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Started by upstream project "BIOFORMATS-test-repo" build number 206 originally caused by: Started by upstream project "Trigger" build number 232 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins2799933286533674009.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_32745_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 03:41:26,038 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:41:26,039 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 03:41:26,039 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:41:26,040 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:41:26,040 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:41:26,041 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:41:26,041 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:41:26,041 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:41:26,042 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:41:26,042 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:41:26,042 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:41:26,043 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:41:26,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:41:26,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:41:26,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:41:26,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:41:26,248 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:41:26,248 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:41:26,248 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:41:26,248 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:41:26,248 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 03:41:26,249 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 03:41:26,249 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 207 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-01 03:41:26,258] [main] java.version = 11.0.16 [testng] 03:41:26,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:41:26,261 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:41:26,301 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-01_03-41-26.log] [testng] 03:41:26,303 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-10-01 03:41:26,305] [main] testng.directory = /data [testng] [2024-10-01 03:41:26,305] [main] testng.configDirectory = /config [testng] [2024-10-01 03:41:26,314] [main] testng.multiplier = 1.0 [testng] [2024-10-01 03:41:26,316] [main] testng.in-memory = false [testng] [2024-10-01 03:41:26,316] [main] testng.allow-missing = false [testng] [2024-10-01 03:41:26,316] [main] user.language = en [testng] [2024-10-01 03:41:26,316] [main] user.country = ${user.country} [testng] [2024-10-01 03:41:26,316] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-01 03:42:12,122] [main] ---------------------------------------- [testng] [2024-10-01 03:42:12,122] [main] Total files: 15735 [testng] [2024-10-01 03:42:12,122] [main] Scan time: 45.806 s (2 ms/file) [testng] [2024-10-01 03:42:12,122] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-01 03:43:20,728] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] 03:43:20,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:43:20,729 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:20,731 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-01_03-43-20.log] [testng] 03:43:20,731 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66cd1508 - End of configuration. [testng] [2024-10-01 03:43:20,938] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] 03:43:20,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:43:20,938 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:20,939 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-01_03-43-20.log] [testng] 03:43:20,939 |-INFO in ch.qos.logback.core.sift.SiftProcessor@fb10551 - End of configuration. [testng] [2024-10-01 03:43:21,821] [pool-1-thread-11] Initializing /data/converted/stephan/notok2.tif: [testng] 03:43:21,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:43:21,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:21,822 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-01_03-43-21.log] [testng] 03:43:21,822 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5fe0bc6c - End of configuration. [testng] [2024-10-01 03:43:22,038] [pool-1-thread-10] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] 03:43:22,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:43:22,039 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:22,040 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-01_03-43-22.log] [testng] 03:43:22,040 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d7bf102 - End of configuration. [testng] [2024-10-01 03:43:22,280] [pool-1-thread-9] Initializing /data/converted/sebastien/F1.tif: [testng] 03:43:22,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:43:22,280 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:22,281 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-01_03-43-22.log] [testng] 03:43:22,281 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3bc817ec - End of configuration. [testng] [2024-10-01 03:43:22,556] [pool-1-thread-8] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] 03:43:22,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:43:22,556 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:22,557 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-01_03-43-22.log] [testng] 03:43:22,557 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bf8f086 - End of configuration. [testng] [2024-10-01 03:43:22,916] [pool-1-thread-7] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] 03:43:22,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:43:22,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:22,917 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-01_03-43-22.log] [testng] 03:43:22,917 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79b713f2 - End of configuration. [testng] [2024-10-01 03:43:23,502] [pool-1-thread-6] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] 03:43:23,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:43:23,503 