-04-06 01:25:47,229] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-04-06 01:25:47,289] [pool-1-thread-9] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-04-06 01:25:47,630] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z036.tif: [testng] [2024-04-06 01:25:47,744] [pool-1-thread-10] Initializing /data/public/condensation/A5.pattern2.tif: [testng] [2024-04-06 01:25:47,844] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z036.tif: [testng] [2024-04-06 01:25:48,060] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z018.tif: [testng] [2024-04-06 01:25:48,332] [pool-1-thread-3] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-04-06 01:25:48,429] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z017.tif: [testng] [2024-04-06 01:25:48,492] [pool-1-thread-11] Initializing /data/misc/ms-paint.png: [testng] [2024-04-06 01:25:48,730] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z009.tif: [testng] [2024-04-06 01:25:48,772] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C1_Z015.tif: [testng] [2024-04-06 01:25:48,844] [pool-1-thread-10] Initializing /data/marc/ball48_LOCI_2_RGB_autoscale_10x.tif: [testng] [2024-04-06 01:25:49,135] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z000.tif: [testng] [2024-04-06 01:25:49,314] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] [2024-04-06 01:25:49,568] [pool-1-thread-3] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-04-06 01:25:49,627] [pool-1-thread-11] Initializing /data/damian/18m.tiff: [testng] [2024-04-06 01:25:49,780] [pool-1-thread-5] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-04-06 01:25:50,063] [pool-1-thread-10] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-04-06 01:25:50,111] [pool-1-thread-11] Initializing /data/big-images/2kx2k.tif: [testng] [2024-04-06 01:25:50,545] [pool-1-thread-10] Initializing /data/josh/NESb_C2_TP6.tiff: [testng] [2024-04-06 01:25:50,662] [pool-1-thread-5] Initializing /data/jeff/test36b.tif: [testng] [2024-04-06 01:25:50,928] [pool-1-thread-5] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-04-06 01:25:51,495] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x16.tiff: [testng] [2024-04-06 01:25:51,866] [pool-1-thread-10] Initializing /data/stephane/P014.tif: [testng] [2024-04-06 01:25:51,984] [pool-1-thread-5] Initializing /data/chris/GFP + Vav2 actin 3b.tif: [testng] [2024-04-06 01:25:52,750] [pool-1-thread-10] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-04-06 01:25:52,896] [pool-1-thread-4] Initializing /data/curtis/test1.tiff: [testng] [2024-04-06 01:25:52,936] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-04-06 01:25:52,987] [pool-1-thread-11] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-04-06 01:25:53,516] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z005.tif: [testng] [2024-04-06 01:25:53,689] [pool-1-thread-5] Initializing /data/edward/TestDoc2.tif: [testng] [2024-04-06 01:25:53,845] [pool-1-thread-10] Initializing /data/public/condensation/C4.pattern8.tif: [testng] [2024-04-06 01:25:54,260] [pool-1-thread-4] Initializing /data/josiah/cell-Z38.C0.tiff: [testng] [2024-04-06 01:25:54,499] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-04-06 01:25:54,616] [pool-1-thread-11] Initializing /data/martin/head.tif: [testng] [2024-04-06 01:25:54,774] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-04-06 01:25:54,844] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z011.tif: [testng] [2024-04-06 01:25:54,883] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-04-06 01:25:55,083] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C1_Z023.tif: [testng] [2024-04-06 01:25:55,279] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0233.TIF: [testng] [2024-04-06 01:25:55,327] [pool-1-thread-4] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-04-06 01:25:55,368] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0214.TIF: [testng] [2024-04-06 01:25:55,515] [pool-1-thread-12] Initializing /data/boguslaw/Arabidopsis_large.tif: [testng] [2024-04-06 01:25:57,168] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-04-06 01:25:57,264] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-60.tiff: [testng] [2024-04-06 01:25:57,432] [pool-1-thread-4] Initializing /data/ascb/FND-26_PaladeGlycogen_4800.tif: [testng] [2024-04-06 01:25:57,677] [pool-1-thread-8] Initializing /data/andrew/wibble-tmp4.tiff: [testng] [2024-04-06 