Started by upstream project "BIOFORMATS-test-repo" build number 200 originally caused by: Started by upstream project "Trigger" build number 225 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins12979702597852278286.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_31674_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 06:44:57,278 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 06:44:57,279 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 06:44:57,279 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:44:57,280 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 06:44:57,280 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 06:44:57,281 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 06:44:57,281 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 06:44:57,281 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:44:57,281 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 06:44:57,282 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 06:44:57,282 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 06:44:57,283 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 06:44:57,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 06:44:57,458 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 06:44:57,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 06:44:57,490 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 06:44:57,498 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 06:44:57,498 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 06:44:57,498 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 06:44:57,498 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 06:44:57,498 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 06:44:57,499 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 06:44:57,499 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 218 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-26 06:44:57,509] [main] java.version = 21 [testng] 06:44:57,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:44:57,512 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:44:57,554 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-26_06-44-57.log] [testng] 06:44:57,555 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-09-26 06:44:57,557] [main] testng.directory = /data [testng] [2024-09-26 06:44:57,557] [main] testng.configDirectory = /config [testng] [2024-09-26 06:44:57,566] [main] testng.multiplier = 1.0 [testng] [2024-09-26 06:44:57,566] [main] testng.in-memory = false [testng] [2024-09-26 06:44:57,566] [main] testng.allow-missing = false [testng] [2024-09-26 06:44:57,566] [main] user.language = en [testng] [2024-09-26 06:44:57,566] [main] user.country = ${user.country} [testng] [2024-09-26 06:44:57,566] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-09-26 06:45:13,368] [main] ---------------------------------------- [testng] [2024-09-26 06:45:13,368] [main] Total files: 259 [testng] [2024-09-26 06:45:13,368] [main] Scan time: 15.801 s (61 ms/file) [testng] [2024-09-26 06:45:13,369] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-26 06:51:12,546] [pool-1-thread-1] Initializing /data/johannes/step2.bmp: [testng] 06:51:12,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 06:51:12,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:12,548 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-26_06-51-12.log] [testng] 06:51:12,549 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52b86168 - End of configuration. [testng] [2024-09-26 06:51:12,993] [pool-1-thread-12] Initializing /data/brian/FLIP.oib: [testng] 06:51:12,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 06:51:12,994 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:12,994 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-26_06-51-12.log] [testng] 06:51:12,995 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f66862d - End of configuration. [testng] [2024-09-26 06:51:15,032] [pool-1-thread-11] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] 06:51:15,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 06:51:15,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:15,033 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-26_06-51-15.log] [testng] 06:51:15,033 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ee20634 - End of configuration. [testng] [2024-09-26 06:51:15,509] [pool-1-thread-10] Initializing /data/yoshihito/XY.oif: [testng] 06:51:15,509 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 06:51:15,510 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:15,510 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-26_06-51-15.log] [testng] 06:51:15,511 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30a776f0 - End of configuration. [testng] [2024-09-26 06:51:15,751] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oif: [testng] 06:51:15,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 06:51:15,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:15,752 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-26_06-51-15.log] [testng] 06:51:15,752 |-INFO in ch.qos.logback.core.sift.SiftProcessor@401acfa7 - End of configuration. [testng] [2024-09-26 06:51:16,281] [pool-1-thread-8] Initializing /data/johannes/Image0006/Image0006.oif: [testng] 06:51:16,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 06:51:16,281 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:16,282 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-26_06-51-16.log] [testng] 06:51:16,282 |-INFO in ch.qos.logback.core.sift.SiftProcessor@145564dc - End of configuration. [testng] [2024-09-26 06:51:17,068] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] 06:51:17,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 06:51:17,068 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:17,069 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-26_06-51-17.log] [testng] 06:51:17,069 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cc9158d - End of configuration. [testng] [2024-09-26 06:51:17,899] [pool-1-thread-6] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] 06:51:17,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 06:51:17,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:17,900 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-26_06-51-17.log] [testng] 06:51:17,901 |-INFO in ch.qos.logback.core.sift.SiftProcessor@771c5da1 - End of configuration. [testng] [2024-09-26 06:51:20,967] [pool-1-thread-5] Initializing /data/brian/PA-GFPv-2.oib: [testng] 06:51:20,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 06:51:20,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:20,968 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-26_06-51-20.log] [testng] 06:51:20,968 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72f5b3af - End of configuration. [testng] [2024-09-26 06:51:21,452] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib: [testng] 06:51:21,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 06:51:21,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:21,453 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-26_06-51-21.log] [testng] 06:51:21,454 |-INFO in ch.qos.logback.core.sift.SiftProcessor@452991c3 - End of configuration. [testng] [2024-09-26 06:51:21,751] [pool-1-thread-3] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 06:51:21,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 06:51:21,752 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:21,753 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-26_06-51-21.log] [testng] 06:51:21,753 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7be77972 - End of configuration. [testng] [2024-09-26 06:51:22,245] [pool-1-thread-2] Initializing /data/brian/PA-GFP-3.oib: [testng] 06:51:22,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 06:51:22,245 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:51:22,245 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-26_06-51-22.log] [testng] 06:51:22,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b977412 - End of configuration. [testng] [2024-09-26 06:51:25,628] [pool-1-thread-1] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-09-26 06:51:26,187] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-09-26 06:51:26,691] [pool-1-thread-4] Initializing /data/glen/singlesimul.oib: [testng] [2024-09-26 06:51:27,470] [pool-1-thread-11] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-09-26 06:51:28,247] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-09-26 06:51:28,838] [pool-1-thread-2] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-09-26 06:51:29,154] [pool-1-thread-3] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-09-26 06:51:30,348] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-09-26 06:51:30,566] [pool-1-thread-12] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-09-26 06:51:33,214] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif: [testng] [2024-09-26 06:51:33,696] [pool-1-thread-1] Initializing /data/yasunori/series_1.oib: [testng] [2024-09-26 06:51:34,132] [pool-1-thread-7] Initializing /data/glen/Null file/test change.oif: [testng] [2024-09-26 06:51:34,917] [pool-1-thread-2] Initializing /data/glen/singleseqline.oib: [testng] [2024-09-26 06:51:35,565] [pool-1-thread-5] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-09-26 06:51:37,117] [pool-1-thread-6] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-09-26 06:51:39,720] [pool-1-thread-11] Initializing /data/david/Image0016.oif: [testng] [2024-09-26 06:51:40,847] [pool-1-thread-1] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-09-26 06:51:42,070] [pool-1-thread-10] Initializing /data/glen/seqlinestack.oif: [testng] [2024-09-26 06:51:57,713] [pool-1-thread-2] Initializing /data/glen/notsaturated.oib: [testng] [2024-09-26 06:51:58,250] [pool-1-thread-3] Initializing /data/michael/CELL3.oib: [testng] [2024-09-26 06:51:59,439] [pool-1-thread-5] Initializing /data/tom/RGB-1.avi: [testng] [2024-09-26 06:52:00,718] [pool-1-thread-3] Initializing /data/glen/singleseqframe.oib: [testng] [2024-09-26 06:52:00,999] [pool-1-thread-9] Initializing /data/glen/4205basal106072.oif: [testng] [2024-09-26 06:52:04,479] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-09-26 06:52:05,133] [pool-1-thread-2] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-09-26 06:52:07,763] [pool-1-thread-1] Initializing /data/simon/used_to_work.oib: [testng] [2024-09-26 