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Started by upstream project "BIOFORMATS-test-repo" build number 209 originally caused by: Started by upstream project "Trigger" build number 235 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins4470843549634489832.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_33120_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:22:43,941 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:22:43,943 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 01:22:43,943 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:43,944 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:22:43,945 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:22:43,945 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:22:43,945 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:22:43,945 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:43,946 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:22:43,946 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:22:43,946 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:22:43,946 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:22:44,213 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:22:44,214 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:22:44,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:22:44,243 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:22:44,251 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:22:44,252 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:22:44,252 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:22:44,252 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:22:44,252 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 01:22:44,253 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 01:22:44,253 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 307 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-04 01:22:44,266] [main] java.version = 1.8.0_342 [testng] 01:22:44,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:22:44,270 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:22:44,334 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-04_01-22-44.log] [testng] 01:22:44,336 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-10-04 01:22:44,339] [main] testng.directory = /data [testng] [2024-10-04 01:22:44,339] [main] testng.configDirectory = /config [testng] [2024-10-04 01:22:44,358] [main] testng.multiplier = 1.0 [testng] [2024-10-04 01:22:44,358] [main] testng.in-memory = false [testng] [2024-10-04 01:22:44,358] [main] testng.allow-missing = false [testng] [2024-10-04 01:22:44,358] [main] user.language = en [testng] [2024-10-04 01:22:44,358] [main] user.country = ${user.country} [testng] [2024-10-04 01:22:44,358] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-04 01:23:19,982] [main] ---------------------------------------- [testng] [2024-10-04 01:23:19,982] [main] Total files: 4426 [testng] [2024-10-04 01:23:19,982] [main] Scan time: 35.623 s (8 ms/file) [testng] [2024-10-04 01:23:19,983] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-04 01:32:02,767] [pool-1-thread-1] Initializing /data/lzw/DendriteForks.tif: [testng] 01:32:02,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:32:02,768 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:02,770 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-04_01-32-02.log] [testng] 01:32:02,770 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7728afe2 - End of configuration. [testng] [2024-10-04 01:32:03,306] [pool-1-thread-12] Initializing /data/damian/27m.tiff: [testng] 01:32:03,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:32:03,306 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:03,307 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-04_01-32-03.log] [testng] 01:32:03,307 |-INFO in ch.qos.logback.core.sift.SiftProcessor@57093e1e - End of configuration. [testng] [2024-10-04 01:32:04,236] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z007.tif: [testng] 01:32:04,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:32:04,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:04,238 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-04_01-32-04.log] [testng] 01:32:04,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2845e923 - End of configuration. [testng] [2024-10-04 01:32:04,941] [pool-1-thread-10] Initializing /data/samples/cielab/Ski_TC8-03_sRGB.tif: [testng] 01:32:04,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:32:04,941 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:04,942 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-04_01-32-04.log] [testng] 01:32:04,942 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9c2a238 - End of configuration. [testng] [2024-10-04 01:32:05,768] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z009.tif: [testng] 01:32:05,769 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:32:05,769 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:05,769 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-04_01-32-05.log] [testng] 01:32:05,770 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43e3c561 - End of configuration. [testng] [2024-10-04 01:32:06,877] [pool-1-thread-8] Initializing /data/public/libtiff/jim___gg.tif: [testng] 01:32:06,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:32:06,877 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:06,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-04_01-32-06.log] [testng] 01:32:06,878 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3da6a373 - End of configuration. [testng] [2024-10-04 01:32:07,420] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] 01:32:07,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:32:07,420 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:07,421 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-04_01-32-07.log] [testng] 01:32:07,421 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44434458 - End of configuration. [testng] [2024-10-04 01:32:07,964] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z037.tif: [testng] 01:32:07,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:32:07,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:07,965 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-04_01-32-07.log] [testng] 01:32:07,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5dce7b53 - End of configuration. [testng] [2024-10-04 01:32:08,651] [pool-1-thread-5] Initializing /data/josiah/cell-Z28.C0.tiff: [testng] 01:32:08,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:32:08,651 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:08,652 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-04_01-32-08.log] [testng] 01:32:08,652 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e337421 - End of configuration. [testng] [2024-10-04 01:32:09,392] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z016.tif: [testng] 01:32:09,392 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:32:09,393 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:09,393 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-04_01-32-09.log] [testng] 01:32:09,394 |-INFO in ch.qos.logback.core.sift.SiftProcessor@23ca4020 - End of configuration. [testng] [2024-10-04 01:32:10,130] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] 01:32:10,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:32:10,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:10,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-04_01-32-10.log] [testng] 01:32:10,131 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52b1f564 - End of configuration. [testng] [2024-10-04 01:32:10,961] [pool-1-thread-2] Initializing /data/samples/melissa/imagej-last-ifd/Rat_Hippocampal_Neuron.tif: [testng] 01:32:10,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:32:10,961 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:32:10,962 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-04_01-32-10.log] [testng] 01:32:10,962 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7680ed90 - End of configuration. [testng] [2024-10-04 01:32:17,985] [pool-1-thread-8] Initializing /data/josiah/cell-Z21.C1.tiff: [testng] [2024-10-04 01:32:18,577] [pool-1-thread-4] Initializing /data/brian/MFGTMP_080902150001t001B02f73d2.TIF: [testng] [2024-10-04 01:32:19,137] [pool-1-thread-3] Initializing /data/josiah/cell-Z11.C0.tiff: [testng] [2024-10-04 01:32:19,586] [pool-1-thread-7] Initializing /data/brian/retina/retina_C1_Z039.tif: [testng] [2024-10-04 01:32:20,078] [pool-1-thread-11] Initializing /data/alexa/test4.tif: [testng] [2024-10-04 01:32:20,542] [pool-1-thread-12] Initializing /data/josh/NESb_C2_TP5.tiff: [testng] [2024-10-04 01:32:21,000] [pool-1-thread-6] Initializing /data/josiah/cell-Z7.C1.tiff: [testng] [2024-10-04 01:32:21,497] [pool-1-thread-9] Initializing /data/damian/15m.tiff: [testng] [2024-10-04 01:32:21,967] [pool-1-thread-5] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-05.tiff: [testng] [2024-10-04 01:32:22,362] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-10-04 01:32:23,294] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C0_Z005.tif: [testng] [2024-10-04 01:32:27,119] [pool-1-thread-11] Initializing /data/misc/mri-stack.tif: [testng] [2024-10-04 01:32:27,880] [pool-1-thread-2] Initializing /data/ascb/14312-p125A colocalization.tif: [testng] [2024-10-04 01:32:28,462] [pool-1-thread-6] Initializing /data/josh/3Aa_C2_TP1.tiff: [testng] [2024-10-04 01:32:28,893] [pool-1-thread-10] Initializing /data/stephane/F3L1A_DNA 2.tif: [testng] [2024-10-04 01:32:29,399] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z008.tif: [testng] [2024-10-04 01:32:29,805] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z021.tif: [testng] [2024-10-04 01:32:30,413] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-10-04 01:32:30,876] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-10-04 01:32:31,331] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-10-04 01:32:31,898] [pool-1-thread-7] Initializing /data/ascb/CYT-146_Fader_Distribution.tif: [testng] [2024-10-04 01:32:32,428] [pool-1-thread-12] Initializing /data/samples/melissa/16-signed-lzw-differenced.tiff: [testng] [2024-10-04 01:32:32,917] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z001.tif: [testng] [2024-10-04 01:32:36,862] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z022.tif: [testng] [2024-10-04 01:32:38,321] [pool-1-thread-9] Initializing /data/josiah/cell-Z35.C0.tiff: [testng] [2024-10-04 01:32:39,016] [pool-1-thread-3] Initializing /data/josh/NESb_C2_TP2.tiff: [testng] [2024-10-04 01:32:39,935] [pool-1-thread-5] Initializing /data/public/condensation/A5.pattern4.tif: [testng] [2024-10-04 01:32:40,674] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0202.TIF: [testng] [2024-10-04 01:32:41,198] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z020.tif: [testng] [2024-10-04 01:32:41,833] [pool-1-thread-6] Initializing /data/public/libtiff/jim___cg.tif: [testng] [2024-10-04 01:32:42,621] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z012.tif: [testng] [2024-10-04 01:32:43,312] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0253.TIF: [testng] [2024-10-04 01:32:43,921] [pool-1-thread-12] Initializing /data/wayne/mBoeglin_lzw/mm7.1.2.0_07.tif: [testng] [2024-10-04 01:32:44,347] [pool-1-thread-10] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-10-04 01:32:48,030] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z009.tif: [testng] [2024-10-04 01:32:48,725] [pool-1-thread-12] Initializing /data/josiah/cell-Z31.C1.tiff: [testng] [2024-10-04 01:32:50,444] [pool-1-thread-10] Initializing /data/wayne/Rockies-rgb.tif: [testng] [2024-10-04 01:32:51,115] [pool-1-thread-9] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x48.tiff: [testng] [2024-10-04 01:32:51,837] [pool-1-thread-6] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] [2024-10-04 