01:25:57,707] [pool-1-thread-9] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-04-06 01:25:57,959] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-04-06 01:25:57,992] [pool-1-thread-11] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-04-06 01:25:58,122] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] [2024-04-06 01:25:58,540] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-04-06 01:25:58,583] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z047.tif: [testng] [2024-04-06 01:25:58,871] [pool-1-thread-10] Initializing /data/ascb/FND-25_PaladeGroup_4800.tif: [testng] [2024-04-06 01:25:58,999] [pool-1-thread-11] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] [2024-04-06 01:25:59,120] [pool-1-thread-5] Initializing /data/josiah/cell-Z26.C1.tiff: [testng] [2024-04-06 01:25:59,469] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z003.tif: [testng] [2024-04-06 01:25:59,550] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z049.tif: [testng] [2024-04-06 01:25:59,822] [pool-1-thread-5] Initializing /data/samples/cielab/Ski_TC8-03_ROMM_lab.tif: [testng] [2024-04-06 01:25:59,950] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-04-06 01:26:00,047] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z010.tif: [testng] [2024-04-06 01:26:00,221] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0250.TIF: [testng] [2024-04-06 01:26:00,441] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z029.tif: [testng] [2024-04-06 01:26:00,608] [pool-1-thread-9] Initializing /data/curtis/clown.tif: [testng] [2024-04-06 01:26:00,870] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x16.tiff: [testng] [2024-04-06 01:26:00,960] [pool-1-thread-9] Initializing /data/brian/retina/retina_C1_Z038.tif: [testng] [2024-04-06 01:26:01,190] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-04-06 01:26:01,249] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-04-06 01:26:01,296] [pool-1-thread-9] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-04-06 01:26:01,726] [pool-1-thread-12] Initializing /data/misc/mri-stack.tif: [testng] [2024-04-06 01:26:01,772] [pool-1-thread-8] Initializing /data/brian/retina/retina_C0_Z060.tif: [testng] [2024-04-06 01:26:02,134] [pool-1-thread-8] Initializing /data/john/C100915-MA_AXIS_LEH_IMAGE_KIND_FLAT_ICE_3.tif: [testng] [2024-04-06 01:26:02,266] [pool-1-thread-9] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-04-06 01:26:02,321] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z042.tif: [testng] [2024-04-06 01:26:02,897] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-04-06 01:26:03,060] [pool-1-thread-9] Initializing /data/ascb/CYT-149_Fader_Fusion.tif: [testng] [2024-04-06 01:26:03,251] [pool-1-thread-12] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-04-06 01:26:03,679] [pool-1-thread-8] Initializing /data/harvey/NR_Giemsa_Sag_CTb_Retina_02.tif: [testng] [2024-04-06 01:26:03,848] [pool-1-thread-12] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-04-06 01:26:05,148] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z002.tif: [testng] [2024-04-06 01:26:05,343] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0207.TIF: [testng] [2024-04-06 01:26:05,632] [pool-1-thread-12] Initializing /data/josiah/cell-Z12.C0.tiff: [testng] [2024-04-06 01:26:05,749] [pool-1-thread-10] Initializing /data/curtis/images24.tiff: [testng] [2024-04-06 01:26:06,144] [pool-1-thread-12] Initializing /data/wayne/clown-rgb.tif: [testng] [2024-04-06 01:26:06,177] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs000.TIF: [testng] [2024-04-06 01:26:06,314] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z062.tif: [testng] [2024-04-06 01:26:06,338] [pool-1-thread-8] Initializing /data/public/libtiff/ycbcr-cat.tif: [testng] [2024-04-06 01:26:06,381] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-04-06 01:26:06,739] [pool-1-thread-10] Initializing /data/jay/Cleared%2fStack.tif: [testng] [2024-04-06 01:26:06,858] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-04-06 01:26:06,970] [pool-1-thread-11] Initializing /data/matt/CR20070824-002_6202483715-06 003_0_P23_0Red.tif: [testng] [2024-04-06 01:26:07,102] [pool-1-thread-8] Initializing /data/public/condensation/E4.pattern8.tif: [testng] [2024-04-06 01:26:07,986] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38213, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 5 minutes 56 seconds Finished: SUCCESS