06:52:08,376] [pool-1-thread-7] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-09-26 06:52:08,735] [pool-1-thread-3] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-09-26 06:52:10,410] [pool-1-thread-4] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-09-26 06:52:11,313] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-09-26 06:52:12,047] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-09-26 06:52:12,632] [pool-1-thread-1] Initializing /data/monica/Image0056.oif: [testng] [2024-09-26 06:52:13,494] [pool-1-thread-5] Initializing /data/glen/singlesimul.oif: [testng] [2024-09-26 06:52:14,285] [pool-1-thread-6] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-09-26 06:52:15,412] [pool-1-thread-4] Initializing /data/glen/Image0002.oif: [testng] [2024-09-26 06:52:19,521] [pool-1-thread-7] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-09-26 06:52:57,919] [pool-1-thread-6] Initializing /data/johannes/step4b.bmp: [testng] [2024-09-26 06:52:59,609] [pool-1-thread-6] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-09-26 06:53:00,976] [pool-1-thread-11] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-09-26 06:53:02,387] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-09-26 06:53:03,606] [pool-1-thread-6] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-09-26 06:53:04,309] [pool-1-thread-11] Initializing /data/simon/never_worked.oib: [testng] [2024-09-26 06:53:06,306] [pool-1-thread-3] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-09-26 06:53:07,050] [pool-1-thread-6] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-09-26 06:53:07,987] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-09-26 06:53:11,669] [pool-1-thread-11] Initializing /data/molly/11OCT4.OIF: [testng] [2024-09-26 06:53:19,532] [pool-1-thread-3] Initializing /data/glen/simulstack.oib: [testng] [2024-09-26 06:53:20,619] [pool-1-thread-1] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-09-26 06:53:20,984] [pool-1-thread-5] Initializing /data/molly/11OCT6.OIF: [testng] [2024-09-26 06:53:32,289] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-09-26 06:53:33,303] [pool-1-thread-1] Initializing /data/johannes/step5b.bmp: [testng] [2024-09-26 06:53:34,988] [pool-1-thread-1] Initializing /data/pedro/plv-test.oib: [testng] [2024-09-26 06:53:36,630] [pool-1-thread-3] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-09-26 06:53:38,404] [pool-1-thread-1] Initializing /data/david/Image0016.oib: [testng] [2024-09-26 06:53:40,258] [pool-1-thread-3] Initializing /data/tom/zseries-test.oib: [testng] [2024-09-26 06:53:42,273] [pool-1-thread-1] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-09-26 06:53:43,403] [pool-1-thread-1] Initializing /data/karl/Image0009.oib: [testng] [2024-09-26 06:53:46,293] [pool-1-thread-1] Initializing /data/molly/11OCT3.OIF: [testng] [2024-09-26 06:54:20,256] [pool-1-thread-3] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-09-26 06:54:23,097] [pool-1-thread-3] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-09-26 06:55:53,624] [pool-1-thread-6] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-09-26 07:01:10,659] [pool-1-thread-6] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-09-26 07:01:16,189] [pool-1-thread-6] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-09-26 07:01:21,646] [pool-1-thread-6] Initializing /data/molly/11OCT5.OIF: [testng] [2024-09-26 07:01:47,544] [pool-1-thread-12] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-09-26 07:01:52,485] [pool-1-thread-12] Initializing /data/aryeh/control_test.oib: [testng] [2024-09-26 07:02:12,376] [pool-1-thread-12] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-09-26 07:05:20,428] [pool-1-thread-2] Initializing /data/yoshihito/XY.oib: [testng] [2024-09-26 07:05:23,643] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-09-26 07:05:29,449] [pool-1-thread-2] Initializing /data/kay/IM2pg.oib: [testng] [2024-09-26 07:05:34,979] [pool-1-thread-2] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-09-26 07:05:39,099] [pool-1-thread-2] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-09-26 07:05:45,784] [pool-1-thread-2] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-09-26 07:05:48,990] [pool-1-thread-2] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-09-26 07:05:53,552] [pool-1-thread-2] Initializing /data/brian/lambda02nm.oib: [testng] [2024-09-26 07:05:58,149] [pool-1-thread-2] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-09-26 07:06:03,205] [pool-1-thread-2] Initializing /data/molly/11OCT10.OIF: [testng] [2024-09-26 07:07:55,955] [pool-1-thread-4] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-09-26 07:08:00,013] [pool-1-thread-4] Initializing /data/sten/01.oib: [testng] [2024-09-26 07:08:05,199] [pool-1-thread-4] Initializing /data/aryeh/1h.oib: [testng] [2024-09-26 07:08:13,483] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-09-26 07:08:19,443] [pool-1-thread-4] Initializing /data/christian/20min.oif: [testng] [2024-09-26 07:08:40,697] [pool-1-thread-4] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-09-26 07:08:46,745] [pool-1-thread-4] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-09-26 07:08:52,318] [pool-1-thread-4] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-09-26 