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Started by upstream project "BIOFORMATS-test-repo" build number 25 originally caused by: Started by upstream project "Trigger" build number 28 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins14969148306291616167.sh + '[' apng = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_3215_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 02:21:32,132 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:21:32,134 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 02:21:32,134 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:21:32,136 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:21:32,137 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:21:32,138 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:21:32,139 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 3 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:21:32,139 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:21:32,140 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:21:32,142 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:21:32,143 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:21:32,143 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:21:32,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:21:32,453 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:21:32,500 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:21:32,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:21:32,512 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:21:32,513 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:21:32,513 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:21:32,514 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:21:32,514 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 02:21:32,515 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 02:21:32,515 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 375 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-06 02:21:32,529] [main] java.version = 11.0.16 [testng] 02:21:32,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:21:32,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:32,599 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-06_02-21-32.log] [testng] 02:21:32,602 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-04-06 02:21:32,606] [main] testng.directory = /data [testng] [2024-04-06 02:21:32,606] [main] testng.configDirectory = /config [testng] [2024-04-06 02:21:32,622] [main] testng.multiplier = 1.0 [testng] [2024-04-06 02:21:32,624] [main] testng.in-memory = false [testng] [2024-04-06 02:21:32,624] [main] testng.allow-missing = false [testng] [2024-04-06 02:21:32,624] [main] user.language = en [testng] [2024-04-06 02:21:32,624] [main] user.country = ${user.country} [testng] [2024-04-06 02:21:32,624] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-04-06 02:21:33,190] [main] ---------------------------------------- [testng] [2024-04-06 02:21:33,190] [main] Total files: 21 [testng] [2024-04-06 02:21:33,190] [main] Scan time: 0.566 s (26 ms/file) [testng] [2024-04-06 02:21:33,191] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-06 02:21:34,688] [pool-1-thread-1] Initializing /data/samples/MoonPhases.png: [testng] 02:21:34,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:21:34,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,694 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-06_02-21-34.log] [testng] 02:21:34,696 |-INFO in ch.qos.logback.core.sift.SiftProcessor@705fc2f6 - End of configuration. [testng] [2024-04-06 02:21:34,783] [pool-1-thread-12] Initializing /data/colin/test.sfstdge.png: [testng] 02:21:34,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:21:34,784 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,786 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-06_02-21-34.log] [testng] 02:21:34,787 |-INFO in ch.qos.logback.core.sift.SiftProcessor@af5f614 - End of configuration. [testng] [2024-04-06 02:21:34,794] [pool-1-thread-11] Initializing /data/samples/phug_logo.png: [testng] 02:21:34,794 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:21:34,794 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,795 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-06_02-21-34.log] [testng] 02:21:34,796 |-INFO in ch.qos.logback.core.sift.SiftProcessor@269f7ceb - End of configuration. [testng] [2024-04-06 02:21:34,804] [pool-1-thread-10] Initializing /data/samples/orbit.png: [testng] 02:21:34,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:21:34,804 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,806 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-06_02-21-34.log] [testng] 02:21:34,807 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75421e38 - End of configuration. [testng] [2024-04-06 02:21:34,821] [pool-1-thread-9] Initializing /data/samples/william_wong02.png: [testng] 02:21:34,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:21:34,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,823 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-06_02-21-34.log] [testng] 02:21:34,824 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4c409991 - End of configuration. [testng] [2024-04-06 02:21:34,834] [pool-1-thread-8] Initializing /data/samples/Sun.png: [testng] 02:21:34,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:21:34,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,836 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-06_02-21-34.log] [testng] 02:21:34,836 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51c9ee07 - End of configuration. [testng] [2024-04-06 02:21:34,851] [pool-1-thread-7] Initializing /data/samples/joanna_viera01.png: [testng] 02:21:34,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:21:34,851 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,852 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-06_02-21-34.log] [testng] 02:21:34,853 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57af4386 - End of configuration. [testng] [2024-04-06 02:21:34,874] [pool-1-thread-6] Initializing /data/samples/StarV838.png: [testng] 02:21:34,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:21:34,875 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-06_02-21-34.log] [testng] 02:21:34,877 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15196867 - End of configuration. [testng] [2024-04-06 02:21:34,888] [pool-1-thread-5] Initializing /data/samples/PhugAnimation3.png: [testng] 02:21:34,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:21:34,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,889 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-06_02-21-34.log] [testng] 02:21:34,890 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b97707 - End of configuration. [testng] [2024-04-06 02:21:34,899] [pool-1-thread-4] Initializing /data/samples/daniel_coltri_two.png: [testng] 02:21:34,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:21:34,900 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,901 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-06_02-21-34.log] [testng] 02:21:34,901 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15c5039c - End of configuration. [testng] [2024-04-06 02:21:34,907] [pool-1-thread-3] Initializing /data/samples/chompy2.png: [testng] 02:21:34,907 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:21:34,907 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,908 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-06_02-21-34.log] [testng] 02:21:34,908 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5fc0dfad - End of configuration. [testng] [2024-04-06 02:21:34,919] [pool-1-thread-2] Initializing /data/samples/spinfox.png: [testng] 02:21:34,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:21:34,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:21:34,920 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-06_02-21-34.log] [testng] 02:21:34,921 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66d3eac0 - End of configuration. [testng] [2024-04-06 02:21:36,877] [pool-1-thread-12] Initializing /data/qa-7473/n.tif: [testng] [2024-04-06 02:21:36,937] [pool-1-thread-8] Initializing /data/samples/atom.png: [testng] [2024-04-06 02:21:36,944] [pool-1-thread-7] Initializing /data/samples/william_wong05.png: [testng] [2024-04-06 02:21:36,960] [pool-1-thread-4] Initializing /data/samples/william_wong04.png: [testng] [2024-04-06 02:21:36,966] [pool-1-thread-9] Initializing /data/samples/william_wong01.png: [testng] [2024-04-06 02:21:36,976] [pool-1-thread-11] Initializing /data/qa-7473/x.png: [testng] [2024-04-06 02:21:36,981] [pool-1-thread-2] Initializing /data/samples/Matrix.png: [testng] [2024-04-06 02:21:36,991] [pool-1-thread-10] Initializing /data/samples/daniel_coltri_one.png: [testng] [2024-04-06 02:21:37,469] [pool-1-thread-3] Initializing /data/samples/monkey_apng.png: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 10 seconds Finished: SUCCESS