Started by upstream project "BIOFORMATS-test-repo" build number 204 originally caused by: Started by upstream project "Trigger" build number 230 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins8264633688498701082.sh + '[' metamorph = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_32373_merge_ci -v /uod/idr/repos/curated/metamorph:/data -v /uod/idr-scratch/merge-ci/curated/metamorph:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 02:29:44,455 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:29:44,457 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 02:29:44,457 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:29:44,458 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:29:44,458 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:29:44,458 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:29:44,459 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:29:44,459 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:29:44,459 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:29:44,460 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:29:44,460 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:29:44,460 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:29:44,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:29:44,631 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:29:44,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:29:44,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:29:44,660 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:29:44,660 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:29:44,660 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:29:44,661 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:29:44,661 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 02:29:44,662 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 02:29:44,662 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 203 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-29 02:29:44,671] [main] java.version = 17.0.2 [testng] 02:29:44,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:29:44,674 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:29:44,715 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-29_02-29-44.log] [testng] 02:29:44,716 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-09-29 02:29:44,718] [main] testng.directory = /data [testng] [2024-09-29 02:29:44,718] [main] testng.configDirectory = /config [testng] [2024-09-29 02:29:44,727] [main] testng.multiplier = 1.0 [testng] [2024-09-29 02:29:44,728] [main] testng.in-memory = false [testng] [2024-09-29 02:29:44,728] [main] testng.allow-missing = false [testng] [2024-09-29 02:29:44,728] [main] user.language = en [testng] [2024-09-29 02:29:44,728] [main] user.country = ${user.country} [testng] [2024-09-29 02:29:44,728] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-09-29 02:42:57,527] [main] ---------------------------------------- [testng] [2024-09-29 02:42:57,527] [main] Total files: 7329 [testng] [2024-09-29 02:42:57,528] [main] Scan time: 792.799 s (108 ms/file) [testng] [2024-09-29 02:42:57,528] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 209 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-29 02:52:13,465] [pool-1-thread-1] Initializing /data/samples/zser24.stk: [testng] 02:52:13,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:52:13,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:13,466 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-29_02-52-13.log] [testng] 02:52:13,467 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ba06387 - End of configuration. [testng] [2024-09-29 02:52:14,396] [pool-1-thread-12] Initializing /data/sebastien-besson/A._WTChlor.2.nd_[Stage1__Position52_]/A. WTChlor.2_w20 Brightfield_s4.TIF: [testng] 02:52:14,396 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:52:14,397 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:14,397 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-29_02-52-14.log] [testng] 02:52:14,398 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5d192502 - End of configuration. [testng] [2024-09-29 02:52:16,834] [pool-1-thread-11] Initializing /data/pang/z-stack/Z Series.tif: [testng] 02:52:16,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:52:16,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:16,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-29_02-52-16.log] [testng] 02:52:16,836 |-INFO in ch.qos.logback.core.sift.SiftProcessor@46671bf4 - End of configuration. [testng] [2024-09-29 02:52:18,202] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t2.TIF: [testng] 02:52:18,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:52:18,202 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:18,203 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-29_02-52-18.log] [testng] 02:52:18,203 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7827b198 - End of configuration. [testng] [2024-09-29 02:52:20,468] [pool-1-thread-10] Used files list does not include base file [testng] [2024-09-29 02:52:20,470] [pool-1-thread-9] Initializing /data/andressa/RPE/Sparse/Serum/Color Combine.tif: [testng] 02:52:20,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:52:20,470 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:20,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-29_02-52-20.log] [testng] 02:52:20,471 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a76ac42 - End of configuration. [testng] [2024-09-29 02:52:21,542] [pool-1-thread-8] Initializing /data/sebastien/GA-2222 raf-1_w2Mono 475 nm.STK: [testng] 02:52:21,542 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:52:21,542 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:21,543 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-29_02-52-21.log] [testng] 02:52:21,544 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1eb2554d - End of configuration. [testng] [2024-09-29 02:52:22,772] [pool-1-thread-7] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w2Laser4914BD4BP_OverView.tif: [testng] 02:52:22,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:52:22,772 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:22,773 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-29_02-52-22.log] [testng] 02:52:22,773 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b657c49 - End of configuration. [testng] [2024-09-29 02:52:24,138] [pool-1-thread-7] Used files list does not include base file [testng] [2024-09-29 02:52:24,140] [pool-1-thread-6] Initializing /data/josh/EditedMovies/2101to400b.stk: [testng] 02:52:24,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:52:24,140 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:24,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-29_02-52-24.log] [testng] 02:52:24,141 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41730332 - End of configuration. [testng] [2024-09-29 02:52:36,213] [pool-1-thread-5] Initializing /data/samples/zserEight.stk: [testng] 02:52:36,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:52:36,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:36,214 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-29_02-52-36.log] [testng] 02:52:36,214 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d833547 - End of configuration. [testng] [2024-09-29 02:52:37,242] [pool-1-thread-4] Initializing /data/thomas/test.tif: [testng] 02:52:37,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:52:37,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:37,243 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-29_02-52-37.log] [testng] 02:52:37,244 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f65126c - End of configuration. [testng] [2024-09-29 02:52:38,398] [pool-1-thread-3] Initializing /data/benedikt/LosslessCompressedSTK.stk: [testng] 02:52:38,398 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:52:38,398 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:38,399 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-29_02-52-38.log] [testng] 02:52:38,399 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fcc9e49 - End of