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Started by upstream project "BIOFORMATS-test-repo" build number 208 originally caused by: Started by upstream project "Trigger" build number 234 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins7849991362396917717.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_32986_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:44:07,439 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:44:07,441 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service. [testng] 01:44:07,441 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:44:07,442 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:44:07,442 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:44:07,443 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:44:07,443 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:44:07,443 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:44:07,443 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:44:07,444 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:44:07,444 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:44:07,445 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:44:07,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:44:07,624 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:44:07,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:44:07,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:44:07,655 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:44:07,655 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:44:07,655 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:44:07,656 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:44:07,656 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration. [testng] 01:44:07,656 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point [testng] 01:44:07,657 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 214 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-03 01:44:07,666] [main] java.version = 21 [testng] 01:44:07,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:44:07,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:44:07,710 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-03_01-44-07.log] [testng] 01:44:07,712 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration. [testng] [2024-10-03 01:44:07,713] [main] testng.directory = /data [testng] [2024-10-03 01:44:07,714] [main] testng.configDirectory = /config [testng] [2024-10-03 01:44:07,722] [main] testng.multiplier = 1.0 [testng] [2024-10-03 01:44:07,723] [main] testng.in-memory = false [testng] [2024-10-03 01:44:07,723] [main] testng.allow-missing = false [testng] [2024-10-03 01:44:07,723] [main] user.language = en [testng] [2024-10-03 01:44:07,723] [main] user.country = ${user.country} [testng] [2024-10-03 01:44:07,723] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-03 01:44:24,419] [main] ---------------------------------------- [testng] [2024-10-03 01:44:24,419] [main] Total files: 259 [testng] [2024-10-03 01:44:24,420] [main] Scan time: 16.696 s (64 ms/file) [testng] [2024-10-03 01:44:24,420] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-03 01:50:27,172] [pool-1-thread-1] Initializing /data/johannes/step2.bmp: [testng] 01:50:27,172 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:50:27,172 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:27,174 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-03_01-50-27.log] [testng] 01:50:27,174 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d2270e0 - End of configuration. [testng] [2024-10-03 01:50:27,227] [pool-1-thread-12] Initializing /data/brian/FLIP.oib: [testng] 01:50:27,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:50:27,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:27,228 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-03_01-50-27.log] [testng] 01:50:27,228 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a0f30e - End of configuration. [testng] [2024-10-03 01:50:27,669] [pool-1-thread-11] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] 01:50:27,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:50:27,670 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:27,670 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-03_01-50-27.log] [testng] 01:50:27,671 |-INFO in ch.qos.logback.core.sift.SiftProcessor@307e1263 - End of configuration. [testng] [2024-10-03 01:50:27,918] [pool-1-thread-10] Initializing /data/yoshihito/XY.oif: [testng] 01:50:27,918 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:50:27,919 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:27,919 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-03_01-50-27.log] [testng] 01:50:27,920 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78bee4bb - End of configuration. [testng] [2024-10-03 01:50:28,158] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oif: [testng] 01:50:28,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:50:28,159 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:28,159 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-03_01-50-28.log] [testng] 01:50:28,160 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cc9158d - End of configuration. [testng] [2024-10-03 01:50:28,464] [pool-1-thread-8] Initializing /data/johannes/Image0006/Image0006.oif: [testng] 01:50:28,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:50:28,465 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:28,465 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-03_01-50-28.log] [testng] 01:50:28,466 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33d3b67f - End of configuration. [testng] [2024-10-03 01:50:28,969] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] 01:50:28,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:50:28,969 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:28,970 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-03_01-50-28.log] [testng] 01:50:28,970 |-INFO in ch.qos.logback.core.sift.SiftProcessor@771c5da1 - End of configuration. [testng] [2024-10-03 01:50:29,330] [pool-1-thread-6] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] 01:50:29,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:50:29,330 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:29,331 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-03_01-50-29.log] [testng] 01:50:29,332 |-INFO in ch.qos.logback.core.sift.SiftProcessor@452991c3 - End of configuration. [testng] [2024-10-03 01:50:29,716] [pool-1-thread-5] Initializing /data/brian/PA-GFPv-2.oib: [testng] 01:50:29,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:50:29,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:29,717 