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Started by upstream project "BIOFORMATS-test-repo" build number 205 originally caused by: Started by upstream project "Trigger" build number 231 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder [BIOFORMATS-test-folder] $ /bin/bash -xe /tmp/jenkins14094748522834019713.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_32581_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 03:28:08,842 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:28:08,844 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 03:28:08,844 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:28:08,845 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:28:08,845 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:28:08,845 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:28:08,846 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:28:08,846 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:28:08,846 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:28:08,846 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:28:08,846 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:28:08,846 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:28:09,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:28:09,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:28:09,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:28:09,097 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:28:09,106 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:28:09,106 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:28:09,106 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:28:09,106 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:28:09,106 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 03:28:09,107 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 03:28:09,107 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 261 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-09-30 03:28:09,117] [main] java.version = 1.8.0_342 [testng] 03:28:09,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:28:09,121 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:28:09,176 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-30_03-28-09.log] [testng] 03:28:09,178 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-09-30 03:28:09,180] [main] testng.directory = /data [testng] [2024-09-30 03:28:09,180] [main] testng.configDirectory = /config [testng] [2024-09-30 03:28:09,193] [main] testng.multiplier = 1.0 [testng] [2024-09-30 03:28:09,194] [main] testng.in-memory = false [testng] [2024-09-30 03:28:09,194] [main] testng.allow-missing = false [testng] [2024-09-30 03:28:09,194] [main] user.language = fr [testng] [2024-09-30 03:28:09,194] [main] user.country = FR [testng] [2024-09-30 03:28:09,194] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-09-30 03:29:13,761] [main] ---------------------------------------- [testng] [2024-09-30 03:29:13,761] [main] Total files: 15735 [testng] [2024-09-30 03:29:13,761] [main] Scan time: 64.567 s (4 ms/file) [testng] [2024-09-30 03:29:13,761] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-09-30 03:31:07,513] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] 03:31:07,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:31:07,513 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:07,514 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-09-30_03-31-07.log] [testng] 03:31:07,514 |-INFO in ch.qos.logback.core.sift.SiftProcessor@417a978c - End of configuration. [testng] [2024-09-30 03:31:08,413] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] 03:31:08,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:31:08,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:08,413 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-09-30_03-31-08.log] [testng] 03:31:08,414 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b484d56 - End of configuration. [testng] [2024-09-30 03:31:09,529] [pool-1-thread-11] Initializing /data/converted/stephan/notok2.tif: [testng] 03:31:09,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:31:09,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:09,530 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-09-30_03-31-09.log] [testng] 03:31:09,530 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6edd068 - End of configuration. [testng] [2024-09-30 03:31:10,704] [pool-1-thread-10] Initializing /data/converted/lior/live+cf2b.tif: [testng] 03:31:10,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:31:10,704 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:10,705 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-09-30_03-31-10.log] [testng] 03:31:10,705 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9c485b2 - End of configuration. [testng] [2024-09-30 03:31:11,414] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] 03:31:11,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:31:11,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:11,415 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-09-30_03-31-11.log] [testng] 03:31:11,415 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e2b7f44 - End of configuration. [testng] [2024-09-30 03:31:13,147] [pool-1-thread-8] Initializing /data/converted/converted/damian-compressed.tif: [testng] 03:31:13,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:31:13,147 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:13,147 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-09-30_03-31-13.log] [testng] 03:31:13,148 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6a4d3e03 - End of configuration. [testng] [2024-09-30 03:31:14,162] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] 03:31:14,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:31:14,162 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:14,163 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-09-30_03-31-14.log] [testng] 03:31:14,163 |-INFO in ch.qos.logback.core.sift.SiftProcessor@161558e3 - End of configuration. [testng] [2024-09-30 