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Started by upstream project "BIOFORMATS-test-repo" build number 208
originally caused by:
 Started by upstream project "Trigger" build number 234
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins17727553606628283623.sh
+ '[' cri = slidebook ']'
++ date +%u
+ '[' 4 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_33038_merge_ci -v /uod/idr/repos/curated/cri:/data -v /uod/idr-scratch/merge-ci/curated/cri:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] warning: [options] source value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] target value 8 is obsolete and will be removed in a future release
    [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options.
    [javac] 4 warnings

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 03:27:28,660 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 03:27:28,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - No custom configurators were discovered as a service.
   [testng] 03:27:28,661 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:27:28,662 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:27:28,662 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 03:27:28,663 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 03:27:28,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 03:27:28,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:27:28,663 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:27:28,664 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 03:27:28,664 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 03:27:28,664 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 03:27:28,811 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 03:27:28,812 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 03:27:28,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 03:27:28,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 03:27:28,840 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 03:27:28,840 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 03:27:28,840 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 03:27:28,841 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 03:27:28,841 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@d9345cd - End of configuration.
   [testng] 03:27:28,842 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@48aca48b - Registering current configuration as safe fallback point
   [testng] 03:27:28,842 |-INFO in ch.qos.logback.classic.util.ContextInitializer@46fa7c39 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 179 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-10-03 03:27:28,850] [main] java.version = 21
   [testng] 03:27:28,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 03:27:28,852 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:27:28,890 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-03_03-27-28.log]
   [testng] 03:27:28,892 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71687585 - End of configuration.
   [testng] [2024-10-03 03:27:28,893] [main] testng.directory = /data
   [testng] [2024-10-03 03:27:28,893] [main] testng.configDirectory = /config
   [testng] [2024-10-03 03:27:28,901] [main] testng.multiplier = 1.0
   [testng] [2024-10-03 03:27:28,902] [main] testng.in-memory = false
   [testng] [2024-10-03 03:27:28,902] [main] testng.allow-missing = false
   [testng] [2024-10-03 03:27:28,902] [main] user.language = en
   [testng] [2024-10-03 03:27:28,902] [main] user.country = ${user.country}
   [testng] [2024-10-03 03:27:28,902] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-10-03 03:27:29,917] [main] ----------------------------------------
   [testng] [2024-10-03 03:27:29,917] [main] Total files: 96
   [testng] [2024-10-03 03:27:29,917] [main] Scan time: 1.015 s (10 ms/file)
   [testng] [2024-10-03 03:27:29,918] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 96 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-10-03 03:29:24,833] [pool-1-thread-1] Initializing /data/thomas/B3 DAPI Metadata.bmp: 
   [testng] 03:29:24,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 03:29:24,834 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:24,835 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-03_03-29-24.log]
   [testng] 03:29:24,836 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ba5f79e - End of configuration.
   [testng] [2024-10-03 03:29:24,959] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 DAPI_680.tif: 
   [testng] 03:29:24,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 03:29:24,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:24,966 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-03_03-29-24.log]
   [testng] 03:29:24,967 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fb7e7d - End of configuration.
   [testng] [2024-10-03 03:29:26,142] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_780.tif: 
   [testng] 03:29:26,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 03:29:26,142 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:26,143 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-03_03-29-26.log]
   [testng] 03:29:26,144 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ddaeed5 - End of configuration.
   [testng] [2024-10-03 03:29:27,291] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_910.tif: 
   [testng] 03:29:27,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 03:29:27,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:27,291 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-03_03-29-27.log]
   [testng] 03:29:27,292 |-INFO in ch.qos.logback.core.sift.SiftProcessor@18d95773 - End of configuration.
   [testng] [2024-10-03 03:29:28,469] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_690.tif: 
   [testng] 03:29:28,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 03:29:28,469 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:28,470 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-03_03-29-28.log]
   [testng] 03:29:28,470 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6254bb7 - End of configuration.
   [testng] [2024-10-03 03:29:29,653] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_730.tif: 
   [testng] 03:29:29,654 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 03:29:29,654 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:29,654 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-03_03-29-29.log]
   [testng] 03:29:29,655 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52712091 - End of configuration.
   [testng] [2024-10-03 03:29:30,807] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_640.tif: 
   [testng] 03:29:30,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 03:29:30,807 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:30,808 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-03_03-29-30.log]
   [testng] 03:29:30,808 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1dffaa71 - End of configuration.