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-03_01-50-29.log] [testng] 01:50:29,718 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7be77972 - End of configuration. [testng] [2024-10-03 01:50:30,155] [pool-1-thread-4] Initializing /data/qa-17748/Image0079.oib: [testng] 01:50:30,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:50:30,156 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:30,156 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-03_01-50-30.log] [testng] 01:50:30,157 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b977412 - End of configuration. [testng] [2024-10-03 01:50:30,413] [pool-1-thread-3] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 01:50:30,413 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:50:30,414 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:30,414 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-03_01-50-30.log] [testng] 01:50:30,415 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f8557d3 - End of configuration. [testng] [2024-10-03 01:50:30,852] [pool-1-thread-2] Initializing /data/brian/PA-GFP-3.oib: [testng] 01:50:30,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:50:30,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:50:30,853 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-03_01-50-30.log] [testng] 01:50:30,853 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21fd559 - End of configuration. [testng] [2024-10-03 01:50:33,840] [pool-1-thread-1] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-03 01:50:34,369] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-03 01:50:34,897] [pool-1-thread-11] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-03 01:50:35,215] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-03 01:50:36,390] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-10-03 01:50:36,891] [pool-1-thread-2] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-03 01:50:38,182] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-03 01:50:38,455] [pool-1-thread-3] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-10-03 01:50:39,060] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-03 01:50:41,136] [pool-1-thread-1] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-03 01:50:41,619] [pool-1-thread-11] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-03 01:50:42,104] [pool-1-thread-7] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-03 01:50:42,447] [pool-1-thread-5] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-03 01:50:42,659] [pool-1-thread-3] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-03 01:50:43,217] [pool-1-thread-6] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-03 01:50:47,012] [pool-1-thread-12] Initializing /data/david/Image0016.oif: [testng] [2024-10-03 01:50:47,889] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-03 01:50:48,739] [pool-1-thread-10] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-03 01:50:52,108] [pool-1-thread-11] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-03 01:50:53,201] [pool-1-thread-3] Initializing /data/michael/CELL3.oib: [testng] [2024-10-03 01:50:54,368] [pool-1-thread-2] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-03 01:50:54,583] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-03 01:50:55,735] [pool-1-thread-3] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-03 01:50:58,786] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-03 01:50:59,618] [pool-1-thread-11] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-03 01:51:01,666] [pool-1-thread-2] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-03 01:51:02,167] [pool-1-thread-9] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-03 01:51:03,048] [pool-1-thread-7] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-10-03 01:51:04,008] [pool-1-thread-1] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-03 01:51:05,241] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-03 01:51:05,364] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-10-03 01:51:06,169] [pool-1-thread-6] Initializing /data/monica/Image0056.oif: [testng] [2024-10-03 01:51:06,644] [pool-1-thread-2] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-03 01:51:07,356] [pool-1-thread-5] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-03 01:51:08,560] [pool-1-thread-1] Initializing /data/glen/Image0002.oif: [testng] [2024-10-03 01:51:11,994] [pool-1-thread-9] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-03 01:51:50,088] [pool-1-thread-5] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-03 01:51:51,638] [pool-1-thread-5] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-03 01:51:52,832] [pool-1-thread-12] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-10-03 01:51:54,165] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-03 01:51:55,732] [pool-1-thread-5] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-03 01:51:56,379] [pool-1-thread-12] Initializing /data/simon/never_worked.oib: [testng] [2024-10-03 01:51:57,774] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-10-03 01:51:59,069] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-03 01:51:59,803] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-10-03 01:52:06,589] [pool-1-thread-12] Initializing /data/molly/11OCT4.OIF: [testng] [2024-10-03 01:52:14,198] [pool-1-thread-7] Initializing /data/glen/simulstack.oib: [testng] [2024-10-03 01:52:15,885] [pool-1-thread-6] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-03 01:52:16,270] [pool-1-thread-2] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-03 01:52:26,877] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-03 01:52:28,925] [pool-1-thread-6] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-03 01:52:39,009] [pool-1-thread-6] Initializing /data/pedro/plv-test.oib: [testng] [2024-10-03 01:52:40,906] [pool-1-thread-7] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-03 01:52:44,159] [pool-1-thread-6] Initializing /data/david/Image0016.oib: [testng] [2024-10-03 01:52:44,596] [pool-1-thread-7] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-03 01:52:47,810] [pool-1-thread-6] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-03 01:52:48,783] [pool-1-thread-6] Initializing /data/karl/Image0009.oib: [testng] [2024-10-03 01:52:50,358] [pool-1-thread-7] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-03 01:53:30,428] [pool-1-thread-6] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-03 01:53:33,576] [pool-1-thread-6] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-03 01:54:25,288] [pool-1-thread-5] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-03 01:58:13,092] [pool-1-thread-5] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-03 