![[Jenkins]](/jenkins/static/9ed1fe1f/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 199 originally caused by: Started by upstream project "Trigger" build number 223 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins14360740671096266618.sh + '[' lim = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_31483_merge_ci -v /test/idr/repos/curated/lim:/data -v /test/idr-scratch/merge-ci/curated/lim:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:24,548 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:24,549 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:21:24,549 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:24,550 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:24,551 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:24,551 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:24,551 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:24,551 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:24,552 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:24,552 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:24,553 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:24,553 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:24,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:24,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:24,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:24,756 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:24,762 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:24,762 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:24,762 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:24,763 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:24,763 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:21:24,763 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:21:24,764 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 212 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-25 01:21:24,773] [main] java.version = 17.0.2 [testng] 01:21:24,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:24,777 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:24,821 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-25_01-21-24.log] [testng] 01:21:24,823 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-09-25 01:21:24,825] [main] testng.directory = /data [testng] [2024-09-25 01:21:24,825] [main] testng.configDirectory = /config [testng] [2024-09-25 01:21:24,834] [main] testng.multiplier = 1.0 [testng] [2024-09-25 01:21:24,835] [main] testng.in-memory = false [testng] [2024-09-25 01:21:24,835] [main] testng.allow-missing = false [testng] [2024-09-25 01:21:24,835] [main] user.language = en [testng] [2024-09-25 01:21:24,835] [main] user.country = ${user.country} [testng] [2024-09-25 01:21:24,835] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-09-25 01:21:25,208] [main] ---------------------------------------- [testng] [2024-09-25 01:21:25,208] [main] Total files: 21 [testng] [2024-09-25 01:21:25,208] [main] Scan time: 0.373 s (17 ms/file) [testng] [2024-09-25 01:21:25,209] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 20 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-25 01:21:26,372] [pool-1-thread-1] Initializing /data/venu/Kontrolle0009.lim: [testng] 01:21:26,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:26,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,373 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-25_01-21-26.log] [testng] 01:21:26,374 |-INFO in ch.qos.logback.core.sift.SiftProcessor@16b99f82 - End of configuration. [testng] [2024-09-25 01:21:26,435] [pool-1-thread-12] Initializing /data/venu/Kontrolle0005.lim: [testng] 01:21:26,437 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:26,438 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-25_01-21-26.log] [testng] 01:21:26,439 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4b742723 - End of configuration. [testng] [2024-09-25 01:21:26,456] [pool-1-thread-11] Initializing /data/venu/Kontrolle0008.lim: [testng] 01:21:26,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:26,456 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,457 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-25_01-21-26.log] [testng] 01:21:26,457 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6431fcbd - End of configuration. [testng] [2024-09-25 01:21:26,473] [pool-1-thread-10] Initializing /data/venu/Kontrolle0014.lim: [testng] 01:21:26,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:26,473 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,474 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-25_01-21-26.log] [testng] 01:21:26,474 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c135fb8 - End of configuration. [testng] [2024-09-25 01:21:26,492] [pool-1-thread-9] Initializing /data/venu/Kontrolle0010.lim: [testng] 01:21:26,492 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:26,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,494 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-25_01-21-26.log] [testng] 01:21:26,494 |-INFO in ch.qos.logback.core.sift.SiftProcessor@386870bb - End of configuration. [testng] [2024-09-25 01:21:26,512] [pool-1-thread-8] Initializing /data/venu/Kontrolle0002.lim: [testng] 01:21:26,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:26,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,513 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-25_01-21-26.log] [testng] 01:21:26,513 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f87f628 - End of configuration. [testng] [2024-09-25 01:21:26,540] [pool-1-thread-7] Initializing /data/venu/Kontrolle0012.lim: [testng] 01:21:26,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:26,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,541 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-25_01-21-26.log] [testng] 01:21:26,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dbc9680 - End of configuration. [testng] [2024-09-25 01:21:26,555] [pool-1-thread-6] Initializing /data/venu/Kontrolle0018.lim: [testng] 01:21:26,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:26,555 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,556 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-25_01-21-26.log] [testng] 01:21:26,556 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a511d88 - End of configuration. [testng] [2024-09-25 01:21:26,568] [pool-1-thread-5] Initializing /data/venu/Kontrolle0019.lim: [testng] 01:21:26,568 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:26,569 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,569 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-25_01-21-26.log] [testng] 01:21:26,570 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39dbc034 - End of configuration. [testng] [2024-09-25 01:21:26,590] [pool-1-thread-4] Initializing /data/venu/Kontrolle0011.lim: [testng] 01:21:26,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:26,590 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,591 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-25_01-21-26.log] [testng] 01:21:26,592 |-INFO in ch.qos.logback.core.sift.SiftProcessor@370c073 - End of configuration. [testng] [2024-09-25 01:21:26,609] [pool-1-thread-3] Initializing /data/venu/Kontrolle0016.lim: [testng] 01:21:26,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:26,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,611 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-25_01-21-26.log] [testng] 01:21:26,612 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31eb3162 - End of configuration. [testng] [2024-09-25 01:21:26,629] [pool-1-thread-2] Initializing /data/venu/Kontrolle0003.lim: [testng] 01:21:26,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:26,630 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:26,630 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-25_01-21-26.log] [testng] 01:21:26,631 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1045bef1 - End of configuration. [testng] [2024-09-25 01:21:29,198] [pool-1-thread-6] Initializing /data/venu/Kontrolle0007.lim: [testng] [2024-09-25 01:21:29,213] [pool-1-thread-2] Initializing /data/venu/Kontrolle0017.lim: [testng] [2024-09-25 01:21:29,228] [pool-1-thread-7] Initializing /data/venu/Kontrolle0001.lim: [testng] [2024-09-25 01:21:29,245] [pool-1-thread-12] Initializing /data/venu/Kontrolle0015.lim: [testng] [2024-09-25 01:21:29,263] [pool-1-thread-11] Initializing /data/venu/Kontrolle0013.lim: [testng] [2024-09-25 01:21:29,277] [pool-1-thread-9] Initializing /data/venu/Kontrolle0021.lim: [testng] [2024-09-25 01:21:29,291] [pool-1-thread-10] Initializing /data/venu/Kontrolle0004.lim: [testng] [2024-09-25 01:21:29,314] [pool-1-thread-3] Initializing /data/venu/Kontrolle0020.lim: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1060, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 9 seconds Finished: SUCCESS