configuration. [testng] [2024-09-29 02:52:41,206] [pool-1-thread-2] Initializing /data/josh/2101to600e.stk: [testng] 02:52:41,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:52:41,206 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:52:41,207 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-29_02-52-41.log] [testng] 02:52:41,207 |-INFO in ch.qos.logback.core.sift.SiftProcessor@514e8813 - End of configuration. [testng] [2024-09-29 02:52:55,752] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/Color Combine.tif: [testng] [2024-09-29 02:52:57,024] [pool-1-thread-1] Initializing /data/chris-de-graffenried/2011-11-01/DOX FAZ1 568 PLK 4881_w1Cy3.stk: [testng] [2024-09-29 02:52:58,305] [pool-1-thread-11] Initializing /data/ascb/C1 Stack.stk: [testng] [2024-09-29 02:52:59,504] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t2.TIF: [testng] [2024-09-29 02:53:01,181] [pool-1-thread-8] Used files list does not include base file [testng] [2024-09-29 02:53:01,183] [pool-1-thread-9] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c1s1t1.tif: [testng] [2024-09-29 02:53:02,894] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2024-09-29 02:53:11,426] [pool-1-thread-5] Initializing /data/jae/RGB_s34.tif: [testng] [2024-09-29 02:53:13,563] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-4.tif: [testng] [2024-09-29 02:53:15,434] [pool-1-thread-9] Initializing /data/josh/EditedMovies/2101to600f.stk: [testng] [2024-09-29 02:53:24,397] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Sparse/Serum/Color Combine.tif: [testng] [2024-09-29 02:53:25,723] [pool-1-thread-3] Initializing /data/grant/XYZC_Image_w1FITC.STK: [testng] [2024-09-29 02:53:32,015] [pool-1-thread-11] Initializing /data/andressa/RPE/Sparse/Collagen/Color Combine.tif: [testng] [2024-09-29 02:53:34,507] [pool-1-thread-5] Initializing /data/ascb/golgi marker.tif: [testng] [2024-09-29 02:53:35,839] [pool-1-thread-7] Initializing /data/andressa/RPE/Full Confluency/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2024-09-29 02:53:39,095] [pool-1-thread-4] Initializing /data/jmuhlich/rgb_w1_s1_t1.TIF: [testng] [2024-09-29 02:53:42,050] [pool-1-thread-1] Initializing /data/qa-16887/m-01.tif: [testng] [2024-09-29 02:53:44,637] [pool-1-thread-11] Initializing /data/andressa/RPE/Sparse/Serum/120806_2_w1Filter DAPI.TIF: [testng] [2024-09-29 02:53:46,327] [pool-1-thread-2] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t1.TIF: [testng] [2024-09-29 02:53:48,324] [pool-1-thread-2] Used files list does not include base file [testng] [2024-09-29 02:53:49,253] [pool-1-thread-3] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t1.TIF: [testng] [2024-09-29 02:53:51,167] [pool-1-thread-3] Used files list does not include base file [testng] [2024-09-29 02:53:51,187] [pool-1-thread-5] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c1s1t11_Laser4054BD4BP.stk: [testng] [2024-09-29 02:53:52,735] [pool-1-thread-5] Used files list does not include base file [testng] [2024-09-29 02:53:58,417] [pool-1-thread-4] Initializing /data/imagesc-39526/bottom/956662_PVTom_L7day_4x_z10um_bottom_Region-1_nTiles-029_1_conf561_s1.stk: [testng] [2024-09-29 02:54:02,438] [pool-1-thread-1] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w1Filter DAPI.TIF: [testng] [2024-09-29 02:54:03,895] [pool-1-thread-10] Initializing /data/graham/G_Wright raw.stk: [testng] [2024-09-29 02:54:08,649] [pool-1-thread-7] Initializing /data/jerome/deconv.STK: [testng] [2024-09-29 02:54:11,353] [pool-1-thread-8] Initializing /data/qa-17827/G28P2E10-2 x5.TIF: [testng] [2024-09-29 02:54:12,667] [pool-1-thread-11] Initializing /data/josh/2101to600astk.stk: [testng] [2024-09-29 02:54:41,900] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w3Filter TRITC.TIF: [testng] [2024-09-29 02:54:42,987] [pool-1-thread-6] Initializing /data/qa-30870/220209_posit5.tif: [testng] [2024-09-29 02:54:44,025] [pool-1-thread-1] Initializing /data/tristan/data IJM/tl_ z/MDA_TL_z_t1.TIF: [testng] [2024-09-29 02:54:48,561] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-5.tif: [testng] [2024-09-29 02:54:49,866] [pool-1-thread-9] Initializing /data/chris/exp1_w2CSU RED_s3_t001.stk: [testng] [2024-09-29 02:54:50,977] [pool-1-thread-5] Initializing /data/andressa/RPE/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2024-09-29 02:54:53,650] [pool-1-thread-10] Initializing /data/alex/13/LJN_Y1136_13_w2FITC_t2.STK: [testng] [2024-09-29 02:54:55,260] [pool-1-thread-12] Initializing /data/heiko/metadata_3x3.jpg: [testng] [2024-09-29 02:54:55,762] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2024-09-29 02:54:57,106] [pool-1-thread-6] Initializing /data/tristan/data IJM/tl/MDA_TL_t1.TIF: [testng] [2024-09-29 02:54:59,459] [pool-1-thread-12] Initializing /data/ascb/RNA dye MT.tif: [testng] [2024-09-29 02:55:01,804] [pool-1-thread-9] Initializing /data/jayne/2celltest10fpstl65power.stk: [testng] [2024-09-29 02:55:03,952] [pool-1-thread-7] Initializing /data/ascb/mt prc1 kif4 3.tif: [testng] [2024-09-29 02:55:05,882] [pool-1-thread-1] Initializing /data/sebastien-besson/001/120119_VimMito_001_w1DIC_t1.TIF: [testng] [2024-09-29 02:55:19,170] [pool-1-thread-12] Initializing /data/grant/X.STK: [testng] [2024-09-29 02:55:20,428] [pool-1-thread-5] Initializing /data/ascb/monopolar mt aim.tif: [testng] [2024-09-29 02:55:22,238] [pool-1-thread-7] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s2_t1.TIF: [testng] [2024-09-29 02:55:23,784] [pool-1-thread-7] Used files list does not include base file [testng] [2024-09-29 02:55:23,821] [pool-1-thread-9] Initializing /data/josh/2101to600b.stk: [testng] [2024-09-29 02:55:31,650] [pool-1-thread-2] Initializing /data/imagesc-39526/20200622_GDF9_D21_MT Ovary_1/MT_Ovary-11_w1conf640_s1.stk: [testng] [2024-09-29 02:55:33,308] [pool-1-thread-3] Initializing /data/tristan/data IJM/mw2/MDA_mw2(GFP-RFP)_w1GFP.TIF: [testng] [2024-09-29 02:55:35,122] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t2.TIF: [testng] [2024-09-29 02:55:36,728] [pool-1-thread-10] Used files list does not include base file [testng] [2024-09-29 02:55:38,265] [pool-1-thread-6] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF: [testng] [2024-09-29 02:55:40,377] [pool-1-thread-8] Initializing /data/ascb/mt racgap1 dna.tif: [testng] [2024-09-29 02:55:41,570] [pool-1-thread-5] Initializing /data/bill/OX218B3/OX218B3_w1488nm- 30-_t1.STK: [testng] [2024-09-29 02:55:46,794] [pool-1-thread-12] Initializing /data/jcb/201007118/si133_J3_5_w18- 30- GFP_t1.STK: [testng] [2024-09-29 02:55:52,485] [pool-1-thread-8] Initializing /data/tristan/data IJM/mw1_z/MDA_z_MW1(GFP)_w1GFP.TIF: [testng] [2024-09-29 02:55:53,729] [pool-1-thread-3] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w1Laser4054BD4BP_OverView.tif: [testng] [2024-09-29 02:55:54,885] [pool-1-thread-3] Used files list does not include base file [testng] [2024-09-29 02:55:56,044] [pool-1-thread-4] Initializing /data/josh/EditedMovies/2101to600e.stk: [testng] [2024-09-29 02:56:03,855] [pool-1-thread-6] Initializing /data/cumol-test-series/23.001: [testng] [2024-09-29 02:56:08,267] [pool-1-thread-8] Initializing /data/ascb/mt aim.tif: [testng] [2024-09-29 02:56:10,091] [pool-1-thread-3] Initializing /data/ascb/mt prc1 kif4.tif: [testng] [2024-09-29 02:56:15,662] [pool-1-thread-8] Initializing /data/alex/15/LJN_Y1136_15_w2DAPI_t2.STK: [testng] [2024-09-29 02:56:17,580] [pool-1-thread-3] Initializing /data/graham/G_Wright deconvolved.stk: [testng] [2024-09-29 02:56:23,970] [pool-1-thread-3] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t1.TIF: [testng] [2024-09-29 02:56:25,564] [pool-1-thread-3] Used files list does not include base file [testng] [2024-09-29 02:56:25,955] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w2Filter FITC.TIF: [testng] [2024-09-29 02:56:27,143] [pool-1-thread-4] Initializing /data/sebastien-besson/new/04/04_w1Both lasers_t1.TIF: [testng] [2024-09-29 02:56:30,338] [pool-1-thread-9] Initializing /data/sebastien-besson/new/120711_D2_001/120711_D2_001_w1DUAL 491-561_t1.TIF: [testng] [2024-09-29 02:56:34,168] [pool-1-thread-10] Initializing /data/aaron/L15_CTRL_FC1d_416_Da1.stk: [testng] [2024-09-29 02:56:35,339] [pool-1-thread-7] Initializing /data/josh/EditedMovies/2101to800.stk: [testng] [2024-09-29 02:56:41,268] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w3Filter TRITC.TIF: [testng] [2024-09-29 02:56:44,136] [pool-1-thread-8] Initializing /data/jacek/YFP2trans.tif: [testng] [2024-09-29 02:56:45,484] [pool-1-thread-6] Initializing /data/josh/2101to800.stk: [testng] [2024-09-29 02:56:53,304] [pool-1-thread-10] Initializing /data/samples/10xcalib.stk: [testng] [2024-09-29 02:56:56,675] [pool-1-thread-2] Initializing /data/josh/2101to400bstk.stk: [testng] [2024-09-29 02:57:28,728] [pool-1-thread-8] Initializing /data/tristan/data IJM/mw1/MDA_mw1(GFP)_w1GFP.TIF: [testng] [2024-09-29 02:57:30,280] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF: [testng] [2024-09-29 02:57:31,402] [pool-1-thread-9] Initializing /data/chris/test2_w2_s1_t2.stk: [testng] [2024-09-29 02:57:38,391] [pool-1-thread-9] Initializing /data/alex/14/LJN_Y1136_14_w2FITC_t2.STK: [testng] [2024-09-29 02:57:40,087] [pool-1-thread-10] Initializing /data/alex/48h/48h_siGW25_w2FITC.TIF: [testng] [2024-09-29 02:57:41,650] [pool-1-thread-7] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_2_w3Filter TRITC.jpg: [testng] [2024-09-29 02:57:43,589] [pool-1-thread-8] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/120806_2_w1Filter DAPI.TIF: [testng] [2024-09-29 02:57:46,928] [pool-1-thread-7] Initializing /data/olivier/01/CDYL_D0_frap_100x_01_w1491-DOUBLE-GFP-DsRed_t1.TIF: [testng] [2024-09-29 02:57:58,018] [pool-1-thread-3] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s1_t2.TIF: [testng] [2024-09-29 02:58:00,546] [pool-1-thread-3] Used files list does not include base file [testng] [2024-09-29 02:58:00,661] [pool-1-thread-5] Initializing /data/imagesc-wafle-2020-08-18/2020-07-31 BB3084 MT3 DAY 4 reactivation/BB3084 in MT3_1_w1SDC488_s1_t1.stk: [testng] [2024-09-29 02:58:05,745] [pool-1-thread-11] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t11_w2Laser4914BD4BP_OverView.tif: [testng] [2024-09-29 02:58:06,869] [pool-1-thread-11] Used files list does not include base file [testng] [2024-09-29 02:58:07,021] [pool-1-thread-6] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.jpg: [testng] [2024-09-29 02:58:10,217] [pool-1-thread-9] Initializing /data/steve/Experiment2.stk: [testng] [2024-09-29 02:58:11,500] [pool-1-thread-10] Initializing /data/alex/Selected FITC.stk: [testng] [2024-09-29 02:58:12,878] [pool-1-thread-8] Initializing /data/lee/20130116-u2os-celldensitytest-72h-96h_m08_s9_w2766e46f1-81be-45a2-88b1-abe8da58c47a.tif: [testng] [2024-09-29 02:58:14,307] [pool-1-thread-6] Initializing /data/qa-16915/m-04.tif: [testng] [2024-09-29 02:58:19,482] [pool-1-thread-9] Initializing /data/jacques/Repositionnement/Repositionnement_s1_t1.TIF: [testng] [2024-09-29 02:58:22,238] [pool-1-thread-10] Initializing /data/andressa/RPE/Full Confluency/Serum/Color Combine.tif: [testng] [2024-09-29 02:58:24,444] [pool-1-thread-8] Initializing /data/qa-16915/m-02.tif: [testng] [2024-09-29 02:58:26,408] [pool-1-thread-11] Initializing /data/mike/TEST 1_7_w2EN GFP_s1_t61.STK: [testng] [2024-09-29 02:58:27,467] [pool-1-thread-6] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_2_w1Filter DAPI.TIF: [testng] [2024-09-29 02:58:31,998] [pool-1-thread-10] Initializing /data/david/tl4.tif: [testng] [2024-09-29 02:58:37,454] [pool-1-thread-11] Initializing /data/samples/single-series-test/test_w1.TIF: [testng] [2024-09-29 02:58:39,705] [pool-1-thread-8] Initializing /data/qa-16915/m-01.tif: [testng] [2024-09-29 02:58:49,637] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w2Filter FITC.TIF: [testng] [2024-09-29 02:58:51,839] [pool-1-thread-8] Initializing /data/jcb/201008090/Color Combine.stk: [testng] [2024-09-29 02:58:53,081] [pool-1-thread-11] Initializing /data/lee/397_w1447 laser_s17_t1_bad.TIF: [testng] [2024-09-29 02:58:54,363] [pool-1-thread-6] Initializing /data/aaron/metamorph.stk: [testng] [2024-09-29 02:58:59,614] [pool-1-thread-10] Initializing /data/chris/exp1_w1CSU GREEN_s3_t002.stk: [testng] [2024-09-29 02:59:01,337] [pool-1-thread-6] Initializing /data/andressa/RPE/Full Confluency/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2024-09-29 02:59:02,547] [pool-1-thread-8] Initializing /data/qa-16915/m-02-561.ome.tif: [testng] [2024-09-29 02:59:04,108] [pool-1-thread-11] Initializing /data/qa-16915/m-01-488.ome.tif: [testng] [2024-09-29 02:59:06,798] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Sparse/Collagen/Color Combine.tif: [testng] [2024-09-29 02:59:10,671] [pool-1-thread-10] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s1_t1.TIF: [testng] [2024-09-29 02:59:12,311] [pool-1-thread-10] Used files list does not include base file [testng] [2024-09-29 02:59:13,251] [pool-1-thread-9] Initializing /data/chris/Foo/exp1_w1_s1_t1.tif: [testng] [2024-09-29 02:59:47,512] [pool-1-thread-11] Initializing /data/ascb/RNA dye MT 2.tif: [testng] [2024-09-29 02:59:48,975] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w2561-620-60-TR_s2_t2.TIF: [testng] [2024-09-29 02:59:51,128] [pool-1-thread-8] Used files list does not include base file [testng] [2024-09-29 02:59:51,163] [pool-1-thread-3] Initializing /data/steve/Experiment2.tif: [testng] [2024-09-29 02:59:54,837] [pool-1-thread-6] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_3_w2Filter FITC.TIF: [testng] [2024-09-29 02:59:58,946] [pool-1-thread-11] Initializing /data/andressa/RPE/Full Confluency/Fibronectin/Color Combine.tif: [testng] [2024-09-29 03:00:01,312] [pool-1-thread-3] Initializing /data/bill/FromBillM_New_MM_MDAdata/RWeD62u7dF1Mom1_w1CelegansDIC 100x_t1.TIF: [testng] [2024-09-29 03:00:10,878] [pool-1-thread-6] Initializing /data/qa-31304/Well _C6_1.tif: [testng] [2024-09-29 03:00:15,921] [pool-1-thread-11] Initializing /data/qa-16907/1_w1Single SPI 405.TIF: [testng] [2024-09-29 03:00:20,766] [pool-1-thread-6] Initializing /data/andressa/RPE/Full Confluency/Collagen/Color Combine 2.tif: [testng] [2024-09-29 03:00:27,618] [pool-1-thread-10] Initializing /data/chris-de-graffenried/2011-05-30/ND C4 488 PLK 5682_w1sRFP.stk: [testng] [2024-09-29 03:00:29,701] [pool-1-thread-6] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_2_w2Filter FITC.TIF: [testng] [2024-09-29 03:00:34,390] [pool-1-thread-11] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2_001_w1DUAL 491-561_t1.TIF: [testng] [2024-09-29 03:00:39,399] [pool-1-thread-6] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine.tif: [testng] [2024-09-29 03:00:46,023] [pool-1-thread-6] Initializing /data/jcb/201008090/3T3_ShhN_C_Chh488.stk: [testng] [2024-09-29 03:00:50,195] [pool-1-thread-2] Initializing /data/chris/exp1_w2CSU RED_s3_t003.stk: [testng] [2024-09-29 03:00:51,216] [pool-1-thread-10] Initializing /data/grant/XYZCT_Image_w1FITC_t1.STK: [testng] [2024-09-29 03:00:52,505] [pool-1-thread-8] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t41_w1Laser4054BD4BP_t1.stk: [testng] [2024-09-29 03:00:54,938] [pool-1-thread-6] Initializing /data/sebastien-besson/plk1/plk1_561nm_eb3_3_t1.TIF: [testng] [2024-09-29 03:00:57,707] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w1Filter DAPI.TIF: [testng] [2024-09-29 03:01:01,464] [pool-1-thread-3] Initializing /data/sebastien-besson/new/D2Test/120711/120711_D2Test_001_w1DUAL 491-561.TIF: [testng] [2024-09-29 03:01:02,395] [pool-1-thread-11] Initializing /data/samples/10xcalib.tif: [testng] [2024-09-29 03:01:06,138] [pool-1-thread-2] Initializing /data/qa-16915/m-02-488.ome.tif: [testng] [2024-09-29 03:01:08,925] [pool-1-thread-6] Initializing /data/josh/EKM49/EKM49_w2568 -TRITC-_t1.TIF: [testng] [2024-09-29 03:01:11,622] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge.TIF: [testng] [2024-09-29 03:01:16,139] [pool-1-thread-3] Initializing /data/qa-16915/m-04-488.tif: [testng] [2024-09-29 03:01:17,848] [pool-1-thread-2] Initializing /data/aaron/RR11_2 TRAINED mid lobIX 63X GFP568_s1.STK: [testng] [2024-09-29 03:01:19,087] [pool-1-thread-12] Initializing /data/josh/EditedMovies/2101to600a.stk: [testng] [2024-09-29 