01:58:17,783] [pool-1-thread-5] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-03 01:58:22,320] [pool-1-thread-5] Initializing /data/molly/11OCT5.OIF: [testng] [2024-10-03 01:58:51,590] [pool-1-thread-4] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-03 01:58:57,408] [pool-1-thread-4] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-03 01:59:23,298] [pool-1-thread-4] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-10-03 02:02:22,031] [pool-1-thread-11] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-03 02:02:25,163] [pool-1-thread-11] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-03 02:02:31,503] [pool-1-thread-11] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-03 02:02:38,216] [pool-1-thread-11] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-03 02:02:42,292] [pool-1-thread-11] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-03 02:02:49,795] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-03 02:02:54,004] [pool-1-thread-11] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-03 02:02:57,861] [pool-1-thread-11] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-03 02:03:03,134] [pool-1-thread-11] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-03 02:03:08,243] [pool-1-thread-11] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-03 02:05:00,342] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-03 02:05:03,714] [pool-1-thread-1] Initializing /data/sten/01.oib: [testng] [2024-10-03 02:05:06,519] [pool-1-thread-1] Initializing /data/aryeh/1h.oib: [testng] [2024-10-03 02:05:14,125] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-10-03 02:05:18,995] [pool-1-thread-1] Initializing /data/christian/20min.oif: [testng] [2024-10-03 02:05:35,444] [pool-1-thread-1] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-03 02:05:40,799] [pool-1-thread-1] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-03 02:05:44,860] [pool-1-thread-1] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-10-03 02:05:49,007] [pool-1-thread-1] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-10-03 02:05:53,554] [pool-1-thread-1] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-03 02:06:20,527] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-03 02:06:26,793] [pool-1-thread-6] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-03 02:06:53,368] [pool-1-thread-1] Initializing /data/molly/11OCT2.OIF: [testng] [2024-10-03 02:08:36,140] [pool-1-thread-4] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-03 02:09:15,885] [pool-1-thread-12] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-10-03 02:09:56,791] [pool-1-thread-12] Initializing /data/glen/111407.oif: [testng] [2024-10-03 02:11:08,898] [pool-1-thread-3] Initializing /data/marc/V0606J.oib: [testng] [2024-10-03 02:11:13,092] [pool-1-thread-10] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-03 02:11:15,967] [pool-1-thread-10] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-10-03 02:11:27,131] [pool-1-thread-3] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-03 02:11:36,021] [pool-1-thread-2] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-03 02:11:39,593] [pool-1-thread-10] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-03 02:13:32,773] [pool-1-thread-2] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-10-03 02:13:37,275] [pool-1-thread-2] Initializing /data/johannes/step1.bmp: [testng] [2024-10-03 02:13:39,940] [pool-1-thread-2] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-03 02:13:44,160] [pool-1-thread-2] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-10-03 02:14:06,516] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-03 02:14:11,144] [pool-1-thread-2] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-10-03 02:14:12,176] [pool-1-thread-3] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-03 02:14:15,766] [pool-1-thread-2] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-03 02:14:28,809] [pool-1-thread-3] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-03 02:14:48,830] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-03 02:14:53,912] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-03 02:14:59,016] [pool-1-thread-5] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-03 02:15:56,910] [pool-1-thread-8] Initializing /data/johannes/step4.bmp: [testng] [2024-10-03 02:15:58,831] [pool-1-thread-8] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-03 02:16:03,583] [pool-1-thread-8] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-03 02:21:38,493] [pool-1-thread-12] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-03 02:21:45,996] [pool-1-thread-12] Initializing /data/marc/V0606L.oib: [testng] [2024-10-03 02:21:50,946] [pool-1-thread-3] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-03 02:22:24,849] [pool-1-thread-12] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-03 02:22:32,652] [pool-1-thread-12] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-03 02:22:40,218] [pool-1-thread-12] Initializing /data/johannes/step3.bmp: [testng] [2024-10-03 02:22:43,727] [pool-1-thread-12] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-03 02:22:52,385] [pool-1-thread-12] Initializing /data/glen/simulstack.oif: [testng] [2024-10-03 02:24:59,075] [pool-1-thread-8] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-03 02:25:06,545] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-10-03 02:25:14,482] [pool-1-thread-8] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-03 02:28:19,665] [pool-1-thread-6] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-03 02:28:23,950] [pool-1-thread-6] Initializing /data/allan/62909#1.oib: [testng] [2024-10-03 02:28:27,793] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-03 02:28:33,846] [pool-1-thread-6] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-03 02:28:47,027] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-03 02:29:05,279] [pool-1-thread-6] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-03 02:29:09,356] [pool-1-thread-6] Initializing /data/jae/Image0001.oib: [testng] 03:13:48,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:13:48,534 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:13:48,535 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-03_03-13-48.log] [testng] 03:13:48,536 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60e6c439 - End of configuration. [testng] 03:26:15,389 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:26:15,389 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:26:15,390 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-03_03-26-15.log] [testng] 03:26:15,390 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c7eb2a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 102 minutes 11 seconds Finished: SUCCESS