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Started by upstream project "BIOFORMATS-test-repo" build number 205 originally caused by: Started by upstream project "Trigger" build number 231 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins15522518563767670934.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_32455_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:23:22,504 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:23:22,506 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:23:22,506 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:23:22,508 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:23:22,508 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:23:22,508 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:23:22,508 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:23:22,508 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:23:22,509 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:23:22,509 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:23:22,509 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:23:22,510 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:23:22,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:23:22,745 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:23:22,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:23:22,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:23:22,781 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:23:22,781 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:23:22,781 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:23:22,782 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:23:22,782 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:23:22,783 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:23:22,783 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 274 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-30 01:23:22,792] [main] java.version = 1.8.0_342 [testng] 01:23:22,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:23:22,796 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:22,840 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-30_01-23-22.log] [testng] 01:23:22,842 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-09-30 01:23:22,844] [main] testng.directory = /data [testng] [2024-09-30 01:23:22,844] [main] testng.configDirectory = /config [testng] [2024-09-30 01:23:22,856] [main] testng.multiplier = 1.0 [testng] [2024-09-30 01:23:22,856] [main] testng.in-memory = false [testng] [2024-09-30 01:23:22,856] [main] testng.allow-missing = false [testng] [2024-09-30 01:23:22,856] [main] user.language = fr [testng] [2024-09-30 01:23:22,856] [main] user.country = FR [testng] [2024-09-30 01:23:22,856] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-09-30 01:23:24,719] [main] ---------------------------------------- [testng] [2024-09-30 01:23:24,719] [main] Total files: 103 [testng] [2024-09-30 01:23:24,719] [main] Scan time: 1.863 s (18 ms/file) [testng] [2024-09-30 01:23:24,719] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-30 01:23:45,124] [pool-1-thread-1] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] 01:23:45,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:45,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:45,126 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-30_01-23-45.log] [testng] 01:23:45,127 |-INFO in ch.qos.logback.core.sift.SiftProcessor@415546f - End of configuration. [testng] [2024-09-30 01:23:45,223] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] 01:23:45,223 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:45,224 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:45,224 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-30_01-23-45.log] [testng] 01:23:45,225 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44731266 - End of configuration. [testng] [2024-09-30 01:23:45,748] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] 01:23:45,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:45,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:45,749 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-30_01-23-45.log] [testng] 01:23:45,750 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7b1f401d - End of configuration. [testng] [2024-09-30 01:23:45,834] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] 01:23:45,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:45,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:45,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-30_01-23-45.log] [testng] 01:23:45,836 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3ec13fa3 - End of configuration. [testng] [2024-09-30 01:23:46,524] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] 01:23:46,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:46,525 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:46,525 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-30_01-23-46.log] [testng] 01:23:46,526 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37036918 - End of configuration. [testng] [2024-09-30 01:23:46,617] [pool-1-thread-8] Initializing /data/jay/dnasample1.dm3: [testng] 01:23:46,617 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:46,617 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:46,618 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-30_01-23-46.log] [testng] 01:23:46,619 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63212720 - End of configuration. [testng] [2024-09-30 01:23:46,761] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] 01:23:46,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:46,761 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:46,762 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-30_01-23-46.log] [testng] 01:23:46,762 |-INFO in ch.qos.logback.core.sift.SiftProcessor@370db904 - End of configuration. [testng] [2024-09-30 01:23:46,972] [pool-1-thread-6] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] 01:23:46,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:46,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:46,973 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-30_01-23-46.log] [testng] 01:23:46,973 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40ef7379 - End of configuration. [testng] [2024-09-30 01:23:47,059] [pool-1-thread-5] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 01:23:47,060 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:47,060 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:47,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-30_01-23-47.log] [testng] 01:23:47,061 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f327e63 - End of configuration. [testng] [2024-09-30 01:23:47,151] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] 01:23:47,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:47,151 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:47,152 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-30_01-23-47.log] [testng] 01:23:47,152 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a9dae5f - End of configuration. [testng] [2024-09-30 01:23:47,255] [pool-1-thread-3] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] 01:23:47,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:47,255 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:47,256 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-30_01-23-47.log] [testng] 01:23:47,256 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71be1ff1 - End of configuration. [testng] [2024-09-30 01:23:47,444] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 01:23:47,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:47,444 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:47,445 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-30_01-23-47.log] [testng] 01:23:47,446 |-INFO in ch.qos.logback.core.sift.SiftProcessor@17e1ea86 - End of configuration. [testng] [2024-09-30 01:23:51,843] [pool-1-thread-7] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-09-30 01:23:51,932] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-09-30 01:23:52,025] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-09-30 01:23:52,557] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-09-30 01:23:52,657] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-09-30 01:23:54,535] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-09-30 01:23:54,831] [pool-1-thread-1] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-09-30 01:23:54,989] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-09-30 01:23:55,229] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-09-30 01:23:56,344] [pool-1-thread-1] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-09-30 01:23:56,572] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-09-30 01:23:56,652] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-09-30 01:23:56,799] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-09-30 01:23:57,461] [pool-1-thread-7] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-09-30 01:23:57,719] [pool-1-thread-12] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-09-30 01:23:57,914] [pool-1-thread-1] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-09-30 01:23:58,050] [pool-1-thread-10] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-09-30 01:23:58,453] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-09-30 01:23:58,683] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-09-30 01:23:58,872] [pool-1-thread-9] Initializing /data/qa-7642/8.dm4: [testng] [2024-09-30 01:23:59,034] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-09-30 01:23:59,972] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-09-30 01:24:00,530] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3: [testng] [2024-09-30 01:24:00,637] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-09-30 01:24:01,042] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-09-30 01:24:01,160] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-09-30 01:24:01,567] [pool-1-thread-9] Initializing /data/jay/DMtest.dm3: [testng] [2024-09-30 01:24:03,070] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-09-30 01:24:03,413] [pool-1-thread-12] Initializing /data/ofra/lowloss.dm3: [testng] [2024-09-30 01:24:04,249] [pool-1-thread-10] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-09-30 01:24:05,707] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-09-30 01:24:05,965] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-09-30 01:24:06,142] [pool-1-thread-2] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-09-30 01:24:07,543] [pool-1-thread-11] Initializing /data/melissa/annotation-test.tif: [testng] [2024-09-30 01:24:08,675] [pool-1-thread-12] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-09-30 01:24:08,867] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-09-30 01:24:10,885] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-09-30 01:24:13,292] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-09-30 01:24:13,641] [pool-1-thread-1] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-09-30 01:24:13,792] [pool-1-thread-10] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-09-30 01:24:14,543] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-09-30 01:24:15,414] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-09-30 01:24:15,653] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-09-30 01:24:16,147] [pool-1-thread-9] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-09-30 01:24:17,385] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-09-30 01:24:17,856] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-09-30 01:24:18,452] [pool-1-thread-12] Initializing /data/samples/test-tiles.dm3: [testng] [2024-09-30 01:24:18,810] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-09-30 01:24:19,509] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-09-30 01:24:20,247] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-09-30 01:24:20,846] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-09-30 01:24:20,947] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-09-30 01:24:21,043] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-09-30 01:24:21,766] [pool-1-thread-12] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-09-30 01:24:21,884] [pool-1-thread-3] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-09-30 01:24:23,546] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-09-30 01:24:23,812] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-09-30 01:24:24,552] [pool-1-thread-5] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-09-30 01:24:25,297] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-09-30 01:24:26,057] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-09-30 01:24:27,612] [pool-1-thread-7] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-09-30 01:24:28,417] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-09-30 01:24:29,277] [pool-1-thread-10] Initializing /data/jay/smallerfile.dm3: [testng] [2024-09-30 01:24:29,936] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-09-30 01:24:30,819] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-09-30 01:24:31,295] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-09-30 01:24:31,898] [pool-1-thread-3] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-09-30 01:24:32,104] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-09-30 01:24:32,373] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-09-30 01:24:33,159] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-09-30 01:24:34,107] [pool-1-thread-5] Initializing /data/jay/DMtest2.dm3: [testng] [2024-09-30 01:24:34,403] [pool-1-thread-12] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-09-30 01:24:34,746] [pool-1-thread-9] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-09-30 01:24:36,150] [pool-1-thread-10] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-09-30 01:24:37,405] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-09-30 01:24:37,706] [pool-1-thread-3] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-09-30 01:24:38,963] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-09-30 01:24:39,761] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-09-30 01:24:40,606] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-09-30 01:24:40,899] [pool-1-thread-11] Initializing /data/qa-21761/example.dm4: [testng] [2024-09-30 01:24:41,071] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-09-30 01:24:41,701] [pool-1-thread-9] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-09-30 01:24:42,151] [pool-1-thread-10] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-09-30 01:24:43,099] [pool-1-thread-6] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-09-30 01:24:43,526] [pool-1-thread-5] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-09-30 01:24:43,929] [pool-1-thread-11] Initializing /data/jay/dnasample.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 32 seconds Finished: SUCCESS