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:23,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-01_03-43-23.log] [testng] 03:43:23,503 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e80ceff - End of configuration. [testng] [2024-10-01 03:43:23,722] [pool-1-thread-5] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] 03:43:23,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:43:23,722 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:23,723 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-01_03-43-23.log] [testng] 03:43:23,723 |-INFO in ch.qos.logback.core.sift.SiftProcessor@277d0f1b - End of configuration. [testng] [2024-10-01 03:43:24,194] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] 03:43:24,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:43:24,194 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:24,195 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-01_03-43-24.log] [testng] 03:43:24,195 |-INFO in ch.qos.logback.core.sift.SiftProcessor@602b60dd - End of configuration. [testng] [2024-10-01 03:43:24,470] [pool-1-thread-3] Initializing /data/converted/dietmar/137.tif: [testng] 03:43:24,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:43:24,471 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:24,471 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-01_03-43-24.log] [testng] 03:43:24,471 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b75ca30 - End of configuration. [testng] [2024-10-01 03:43:25,316] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] 03:43:25,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:43:25,317 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:43:25,317 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-01_03-43-25.log] [testng] 03:43:25,317 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d599ee - End of configuration. [testng] [2024-10-01 03:43:34,412] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-10-01 03:43:37,335] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-10-01 03:43:38,637] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-10-01 03:43:49,825] [pool-1-thread-2] Initializing /data/converted/converted/2chz.tif: [testng] [2024-10-01 03:43:50,459] [pool-1-thread-6] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-10-01 03:44:08,245] [pool-1-thread-6] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-10-01 03:44:19,203] [pool-1-thread-11] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-10-01 03:45:37,488] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-10-01 03:46:03,529] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-10-01 03:46:19,626] [pool-1-thread-9] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-10-01 03:46:32,343] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-10-01 03:46:37,169] [pool-1-thread-10] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-10-01 03:47:30,062] [pool-1-thread-8] Initializing /data/scott/Slide133-11.tif: [testng] [2024-10-01 03:47:54,865] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-10-01 03:48:43,949] [pool-1-thread-10] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-10-01 03:49:13,050] [pool-1-thread-10] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-10-01 03:49:27,636] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-10-01 03:49:41,469] [pool-1-thread-1] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-10-01 03:50:07,172] [pool-1-thread-10] Initializing /data/scott/Slide133-01.tif: [testng] [2024-10-01 03:50:33,938] [pool-1-thread-1] Initializing /data/converted/sebastien/test.tif: [testng] [2024-10-01 03:50:41,119] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-10-01 03:53:19,192] [pool-1-thread-4] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-10-01 03:55:56,922] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-10-01 03:58:14,664] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-10-01 03:58:46,720] [pool-1-thread-8] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-10-01 03:59:29,553] [pool-1-thread-8] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-10-01 03:59:55,842] [pool-1-thread-10] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-10-01 04:00:08,911] [pool-1-thread-5] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-10-01 04:00:12,578] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-10-01 04:00:16,561] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-10-01 04:00:33,933] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-10-01 04:00:36,898] [pool-1-thread-5] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-10-01 04:00:38,251] [pool-1-thread-1] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-10-01 04:00:39,391] [pool-1-thread-3] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-10-01 04:00:55,968] [pool-1-thread-12] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-10-01 04:01:15,134] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-10-01 04:01:18,715] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-10-01 04:01:55,803] [pool-1-thread-8] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-10-01 04:02:07,878] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-10-01 04:02:50,969] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-10-01 04:03:10,711] [pool-1-thread-8] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2024-10-01 04:03:27,826] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-10-01 04:03:29,221] [pool-1-thread-2] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-10-01 04:04:31,856] [pool-1-thread-1] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-10-01 04:05:58,869] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2024-10-01 04:07:30,240] [pool-1-thread-6] Initializing /data/converted/michel/d.tif: [testng] [2024-10-01 04:07:51,034] [pool-1-thread-6] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-10-01 04:07:59,765] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-10-01 04:08:27,902] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-10-01 04:08:35,741] [pool-1-thread-8] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-10-01 