01:32:52,594] [pool-1-thread-8] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-10-04 01:32:53,416] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z053.tif: [testng] [2024-10-04 01:32:54,284] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-10-04 01:32:55,098] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z019.tif: [testng] [2024-10-04 01:32:55,868] [pool-1-thread-1] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-10-04 01:32:56,543] [pool-1-thread-3] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-10-04 01:33:00,173] [pool-1-thread-11] Initializing 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[testng] [2024-10-04 01:39:05,795] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-10-04 01:39:05,995] [pool-1-thread-6] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-10-04 01:39:06,199] [pool-1-thread-9] Initializing /data/josiah/cell-Z2.C1.tiff: [testng] [2024-10-04 01:39:06,978] [pool-1-thread-8] Initializing /data/stephane/P014.tif: [testng] [2024-10-04 01:39:07,238] [pool-1-thread-2] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-10-04 01:39:07,477] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z042.tif: [testng] [2024-10-04 01:39:07,713] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-10-04 01:39:07,860] [pool-1-thread-5] Initializing /data/glen/6307wmmidb4237m_cmle.tif: [testng] [2024-10-04 01:39:08,742] [pool-1-thread-3] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x16.tiff: [testng] [2024-10-04 01:39:08,880] [pool-1-thread-6] Initializing /data/ascb/CYT-93_PasolliMouse1c_4800.tif: [testng] [2024-10-04 01:39:09,059] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0240.TIF: [testng] [2024-10-04 01:39:09,191] [pool-1-thread-8] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-10-04 01:39:09,756] [pool-1-thread-1] Initializing /data/public/libtiff/jello.tif: [testng] [2024-10-04 01:39:10,558] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0229.TIF: [testng] [2024-10-04 01:39:10,773] [pool-1-thread-7] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-10-04 01:39:11,003] [pool-1-thread-12] Initializing /data/josiah/cell-Z34.C0.tiff: [testng] [2024-10-04 01:39:11,264] [pool-1-thread-5] Initializing /data/josiah/cell-Z9.C1.tiff: [testng] [2024-10-04 01:39:11,575] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0234.TIF: [testng] [2024-10-04 01:39:11,865] [pool-1-thread-2] Initializing /data/carolyn/tumor_3.tif: [testng] [2024-10-04 01:39:12,727] 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[2024-10-04 01:39:30,110] [pool-1-thread-11] Initializing /data/david/200umbeads_stack_1fs.tif: [testng] [2024-10-04 01:39:30,308] [pool-1-thread-3] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs016.TIF: [testng] [2024-10-04 01:39:30,511] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-48x16.tiff: [testng] [2024-10-04 01:39:30,655] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C1_Z030.tif: [testng] [2024-10-04 01:39:30,740] [pool-1-thread-12] Initializing /data/josiah/cell-Z8.C1.tiff: [testng] [2024-10-04 01:39:30,829] [pool-1-thread-9] Initializing /data/ascb/CYT-29_BaintonGlycogenAB_4800.tif: [testng] [2024-10-04 01:39:33,285] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-10-04 01:39:34,001] [pool-1-thread-11] Initializing /data/josiah/cell-Z8.C0.tiff: [testng] [2024-10-04 01:39:34,210] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z021.tif: [testng] [2024-10-04 01:39:34,580] [pool-1-thread-4] Initializing /data/ascb/CYT-151_Raben_Noncontractile.tif: [testng] [2024-10-04 01:39:34,751] [pool-1-thread-10] Initializing /data/curtis/test1.tiff: [testng] [2024-10-04 01:39:34,849] [pool-1-thread-3] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-10-04 01:39:35,107] [pool-1-thread-2] Initializing /data/jae/25Jan10_MDCK_2R_3Dstack_60x_1.tif: [testng] [2024-10-04 01:39:35,837] [pool-1-thread-5] Initializing /data/misc/mri-new.mov: [testng] [2024-10-04 01:39:36,179] [pool-1-thread-7] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-10-04 01:39:36,838] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z050.tif: [testng] [2024-10-04 01:39:36,963] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z010.tif: [testng] [2024-10-04 01:39:37,062] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-10-04 01:39:37,253] [pool-1-thread-5] Initializing /data/josh/NESb_C2_TP7.tiff: [testng] [2024-10-04 01:39:38,825] [pool-1-thread-7] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-10-04 01:39:39,742] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C0_Z008.tif: [testng] [2024-10-04 01:39:39,883] [pool-1-thread-12] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-10-04 01:39:40,016] [pool-1-thread-10] Initializing /data/tamjid/10_para-stage 1.tiff: [testng] [2024-10-04 01:39:40,178] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-10-04 01:39:40,467] [pool-1-thread-2] Initializing /data/damian/36m.tiff: [testng] [2024-10-04 01:39:40,785] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-10-04 01:39:40,953] [pool-1-thread-5] Initializing /data/imagesc-82872/WT_Uninfected_top_right.tiff: [testng] [2024-10-04 01:39:42,548] [pool-1-thread-6] Initializing /data/josiah/cell-Z25.C0.tiff: [testng] [2024-10-04 01:39:42,699] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-10-04 01:39:42,886] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z000.tif: [testng] [2024-10-04 01:39:42,999] [pool-1-thread-10] Initializing /data/misc/mri.eps: [testng] [2024-10-04 01:39:43,021] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0242.TIF: [testng] [2024-10-04 01:39:43,389] [pool-1-thread-12] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-10-04 01:39:43,923] [pool-1-thread-10] Initializing /data/jae/first image.tif: [testng] [2024-10-04 01:39:44,289] [pool-1-thread-6] Initializing /data/samples/melissa/strike-uncompressed.tiff: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 17 minutes 10 seconds Finished: SUCCESS