03:01:33,708] [pool-1-thread-8] Initializing /data/tristan/data IJM/mw3_z/MDA_z_MW3(GFP_RFP_GLP)_w3GLP.TIF: [testng] [2024-09-29 03:01:34,879] [pool-1-thread-11] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment5_w1DUAL 491-561_t1.TIF: [testng] [2024-09-29 03:01:38,333] [pool-1-thread-10] Initializing /data/jcb/201008090/3T3_ShhN_C_Nhh594.stk: [testng] [2024-09-29 03:01:39,351] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.tif: [testng] [2024-09-29 03:01:40,751] [pool-1-thread-3] Initializing /data/ved/Expt01_w1CFP FRET-S ND0.5_t1.TIF: [testng] [2024-09-29 03:01:47,623] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Sparse/Fibronectin/Color Combine.tif: [testng] [2024-09-29 03:01:50,063] [pool-1-thread-2] Initializing /data/chris/exp1_w2CSU RED_s3_t002.stk: [testng] [2024-09-29 03:01:54,138] [pool-1-thread-10] Initializing /data/qa-16915/m-01-561.ome.tif: [testng] [2024-09-29 03:01:56,536] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w3Filter TRITC.TIF: [testng] [2024-09-29 03:01:57,762] [pool-1-thread-8] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s4t41_w1Laser4054BD4BP_s1_t1.stk: [testng] [2024-09-29 03:01:59,582] [pool-1-thread-4] Initializing /data/tristan/data IJM/mw3/MDA_MW3(GFP-RFP-GLP)_w1GFP.TIF: [testng] [2024-09-29 03:02:03,705] [pool-1-thread-10] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/Color Combine-3.tif: [testng] [2024-09-29 03:02:05,769] [pool-1-thread-2] Initializing /data/andressa/RPE/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2024-09-29 03:02:10,402] [pool-1-thread-10] Initializing /data/ascb/golgi marker 2.tif: [testng] [2024-09-29 03:02:16,807] [pool-1-thread-4] Initializing /data/jmuhlich/metamorph_scan_rgb/Scan 20x obj 40_w1_s1_t1.TIF: [testng] [2024-09-29 03:02:18,361] [pool-1-thread-10] Initializing /data/samples/test-plate/test_s10_t1.tif: [testng] [2024-09-29 03:02:32,226] [pool-1-thread-3] Initializing /data/josh/EditedMovies/2101to600b.stk: [testng] [2024-09-29 03:02:39,968] [pool-1-thread-2] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/120806_Confluent_Col_MCF10A_2_Merge_contrast.jpg: [testng] [2024-09-29 03:02:42,678] [pool-1-thread-12] Initializing /data/chris/exp1_w1CSU GREEN_s3_t001.stk: [testng] [2024-09-29 03:02:44,581] [pool-1-thread-2] Initializing /data/sebastien-besson/002/120119_VimMito_002_w1DIC_t1.TIF: [testng] [2024-09-29 03:02:56,547] [pool-1-thread-12] Initializing /data/doil/001-23 dapi.stk: [testng] [2024-09-29 03:03:05,126] [pool-1-thread-4] Initializing /data/strand/TS_200nm_3_w2Fluo GFP -100-.TIF: [testng] [2024-09-29 03:03:18,789] [pool-1-thread-4] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w3DIC Confocal_s2_t2.TIF: [testng] [2024-09-29 03:03:20,256] [pool-1-thread-4] Used files list does not include base file [testng] [2024-09-29 03:03:25,710] [pool-1-thread-3] Initializing /data/gh-2613/ScanSlide_exp1_rep0_w1confGFP_s1.tif: [testng] [2024-09-29 03:03:27,275] [pool-1-thread-6] Initializing /data/stephane/Lame7-E5-Y+-001.stk: [testng] [2024-09-29 03:03:33,269] [pool-1-thread-6] Initializing /data/jcb/201008090/3T3_ShhN_C_DIC.stk: [testng] [2024-09-29 03:03:35,176] [pool-1-thread-3] Initializing /data/josh/2101to600f.stk: [testng] [2024-09-29 03:03:53,511] [pool-1-thread-6] Initializing /data/sebastian/CLC2_GFP root4/0.1% DMSO root4001.tif: [testng] [2024-09-29 03:04:00,390] [pool-1-thread-6] Initializing /data/grant/Scale_bar_100um_XY_image.TIF: [testng] [2024-09-29 03:04:09,217] [pool-1-thread-8] Initializing /data/andressa/MCF-10A/Full Confluency/Collagen/Color Combine-2.tif: [testng] [2024-09-29 03:04:13,490] [pool-1-thread-6] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment4_w1CFP-YFP FRET 446.TIF: [testng] [2024-09-29 03:04:17,839] [pool-1-thread-8] Initializing /data/grant/XYZ_Image.STK: [testng] [2024-09-29 03:04:20,281] [pool-1-thread-4] Initializing /data/dave/Z Series.stk: [testng] [2024-09-29 03:04:21,578] [pool-1-thread-12] Initializing /data/thomas/t_test2001.tif: [testng] [2024-09-29 03:04:26,979] [pool-1-thread-4] Initializing /data/chris-de-graffenried/ND