03:31:15,120] [pool-1-thread-6] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] 03:31:15,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:31:15,120 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:15,120 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-09-30_03-31-15.log] [testng] 03:31:15,121 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c675e3f - End of configuration. [testng] [2024-09-30 03:31:16,301] [pool-1-thread-5] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] 03:31:16,301 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:31:16,301 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:16,301 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-09-30_03-31-16.log] [testng] 03:31:16,302 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56bdb2b6 - End of configuration. [testng] [2024-09-30 03:31:17,734] [pool-1-thread-4] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] 03:31:17,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:31:17,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:17,734 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-09-30_03-31-17.log] [testng] 03:31:17,735 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c28800 - End of configuration. [testng] [2024-09-30 03:31:19,594] [pool-1-thread-3] Initializing /data/converted/lior/live+cf5b.tif: [testng] 03:31:19,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:31:19,594 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:19,595 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-09-30_03-31-19.log] [testng] 03:31:19,595 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66edcb42 - End of configuration. [testng] [2024-09-30 03:31:20,870] [pool-1-thread-2] Initializing /data/converted/converted/mri-stack.tif: [testng] 03:31:20,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:31:20,870 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:31:20,870 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-09-30_03-31-20.log] [testng] 03:31:20,871 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5059a5a7 - End of configuration. [testng] [2024-09-30 03:31:56,546] [pool-1-thread-2] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-09-30 03:31:58,271] [pool-1-thread-8] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-09-30 03:31:59,685] [pool-1-thread-1] Initializing /data/scott/Slide133-11.tif: [testng] [2024-09-30 03:32:25,629] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-09-30 03:32:27,490] [pool-1-thread-3] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-09-30 03:32:29,402] [pool-1-thread-10] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-09-30 03:32:31,241] [pool-1-thread-1] Initializing /data/converted/dietmar/137.tif: [testng] [2024-09-30 03:32:41,543] [pool-1-thread-8] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-09-30 03:33:02,483] [pool-1-thread-10] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-09-30 03:33:39,174] [pool-1-thread-11] Initializing /data/converted/michel/a.tif: [testng] [2024-09-30 03:34:05,137] [pool-1-thread-11] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-09-30 03:34:49,020] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-09-30 03:37:13,089] [pool-1-thread-8] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-09-30 03:38:56,595] [pool-1-thread-11] Initializing /data/scott/Slide133-04.tif: [testng] [2024-09-30 03:39:20,563] [pool-1-thread-3] Initializing /data/converted/converted/2chz.tif: [testng] [2024-09-30 03:39:41,014] [pool-1-thread-11] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-09-30 03:39:53,657] [pool-1-thread-9] Initializing /data/scott/Slide133-01.tif: [testng] [2024-09-30 03:40:21,746] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-09-30 03:40:35,591] [pool-1-thread-7] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-09-30 03:40:38,128] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-09-30 03:40:40,191] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-09-30 03:40:49,553] [pool-1-thread-11] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-09-30 03:41:05,911] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-09-30 03:41:26,261] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-09-30 03:41:32,914] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-09-30 03:41:52,300] [pool-1-thread-8] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-09-30 03:42:13,976] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-09-30 03:42:16,677] [pool-1-thread-12] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-09-30 03:42:45,896] [pool-1-thread-12] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-09-30 03:43:07,561] [pool-1-thread-3] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-09-30 03:43:58,898] [pool-1-thread-3] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2024-09-30 03:44:59,508] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-09-30 03:45:09,845] [pool-1-thread-10] Initializing /data/converted/michel/b.tif: [testng] [2024-09-30 03:45:51,546] [pool-1-thread-8] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-09-30 03:45:59,425] [pool-1-thread-10] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-09-30 03:46:27,520] [pool-1-thread-11] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-09-30 03:46:48,937] [pool-1-thread-8] Initializing /data/scott/Slide133-08.tif: [testng] [2024-09-30 03:46:53,149] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-09-30 03:47:12,706] [pool-1-thread-8] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-09-30 03:47:31,452] [pool-1-thread-8] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-09-30 03:47:34,177] [pool-1-thread-10] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-09-30 03:47:46,603] [pool-1-thread-3] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-09-30 03:48:07,439] [pool-1-thread-10] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-09-30 03:48:57,406] [pool-1-thread-9] Initializing /data/othmar/mozaic.tif: [testng] [2024-09-30 03:49:40,335] [pool-1-thread-1] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-09-30 03:50:00,197] [pool-1-thread-1] Initializing /data/converted/nicolas/image.tif: [testng] [2024-09-30 03:50:21,669] [pool-1-thread-1] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-09-30 03:50:25,157] [pool-1-thread-5] Initializing /data/converted/converted/damian.tif: [testng] [2024-09-30 03:50:37,628] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-09-30 03:50:45,884] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-09-30 03:51:02,658] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-09-30 03:52:29,869] [pool-1-thread-4] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-09-30 03:52:34,203] [pool-1-thread-9] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-09-30 03:52:51,724] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-09-30 03:52:56,889] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-09-30 03:53:09,675] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-09-30 03:54:35,687] [pool-1-thread-11] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-09-30 03:54:57,923] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-09-30 03:55:02,083] [pool-1-thread-1] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-09-30 03:55:28,935] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-09-30 03:55:57,198] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-09-30 03:56:07,745] [pool-1-thread-4] Initializing /data/converted/michel/e.tif: [testng] [2024-09-30 03:56:37,116] [pool-1-thread-10] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-09-30 03:56:49,919] [pool-1-thread-4] Initializing /data/converted/sebastien/test.tif: [testng] [2024-09-30 03:56:54,117] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-09-30 03:58:12,771] [pool-1-thread-9] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-09-30 03:58:19,695] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-09-30 03:58:26,836] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-09-30 03:58:33,807] [pool-1-thread-9] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-09-30 03:58:54,422] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-09-30 04:00:48,252] [pool-1-thread-3] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-09-30 04:02:17,064] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-09-30 04:02:52,697] [pool-1-thread-7] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-09-30 04:03:19,653] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-09-30 04:03:36,391] [pool-1-thread-2] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-09-30 04:03:53,681] [pool-1-thread-1] Initializing /data/converted/dietmar/138.tif: [testng] [2024-09-30 04:06:26,678] [pool-1-thread-2] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-09-30 04:06:49,530] [pool-1-thread-2] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-09-30 04:07:17,635] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-09-30 04:07:56,127] [pool-1-thread-4] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-09-30 04:10:05,192] [pool-1-thread-1] Initializing /data/converted/michel/c.tif: [testng] [2024-09-30 04:10:08,520] [pool-1-thread-10] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-09-30 04:10:33,803] [pool-1-thread-10] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-09-30 04:10:36,734] [pool-1-thread-1] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-09-30 04:10:57,051] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-09-30 04:11:04,236] [pool-1-thread-10] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-09-30 04:11:28,859] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-09-30 04:12:13,771] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-09-30 04:12:58,074] [pool-1-thread-2] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-09-30 04:13:07,089] [pool-1-thread-4] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-09-30 04:13:28,363] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-09-30 04:14:15,891] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-09-30 04:14:17,246] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-09-30 04:15:18,768] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-09-30 04:16:15,657] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-09-30 04:16:25,700] [pool-1-thread-1] Initializing /data/converted/michel/d.tif: [testng] [2024-09-30 04:16:33,613] [pool-1-thread-10] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-09-30 04:16:46,954] [pool-1-thread-1] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-09-30 04:17:41,804] [pool-1-thread-3] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-09-30 04:17:47,608] [pool-1-thread-10] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-09-30 04:17:53,829] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-09-30 04:17:59,749] [pool-1-thread-3] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-09-30 04:18:26,836] [pool-1-thread-4] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-09-30 04:18:35,032] [pool-1-thread-3] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-09-30 04:18:43,615] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-09-30 04:19:03,395] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-09-30 04:19:10,975] [pool-1-thread-4] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-09-30 04:19:24,789] [pool-1-thread-2] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-09-30 04:19:32,114] [pool-1-thread-3] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-09-30 04:19:36,698] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-09-30 04:19:47,637] [pool-1-thread-3] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-09-30 04:19:57,911] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-09-30 04:19:59,361] [pool-1-thread-2] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] 04:46:21,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:46:21,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:46:21,833 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-09-30_04-46-21.log] [testng] 04:46:21,833 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d9e511c - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 78 minutes 16 seconds Finished: SUCCESS