   [testng] [2024-10-03 03:29:32,004] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_620.tif: 
   [testng] 03:29:32,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 03:29:32,005 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:32,005 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-03_03-29-32.log]
   [testng] 03:29:32,006 |-INFO in ch.qos.logback.core.sift.SiftProcessor@51678a7 - End of configuration.
   [testng] [2024-10-03 03:29:33,172] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_540.tif: 
   [testng] 03:29:33,172 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 03:29:33,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:33,174 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-03_03-29-33.log]
   [testng] 03:29:33,174 |-INFO in ch.qos.logback.core.sift.SiftProcessor@778fe85d - End of configuration.
   [testng] [2024-10-03 03:29:34,349] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_820.tif: 
   [testng] 03:29:34,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 03:29:34,349 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:34,350 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-03_03-29-34.log]
   [testng] 03:29:34,350 |-INFO in ch.qos.logback.core.sift.SiftProcessor@322e28f9 - End of configuration.
   [testng] [2024-10-03 03:29:35,522] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_610.tif: 
   [testng] 03:29:35,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 03:29:35,522 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:35,523 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-03_03-29-35.log]
   [testng] 03:29:35,524 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e6a99be - End of configuration.
   [testng] [2024-10-03 03:29:36,708] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_530.tif: 
   [testng] 03:29:36,708 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 03:29:36,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:29:36,709 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-03_03-29-36.log]
   [testng] 03:29:36,709 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b058591 - End of configuration.
   [testng] [2024-10-03 03:29:40,550] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_500.tif: 
   [testng] [2024-10-03 03:29:47,417] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_750.tif: 
   [testng] [2024-10-03 03:29:48,546] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_940.tif: 
   [testng] [2024-10-03 03:29:49,741] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 DAPI_840.tif: 
   [testng] [2024-10-03 03:29:50,881] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_820.tif: 
   [testng] [2024-10-03 03:29:51,990] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_940.tif: 
   [testng] [2024-10-03 03:29:53,186] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_900.tif: 
   [testng] [2024-10-03 03:29:54,366] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_740.tif: 
   [testng] [2024-10-03 03:29:55,562] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_880.tif: 
   [testng] [2024-10-03 03:29:56,719] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_620.tif: 
   [testng] [2024-10-03 03:29:57,907] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_920.tif: 
   [testng] [2024-10-03 03:29:59,089] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_860.tif: 
   [testng] [2024-10-03 03:30:01,257] [pool-1-thread-1] Initializing /data/thomas/B3 FITC Metadata.bmp: 
   [testng] [2024-10-03 03:30:03,312] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_510.tif: 
   [testng] [2024-10-03 03:30:08,720] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_580.tif: 
   [testng] [2024-10-03 03:30:09,896] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_570.tif: 
   [testng] [2024-10-03 03:30:11,039] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_750.tif: 
   [testng] [2024-10-03 03:30:12,123] [pool-1-thread-9] Initializing /data/thomas/B3 FITC.im3: 
   [testng] [2024-10-03 03:30:12,511] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_740.tif: 
   [testng] [2024-10-03 03:30:13,647] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_560.tif: 
   [testng] [2024-10-03 03:30:14,770] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_770.tif: 
   [testng] [2024-10-03 03:30:15,819] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_730.tif: 
   [testng] [2024-10-03 03:30:16,892] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_830.tif: 
   [testng] [2024-10-03 03:30:17,979] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_790.tif: 
   [testng] [2024-10-03 03:30:19,053] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_900.tif: 
   [testng] [2024-10-03 03:30:24,149] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_810.tif: 
   [testng] [2024-10-03 03:30:29,250] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_590.tif: 
   [testng] [2024-10-03 03:30:30,643] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_870.tif: 
   [testng] [2024-10-03 03:30:31,761] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_520.tif: 
   [testng] [2024-10-03 03:30:32,889] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_700.tif: 
   [testng] [2024-10-03 03:30:33,997] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_690.tif: 
   [testng] [2024-10-03 03:30:35,089] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_860.tif: 
   [testng] [2024-10-03 03:30:36,198] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_950.tif: 