C4 488 PLK 5682_w1sRFP.stk: [testng] [2024-09-29 03:04:28,823] [pool-1-thread-12] Initializing /data/heiko/sample_3x3.stk: [testng] [2024-09-29 03:04:32,560] [pool-1-thread-8] Initializing /data/lee/IXMtest_P24_s9_w560D948A4-4D16-49D0-9080-7575267498F9.tif: [testng] [2024-09-29 03:04:33,675] [pool-1-thread-6] Initializing /data/sebastien-besson/new/D2Test/120711/Experiment3_w1CFP-YFP FRET 446.TIF: [testng] [2024-09-29 03:04:39,151] [pool-1-thread-12] Initializing /data/gh-2613/ScanSlide_exp1_rep1_w1confGFP_s1.stk: [testng] [2024-09-29 03:04:40,544] [pool-1-thread-8] Initializing /data/samples/zserSixteen.stk: [testng] [2024-09-29 03:04:45,671] [pool-1-thread-11] Initializing /data/andressa/MCF-10A/Sparse/Serum/120806_1_w1Filter DAPI.TIF: [testng] [2024-09-29 03:04:48,376] [pool-1-thread-8] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s1t11_w1Laser4054BD4BP.tif: [testng] [2024-09-29 03:04:51,004] [pool-1-thread-6] Initializing /data/josh/EditedMovies/2101to400a.stk: [testng] [2024-09-29 03:04:56,685] [pool-1-thread-4] Initializing /data/andressa/MCF-10A/Sparse/Collagen/120806_1_w1Filter DAPI.TIF: [testng] [2024-09-29 03:05:06,214] [pool-1-thread-8] Initializing /data/heiko/sample_2x2.stk: [testng] [2024-09-29 03:05:09,846] [pool-1-thread-11] Initializing /data/samples/zseries.stk: [testng] [2024-09-29 03:05:13,923] [pool-1-thread-8] Initializing /data/chris/test2_w2_s1_t1.stk: [testng] [2024-09-29 03:05:16,001] [pool-1-thread-12] Initializing /data/hms/HCT116_w1Phase FITC_s7_t1.TIF: [testng] [2024-09-29 03:05:47,249] [pool-1-thread-3] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_4_w3Filter TRITC.TIF: [testng] [2024-09-29 03:05:48,216] [pool-1-thread-11] Initializing /data/dan/CavAlpha1D_51490_engG4_F_101111_1.tif: [testng] [2024-09-29 03:05:48,994] [pool-1-thread-4] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z1c2s4t12_w1Laser4054BD4BP_OverView.tif: [testng] [2024-09-29 03:05:49,949] [pool-1-thread-4] Used files list does not include base file [testng] [2024-09-29 03:05:51,438] [pool-1-thread-8] Initializing /data/mat/MM_NDSTACK/TEST6_thumb_w1491-525-50-FITC_s1_t1.TIF: [testng] [2024-09-29 03:05:52,856] [pool-1-thread-8] Used files list does not include base file [testng] [2024-09-29 03:05:55,234] [pool-1-thread-3] Initializing /data/chris/Stream-2(partial).stk: [testng] [2024-09-29 03:05:58,061] [pool-1-thread-6] Initializing /data/fabrice/100722ac-2_w1RED_s1_t1.TIF: [testng] [2024-09-29 03:06:00,266] [pool-1-thread-11] Initializing /data/qa-16915/m-04-561.tif: [testng] [2024-09-29 03:06:03,759] [pool-1-thread-4] Initializing /data/chris/exp1_w1_s1_t1.tif: [testng] [2024-09-29 03:06:04,810] [pool-1-thread-5] Initializing /data/andressa/MCF-10A/Full Confluency/Fibronectin/120806_1_w1Filter DAPI.TIF: [testng] [2024-09-29 03:06:06,253] [pool-1-thread-6] Initializing /data/andressa/RPE/Sparse/Fibronectin/Color Combine.tif: [testng] [2024-09-29 03:06:08,474] [pool-1-thread-11] Initializing /data/ascb/mt prc1 kif4 1.tif: [testng] [2024-09-29 03:06:10,557] [pool-1-thread-4] Initializing /data/ascb/mt prc1 kif4 2.tif: [testng] [2024-09-29 03:06:13,043] [pool-1-thread-5] Initializing /data/jan-eglinger/benchmark_v1_2018_x64y64z5c2s1t11_w1Laser4054BD4BP.stk: [testng] [2024-09-29 03:06:15,551] [pool-1-thread-6] Initializing /data/josh/2101to400astk.stk: [testng] [2024-09-29 03:06:23,622] [pool-1-thread-3] Initializing /data/ascb/C9 Stack.tif: [testng] [2024-09-29 03:06:25,792] [pool-1-thread-12] Initializing /data/ascb/mt mklp1.tif: [testng] [2024-09-29 03:06:26,690] [pool-1-thread-11] Initializing /data/samples/diatoms3d.stk: [testng] 04:49:31,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:49:31,842 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:49:31,843 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-29_04-49-31.log] [testng] 04:49:31,844 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ef54607 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 11077, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 139 minutes 52 seconds Finished: SUCCESS