07:08:57,325] [pool-1-thread-4] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-09-26 07:09:03,590] [pool-1-thread-4] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-09-26 07:09:39,503] [pool-1-thread-4] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-09-26 07:09:46,918] [pool-1-thread-4] Initializing /data/molly/11OCT11.OIF: [testng] [2024-09-26 07:10:00,838] [pool-1-thread-3] Initializing /data/molly/11OCT2.OIF: [testng] [2024-09-26 07:11:16,338] [pool-1-thread-12] Initializing /data/molly/11OCT9.OIF: [testng] [2024-09-26 07:12:02,605] [pool-1-thread-11] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-09-26 07:12:41,379] [pool-1-thread-11] Initializing /data/glen/111407.oif: [testng] [2024-09-26 07:13:29,819] [pool-1-thread-9] Initializing /data/marc/V0606J.oib: [testng] [2024-09-26 07:13:42,266] [pool-1-thread-10] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-09-26 07:13:46,181] [pool-1-thread-9] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-09-26 07:13:47,434] [pool-1-thread-10] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-09-26 07:14:24,495] [pool-1-thread-9] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-09-26 07:14:30,781] [pool-1-thread-5] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-09-26 07:18:02,162] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-09-26 07:18:08,167] [pool-1-thread-9] Initializing /data/johannes/step1.bmp: [testng] [2024-09-26 07:18:11,188] [pool-1-thread-9] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-09-26 07:18:16,945] [pool-1-thread-9] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-09-26 07:18:56,348] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-09-26 07:19:03,557] [pool-1-thread-10] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-09-26 07:19:04,424] [pool-1-thread-9] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-09-26 07:19:11,501] [pool-1-thread-10] Initializing /data/molly/11OCT8.OIF: [testng] [2024-09-26 07:19:35,256] [pool-1-thread-9] Initializing /data/glen/notsaturated.oif: [testng] [2024-09-26 07:20:55,922] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-09-26 07:21:03,327] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-09-26 07:21:10,382] [pool-1-thread-6] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-09-26 07:21:52,330] [pool-1-thread-8] Initializing /data/johannes/step4.bmp: [testng] [2024-09-26 07:21:54,801] [pool-1-thread-8] Initializing /data/brian/Kaede15.oib: [testng] [2024-09-26 07:22:00,984] [pool-1-thread-8] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-09-26 07:28:13,755] [pool-1-thread-9] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-09-26 07:28:19,107] [pool-1-thread-9] Initializing /data/marc/V0606L.oib: [testng] [2024-09-26 07:28:36,206] [pool-1-thread-9] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-09-26 07:28:58,494] [pool-1-thread-11] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-09-26 07:29:03,339] [pool-1-thread-11] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-09-26 07:29:08,540] [pool-1-thread-11] Initializing /data/johannes/step3.bmp: [testng] [2024-09-26 07:29:11,721] [pool-1-thread-11] Initializing /data/glen/seqlinestack.oib: [testng] [2024-09-26 07:29:18,214] [pool-1-thread-11] Initializing /data/glen/simulstack.oif: [testng] [2024-09-26 07:30:25,807] [pool-1-thread-8] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-09-26 07:30:30,439] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-09-26 07:30:35,845] [pool-1-thread-8] Initializing /data/molly/11OCT7.OIF: [testng] [2024-09-26 07:33:24,382] [pool-1-thread-2] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-09-26 07:33:29,085] [pool-1-thread-4] Initializing /data/allan/62909#1.oib: [testng] [2024-09-26 07:33:29,860] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-09-26 07:33:33,834] [pool-1-thread-4] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-09-26 07:33:43,576] [pool-1-thread-2] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-09-26 07:34:05,894] [pool-1-thread-4] Initializing /data/chris/missegragation-15.oib: [testng] [2024-09-26 07:34:11,044] [pool-1-thread-4] Initializing /data/jae/Image0001.oib: [testng] 08:19:43,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 08:19:43,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:19:43,175 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-26_08-19-43.log] [testng] 08:19:43,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30219d4a - End of configuration. [testng] 08:22:20,088 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 08:22:20,089 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:22:20,089 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-26_08-22-20.log] [testng] 08:22:20,090 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ffd4fd5 - End of configuration. [testng] 08:32:15,163 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 08:32:15,164 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:32:15,165 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-26_08-32-15.log] [testng] 08:32:15,165 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c7eb2a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 107 minutes 23 seconds Finished: SUCCESS