![[Jenkins]](/jenkins/static/695419c3/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 200 originally caused by: Started by upstream project "Trigger" build number 225 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins6693421816693232722.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_31761_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 09:17:50,461 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 09:17:50,463 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 09:17:50,463 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 09:17:50,464 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 09:17:50,464 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 09:17:50,464 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 09:17:50,465 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 09:17:50,465 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 09:17:50,465 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 09:17:50,466 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 09:17:50,466 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 09:17:50,466 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 09:17:50,622 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 09:17:50,622 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 09:17:50,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 09:17:50,646 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 09:17:50,652 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 09:17:50,652 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 09:17:50,653 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 09:17:50,653 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 09:17:50,653 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 09:17:50,654 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 09:17:50,654 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 189 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-26 09:17:50,663] [main] java.version = 21 [testng] 09:17:50,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 09:17:50,666 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:17:50,707 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-26_09-17-50.log] [testng] 09:17:50,708 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-09-26 09:17:50,710] [main] testng.directory = /data [testng] [2024-09-26 09:17:50,710] [main] testng.configDirectory = /config [testng] [2024-09-26 09:17:50,718] [main] testng.multiplier = 1.0 [testng] [2024-09-26 09:17:50,719] [main] testng.in-memory = false [testng] [2024-09-26 09:17:50,719] [main] testng.allow-missing = false [testng] [2024-09-26 09:17:50,719] [main] user.language = en [testng] [2024-09-26 09:17:50,719] [main] user.country = ${user.country} [testng] [2024-09-26 09:17:50,719] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-09-26 09:19:19,391] [main] ---------------------------------------- [testng] [2024-09-26 09:19:19,391] [main] Total files: 15735 [testng] [2024-09-26 09:19:19,392] [main] Scan time: 88.672 s (5 ms/file) [testng] [2024-09-26 09:19:19,392] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-26 09:20:24,314] [pool-1-thread-1] Initializing /data/converted/lior/live+cf2b.tif: [testng] 09:20:24,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 09:20:24,314 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:24,315 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-26_09-20-24.log] [testng] 09:20:24,316 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7cdb6432 - End of configuration. [testng] [2024-09-26 09:20:24,496] [pool-1-thread-12] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] 09:20:24,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 09:20:24,497 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:24,498 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-26_09-20-24.log] [testng] 09:20:24,498 |-INFO in ch.qos.logback.core.sift.SiftProcessor@259294a0 - End of configuration. [testng] [2024-09-26 09:20:24,804] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] 09:20:24,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 09:20:24,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:24,805 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-26_09-20-24.log] [testng] 09:20:24,805 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f7ac6fa - End of configuration. [testng] [2024-09-26 09:20:25,336] [pool-1-thread-10] Initializing /data/converted/sebastien/test.tif: [testng] 09:20:25,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 09:20:25,337 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:25,338 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-26_09-20-25.log] [testng] 09:20:25,338 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2070a583 - End of configuration. [testng] [2024-09-26 09:20:25,695] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] 09:20:25,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 09:20:25,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:25,696 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-26_09-20-25.log] [testng] 09:20:25,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37c5d91d - End of configuration. [testng] [2024-09-26 09:20:25,908] [pool-1-thread-8] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] 09:20:25,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 09:20:25,908 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:25,909 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-26_09-20-25.log] [testng] 09:20:25,909 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6eb24782 - End of configuration. [testng] [2024-09-26 09:20:27,609] [pool-1-thread-7] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 09:20:27,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 09:20:27,610 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:27,611 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-26_09-20-27.log] [testng] 09:20:27,611 |-INFO in ch.qos.logback.core.sift.SiftProcessor@182fde2 - End of configuration. [testng] [2024-09-26 09:20:27,942] [pool-1-thread-6] Initializing /data/converted/stephan/notok1.tif: [testng] 09:20:27,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 09:20:27,942 