   [testng] [2024-10-03 03:30:37,263] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_550.tif: 
   [testng] [2024-10-03 03:30:38,368] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_720.tif: 
   [testng] [2024-10-03 03:30:39,471] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_770.tif: 
   [testng] [2024-10-03 03:30:40,574] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_600.tif: 
   [testng] [2024-10-03 03:30:45,542] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_650.tif: 
   [testng] [2024-10-03 03:30:48,622] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_760.tif: 
   [testng] [2024-10-03 03:30:51,724] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_870.tif: 
   [testng] [2024-10-03 03:30:52,830] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_850.tif: 
   [testng] [2024-10-03 03:30:53,911] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_760.tif: 
   [testng] [2024-10-03 03:30:54,980] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 FITC_710.tif: 
   [testng] [2024-10-03 03:30:56,104] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_630.tif: 
   [testng] [2024-10-03 03:30:57,246] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_720.tif: 
   [testng] [2024-10-03 03:30:58,377] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_600.tif: 
   [testng] [2024-10-03 03:30:59,466] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 DAPI_590.tif: 
   [testng] [2024-10-03 03:31:00,555] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 DAPI_570.tif: 
   [testng] [2024-10-03 03:31:01,595] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_920.tif: 
   [testng] [2024-10-03 03:31:06,560] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 DAPI_560.tif: 
   [testng] [2024-10-03 03:31:09,566] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_710.tif: 
   [testng] [2024-10-03 03:31:12,646] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_880.tif: 
   [testng] [2024-10-03 03:31:13,729] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 FITC_580.tif: 
   [testng] [2024-10-03 03:31:14,825] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_640.tif: 
   [testng] [2024-10-03 03:31:15,928] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_550.tif: 
   [testng] [2024-10-03 03:31:17,428] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_510.tif: 
   [testng] [2024-10-03 03:31:18,517] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_950.tif: 
   [testng] [2024-10-03 03:31:19,609] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 FITC_630.tif: 
   [testng] [2024-10-03 03:31:20,757] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 DAPI_800.tif: 
   [testng] [2024-10-03 03:31:21,944] [pool-1-thread-6] Initializing /data/thomas/B3 DAPI.im3: 
   [testng] [2024-10-03 03:31:22,326] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_890.tif: 
   [testng] [2024-10-03 03:31:27,365] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_830.tif: 
   [testng] [2024-10-03 03:31:30,465] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 FITC_890.tif: 
   [testng] [2024-10-03 03:31:32,393] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 FITC_930.tif: 
   [testng] [2024-10-03 03:31:34,766] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_670.tif: 
   [testng] [2024-10-03 03:31:36,222] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 FITC_810.tif: 
   [testng] [2024-10-03 03:31:37,391] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 DAPI_530.tif: 
   [testng] [2024-10-03 03:31:38,476] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_660.tif: 
   [testng] [2024-10-03 03:31:39,641] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 FITC_670.tif: 
   [testng] [2024-10-03 03:31:40,783] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 DAPI_930.tif: 
   [testng] [2024-10-03 03:31:41,882] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_910.tif: 
   [testng] [2024-10-03 03:31:43,102] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_660.tif: 
   [testng] [2024-10-03 03:31:44,180] [pool-1-thread-4] Initializing /data/thomas/TIFFs/B3 FITC_840.tif: 
   [testng] [2024-10-03 03:31:49,389] [pool-1-thread-1] Initializing /data/thomas/TIFFs/B3 FITC_700.tif: 
   [testng] [2024-10-03 03:31:50,511] [pool-1-thread-9] Initializing /data/thomas/TIFFs/B3 DAPI_520.tif: 
   [testng] [2024-10-03 03:31:52,614] [pool-1-thread-6] Initializing /data/thomas/TIFFs/B3 DAPI_540.tif: 
   [testng] [2024-10-03 03:31:55,710] [pool-1-thread-10] Initializing /data/thomas/TIFFs/B3 DAPI_650.tif: 
   [testng] [2024-10-03 03:31:57,029] [pool-1-thread-3] Initializing /data/thomas/TIFFs/B3 FITC_800.tif: 
   [testng] [2024-10-03 03:31:58,189] [pool-1-thread-7] Initializing /data/thomas/TIFFs/B3 FITC_780.tif: 
   [testng] [2024-10-03 03:31:59,194] [pool-1-thread-8] Initializing /data/thomas/TIFFs/B3 DAPI_790.tif: 
   [testng] [2024-10-03 03:32:00,225] [pool-1-thread-11] Initializing /data/thomas/TIFFs/B3 FITC_680.tif: 
   [testng] [2024-10-03 03:32:01,322] [pool-1-thread-5] Initializing /data/thomas/TIFFs/B3 DAPI_850.tif: 
   [testng] [2024-10-03 03:32:02,334] [pool-1-thread-12] Initializing /data/thomas/TIFFs/B3 DAPI_610.tif: 
   [testng] [2024-10-03 03:32:03,297] [pool-1-thread-2] Initializing /data/thomas/TIFFs/B3 DAPI_500.tif: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 5088, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 4 minutes 45 seconds
Finished: SUCCESS