04:08:39,261] [pool-1-thread-10] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-10-01 04:08:53,010] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-10-01 04:08:56,806] [pool-1-thread-10] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-10-01 04:09:04,170] [pool-1-thread-4] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-10-01 04:11:00,319] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-10-01 04:11:36,682] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-10-01 04:11:39,781] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-10-01 04:12:29,724] [pool-1-thread-5] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-10-01 04:12:47,081] [pool-1-thread-5] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-10-01 04:13:04,557] [pool-1-thread-5] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-10-01 04:13:07,853] [pool-1-thread-7] Initializing /data/converted/michel/a.tif: [testng] [2024-10-01 04:13:22,476] [pool-1-thread-7] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-10-01 04:13:48,984] [pool-1-thread-5] Initializing /data/converted/michel/c.tif: [testng] [2024-10-01 04:13:58,023] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-10-01 04:14:07,563] [pool-1-thread-5] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-10-01 04:14:15,482] [pool-1-thread-8] Initializing /data/scott/Slide133-04.tif: [testng] [2024-10-01 04:14:32,146] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-10-01 04:15:20,354] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-10-01 04:16:02,107] [pool-1-thread-6] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-10-01 04:16:10,750] [pool-1-thread-5] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-10-01 04:16:18,426] [pool-1-thread-4] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-10-01 04:16:32,593] [pool-1-thread-5] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-10-01 04:16:37,861] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-10-01 04:16:56,978] [pool-1-thread-6] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-10-01 04:16:58,449] [pool-1-thread-5] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-10-01 04:17:37,755] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-10-01 04:17:53,703] [pool-1-thread-6] Initializing /data/converted/nicolas/image.tif: [testng] [2024-10-01 04:18:05,978] [pool-1-thread-4] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-10-01 04:18:13,421] [pool-1-thread-6] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-10-01 04:18:25,830] [pool-1-thread-4] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-10-01 04:20:49,433] [pool-1-thread-8] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-10-01 04:21:13,208] [pool-1-thread-8] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-10-01 04:21:14,844] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-10-01 04:21:42,745] [pool-1-thread-8] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-10-01 04:21:45,800] [pool-1-thread-9] Initializing /data/converted/converted/damian.tif: [testng] [2024-10-01 04:22:05,642] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-10-01 04:23:08,536] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-10-01 04:23:15,924] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-10-01 04:23:39,960] [pool-1-thread-5] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-10-01 04:23:46,555] [pool-1-thread-4] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-10-01 04:24:41,103] [pool-1-thread-10] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-10-01 04:25:09,797] [pool-1-thread-10] Initializing /data/converted/michel/e.tif: [testng] [2024-10-01 04:25:21,612] [pool-1-thread-12] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-10-01 04:25:44,455] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-10-01 04:25:52,270] [pool-1-thread-10] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-10-01 04:26:40,199] [pool-1-thread-4] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-10-01 04:26:50,743] [pool-1-thread-3] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-10-01 04:27:06,006] [pool-1-thread-3] Initializing /data/scott/Slide133-08.tif: [testng] [2024-10-01 04:27:24,896] [pool-1-thread-3] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-10-01 04:27:46,917] [pool-1-thread-9] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-10-01 04:27:48,201] [pool-1-thread-3] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-10-01 04:27:49,445] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-10-01 04:27:55,063] [pool-1-thread-9] Initializing /data/converted/michel/b.tif: [testng] [2024-10-01 04:28:21,834] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-10-01 04:28:58,593] [pool-1-thread-8] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-10-01 04:28:59,944] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-10-01 04:29:35,523] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-10-01 04:30:33,921] [pool-1-thread-3] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-10-01 04:30:39,674] [pool-1-thread-5] Initializing /data/converted/dietmar/138.tif: [testng] [2024-10-01 04:30:58,641] [pool-1-thread-12] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-10-01 04:31:14,505] [pool-1-thread-12] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-10-01 04:32:17,101] [pool-1-thread-10] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-10-01 04:33:27,188] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 04:52:13,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:52:13,765 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:52:13,766 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-01_04-52-13.log] [testng] 04:52:13,766 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3127e762 - End of configuration. [testng] 04:55:08,408 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:55:08,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:55:08,412 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-01_04-55-08.log] [testng] 04:55:08,412 |-INFO in ch.qos.logback.core.sift.SiftProcessor@603042a5 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 73 minutes 46 seconds Finished: SUCCESS