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:27,943 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-26_09-20-27.log] [testng] 09:20:27,943 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f094931 - End of configuration. [testng] [2024-09-26 09:20:28,181] [pool-1-thread-5] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] 09:20:28,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 09:20:28,182 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:28,182 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-26_09-20-28.log] [testng] 09:20:28,183 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9859b7d - End of configuration. [testng] [2024-09-26 09:20:29,417] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] 09:20:29,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 09:20:29,417 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:29,418 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-26_09-20-29.log] [testng] 09:20:29,418 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ad065c2 - End of configuration. [testng] [2024-09-26 09:20:29,978] [pool-1-thread-3] Initializing /data/converted/sebastien/F1.tif: [testng] 09:20:29,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 09:20:29,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:29,979 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-26_09-20-29.log] [testng] 09:20:29,979 |-INFO in ch.qos.logback.core.sift.SiftProcessor@343f447c - End of configuration. [testng] [2024-09-26 09:20:30,282] [pool-1-thread-2] Initializing /data/converted/stephan/notok2.tif: [testng] 09:20:30,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 09:20:30,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:20:30,282 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-26_09-20-30.log] [testng] 09:20:30,283 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63879347 - End of configuration. [testng] [2024-09-26 09:20:49,469] [pool-1-thread-1] Initializing /data/converted/converted/damian.tif: [testng] [2024-09-26 09:20:53,778] [pool-1-thread-9] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-09-26 09:20:58,505] [pool-1-thread-1] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-09-26 09:21:08,182] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-09-26 09:21:15,652] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-09-26 09:21:16,808] [pool-1-thread-6] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-09-26 09:21:19,192] [pool-1-thread-1] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-09-26 09:21:30,335] [pool-1-thread-6] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-09-26 09:21:35,291] [pool-1-thread-12] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-09-26 09:21:40,709] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-09-26 09:21:50,879] [pool-1-thread-12] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-09-26 09:21:58,933] [pool-1-thread-7] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-09-26 09:22:00,294] [pool-1-thread-3] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-09-26 09:23:00,695] [pool-1-thread-12] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-09-26 09:24:19,738] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-09-26 09:24:41,843] [pool-1-thread-9] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-09-26 09:25:26,408] [pool-1-thread-4] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-09-26 09:25:36,551] [pool-1-thread-10] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-09-26 09:25:39,589] [pool-1-thread-11] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-09-26 09:26:05,917] [pool-1-thread-11] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-09-26 09:26:24,606] [pool-1-thread-4] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-09-26 09:26:31,911] [pool-1-thread-3] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-09-26 09:26:48,209] [pool-1-thread-4] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-09-26 09:26:59,271] [pool-1-thread-3] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-09-26 09:27:00,840] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-09-26 09:27:26,679] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-09-26 09:27:40,001] [pool-1-thread-3] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-09-26 09:28:33,044] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-09-26 09:29:22,052] [pool-1-thread-2] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-09-26 09:30:43,247] [pool-1-thread-3] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-09-26 09:31:08,198] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-09-26 09:33:25,462] [pool-1-thread-5] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-09-26 09:33:34,584] [pool-1-thread-6] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-09-26 09:33:40,113] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-09-26 09:33:45,030] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-09-26 09:33:53,976] [pool-1-thread-5] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-09-26 09:33:59,134] [pool-1-thread-6] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-09-26 09:34:14,756] [pool-1-thread-10] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-09-26 09:34:18,303] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-09-26 09:34:23,025] [pool-1-thread-9] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-09-26 09:34:26,856] [pool-1-thread-5] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-09-26 09:34:28,123] [pool-1-thread-6] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-09-26 09:34:36,074] [pool-1-thread-10] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-09-26 09:34:54,280] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-09-26 09:35:00,426] [pool-1-thread-9] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-09-26 09:35:18,278] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-09-26 09:35:26,813] [pool-1-thread-12] Initializing /data/converted/nicolas/image.tif: [testng] [2024-09-26 09:35:51,965] [pool-1-thread-12] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-09-26 09:36:24,720] [pool-1-thread-5] Initializing /data/converted/dietmar/138.tif: [testng] [2024-09-26 09:36:34,916] [pool-1-thread-12] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-09-26 09:37:58,328] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-09-26 09:38:44,356] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-09-26 09:39:22,328] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-09-26 09:39:33,410] [pool-1-thread-12] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-09-26 09:41:11,621] [pool-1-thread-8] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-09-26 09:41:19,748] [pool-1-thread-8] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-09-26 09:41:27,985] [pool-1-thread-11] Initializing /data/converted/michel/d.tif: [testng] [2024-09-26 09:41:54,305] [pool-1-thread-11] Initializing /data/othmar/mozaic.tif: [testng] [2024-09-26 09:42:13,612] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-09-26 09:43:23,165] [pool-1-thread-5] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-09-26 09:44:03,772] [pool-1-thread-1] Initializing /data/scott/Slide133-04.tif: [testng] [2024-09-26 09:44:20,181] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-09-26 09:44:26,328] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-09-26 09:44:30,931] [pool-1-thread-10] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-09-26 09:44:55,914] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-09-26 09:45:00,706] [pool-1-thread-11] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-09-26 09:45:06,162] [pool-1-thread-7] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-09-26 09:45:32,323] [pool-1-thread-11] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-09-26 09:45:40,240] [pool-1-thread-7] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-09-26 09:45:55,726] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-09-26 09:46:21,847] [pool-1-thread-7] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-09-26 09:47:27,400] [pool-1-thread-2] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-09-26 09:47:55,411] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-09-26 09:49:35,626] [pool-1-thread-9] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-09-26 09:50:14,053] [pool-1-thread-9] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-09-26 09:50:26,060] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-09-26 09:52:14,712] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-09-26 09:52:18,714] [pool-1-thread-8] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-09-26 09:52:25,391] [pool-1-thread-5] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-09-26 09:52:31,713] [pool-1-thread-1] Initializing /data/scott/Slide133-11.tif: [testng] [2024-09-26 09:52:57,309] [pool-1-thread-1] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-09-26 09:53:56,665] [pool-1-thread-12] Initializing /data/converted/dietmar/137.tif: [testng] [2024-09-26 09:54:10,997] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-09-26 09:56:18,259] [pool-1-thread-2] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-09-26 09:57:21,383] [pool-1-thread-2] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-09-26 09:57:49,857] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-09-26 09:59:18,892] [pool-1-thread-10] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-09-26 09:59:25,789] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-09-26 09:59:39,217] [pool-1-thread-10] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-09-26 09:59:40,924] [pool-1-thread-6] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-09-26 09:59:58,411] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-09-26 10:00:37,788] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-09-26 10:00:45,406] [pool-1-thread-12] Initializing /data/scott/Slide133-01.tif: [testng] [2024-09-26 10:01:08,169] [pool-1-thread-3] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-09-26 10:01:09,517] [pool-1-thread-12] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-09-26 10:01:16,605] [pool-1-thread-6] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-09-26 10:01:32,605] [pool-1-thread-12] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-09-26 10:01:40,428] [pool-1-thread-3] Initializing /data/converted/converted/2chz.tif: [testng] [2024-09-26 10:02:21,343] [pool-1-thread-6] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-09-26 10:02:45,982] [pool-1-thread-6] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-09-26 10:03:09,576] [pool-1-thread-6] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-09-26 10:03:25,732] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-09-26 10:04:06,958] [pool-1-thread-7] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-09-26 10:04:11,161] [pool-1-thread-3] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-09-26 10:04:43,270] [pool-1-thread-7] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-09-26 10:05:32,324] [pool-1-thread-1] Initializing /data/converted/michel/b.tif: [testng] [2024-09-26 10:05:58,153] [pool-1-thread-1] Initializing /data/converted/michel/c.tif: [testng] [2024-09-26 10:06:41,786] [pool-1-thread-1] Initializing /data/scott/Slide133-08.tif: [testng] [2024-09-26 10:07:17,041] [pool-1-thread-1] Initializing /data/converted/michel/e.tif: [testng] [2024-09-26 10:07:43,854] [pool-1-thread-5] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-09-26 10:08:09,678] [pool-1-thread-2] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-09-26 10:08:20,974] [pool-1-thread-12] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-09-26 10:08:29,303] [pool-1-thread-1] Initializing /data/converted/michel/a.tif: [testng] 10:41:07,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 10:41:07,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:41:07,412 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-26_10-41-07.log] [testng] 10:41:07,412 |-INFO in ch.qos.logback.core.sift.SiftProcessor@67436cc4 - End of configuration. [testng] 10:43:32,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 10:43:32,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:43:32,192 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-26_10-43-32.log] [testng] 10:43:32,192 |-INFO in ch.qos.logback.core.sift.SiftProcessor@631990cc - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 85 minutes 47 seconds Finished: SUCCESS