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Started by upstream project "BIOFORMATS-test-repo" build number 209 originally caused by: Started by upstream project "Trigger" build number 235 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins8835808319315523311.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_33237_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 03:21:39,267 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:21:39,270 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 03:21:39,270 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:21:39,271 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:21:39,271 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:21:39,271 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:21:39,272 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:21:39,272 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:21:39,272 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:21:39,273 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:21:39,273 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:21:39,273 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:21:39,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:21:39,587 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:21:39,619 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:21:39,620 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:21:39,630 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:21:39,630 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:21:39,630 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:21:39,631 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:21:39,631 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 03:21:39,632 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 03:21:39,632 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 360 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-04 03:21:39,643] [main] java.version = 1.8.0_342 [testng] 03:21:39,647 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:21:39,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:21:39,699 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-04_03-21-39.log] [testng] 03:21:39,701 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-10-04 03:21:39,704] [main] testng.directory = /data [testng] [2024-10-04 03:21:39,704] [main] testng.configDirectory = /config [testng] [2024-10-04 03:21:39,718] [main] testng.multiplier = 1.0 [testng] [2024-10-04 03:21:39,718] [main] testng.in-memory = false [testng] [2024-10-04 03:21:39,718] [main] testng.allow-missing = false [testng] [2024-10-04 03:21:39,718] [main] user.language = en [testng] [2024-10-04 03:21:39,718] [main] user.country = ${user.country} [testng] [2024-10-04 03:21:39,719] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-04 03:23:26,834] [main] ---------------------------------------- [testng] [2024-10-04 03:23:26,835] [main] Total files: 15735 [testng] [2024-10-04 03:23:26,835] [main] Scan time: 107.115 s (6 ms/file) [testng] [2024-10-04 03:23:26,835] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-04 03:25:25,978] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] 03:25:25,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:25:25,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:25,980 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-04_03-25-25.log] [testng] 03:25:25,980 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6614f7f4 - End of configuration. [testng] [2024-10-04 03:25:26,858] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] 03:25:26,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:25:26,859 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:26,860 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-04_03-25-26.log] [testng] 03:25:26,860 |-INFO in ch.qos.logback.core.sift.SiftProcessor@172ce0 - End of configuration. [testng] [2024-10-04 03:25:28,291] [pool-1-thread-11] Initializing /data/converted/stephan/notok2.tif: [testng] 03:25:28,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:25:28,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:28,292 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-04_03-25-28.log] [testng] 03:25:28,293 |-INFO in ch.qos.logback.core.sift.SiftProcessor@497c4a5f - End of configuration. [testng] [2024-10-04 03:25:29,229] [pool-1-thread-10] Initializing /data/converted/lior/live+cf2b.tif: [testng] 03:25:29,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:25:29,229 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:29,230 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-04_03-25-29.log] [testng] 03:25:29,230 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c42ced9 - End of configuration. [testng] [2024-10-04 03:25:30,076] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] 03:25:30,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:25:30,076 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:30,077 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-04_03-25-30.log] [testng] 03:25:30,077 |-INFO in ch.qos.logback.core.sift.SiftProcessor@218016c0 - End of configuration. [testng] [2024-10-04 03:25:31,063] [pool-1-thread-8] Initializing /data/converted/converted/damian-compressed.tif: [testng] 03:25:31,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:25:31,064 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:31,064 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-04_03-25-31.log] [testng] 03:25:31,065 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22378c0b - End of configuration. [testng] [2024-10-04 03:25:31,825] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] 03:25:31,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:25:31,825 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:31,826 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-04_03-25-31.log] [testng] 03:25:31,826 |-INFO in ch.qos.logback.core.sift.SiftProcessor@540b3d49 - End of configuration. [testng] [2024-10-04 03:25:32,578] [pool-1-thread-6] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] 03:25:32,578 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:25:32,578 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:32,579 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-04_03-25-32.log] [testng] 03:25:32,579 |-INFO in ch.qos.logback.core.sift.SiftProcessor@374990c1 - End of configuration. [testng] [2024-10-04 03:25:33,491] [pool-1-thread-5] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] 03:25:33,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:25:33,491 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:33,492 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-04_03-25-33.log] [testng] 03:25:33,493 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22262545 - End of configuration. [testng] [2024-10-04 03:25:34,625] [pool-1-thread-4] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] 03:25:34,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:25:34,626 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:34,626 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-04_03-25-34.log] [testng] 03:25:34,627 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a6cdf1 - End of configuration. [testng] [2024-10-04 03:25:35,736] [pool-1-thread-3] Initializing /data/converted/lior/live+cf5b.tif: [testng] 03:25:35,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:25:35,736 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:35,737 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-04_03-25-35.log] [testng] 03:25:35,737 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69d79948 - End of configuration. [testng] [2024-10-04 03:25:36,761] [pool-1-thread-2] Initializing /data/converted/converted/mri-stack.tif: [testng] 03:25:36,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:25:36,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:25:36,762 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-04_03-25-36.log] [testng] 03:25:36,763 |-INFO in ch.qos.logback.core.sift.SiftProcessor@80d432c - End of configuration. [testng] [2024-10-04 03:25:54,011] [pool-1-thread-2] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-10-04 03:25:55,178] [pool-1-thread-8] Initializing /data/scott/Slide133-11.tif: [testng] [2024-10-04 03:25:56,501] [pool-1-thread-1] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-10-04 03:26:12,625] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-10-04 03:26:14,017] [pool-1-thread-10] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-10-04 03:26:15,156] [pool-1-thread-2] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-10-04 03:26:22,332] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] [2024-10-04 03:26:23,614] [pool-1-thread-1] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-10-04 03:26:33,365] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-10-04 03:26:58,019] [pool-1-thread-11] Initializing /data/converted/michel/a.tif: [testng] [2024-10-04 03:27:12,685] [pool-1-thread-11] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-10-04 03:27:35,971] [pool-1-thread-11] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-10-04 03:29:19,142] [pool-1-thread-1] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-10-04 03:30:07,624] [pool-1-thread-11] Initializing /data/scott/Slide133-04.tif: [testng] [2024-10-04 03:30:16,711] [pool-1-thread-10] Initializing /data/converted/converted/2chz.tif: [testng] [2024-10-04 03:30:32,781] [pool-1-thread-11] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-10-04 03:30:40,678] [pool-1-thread-9] Initializing /data/scott/Slide133-01.tif: [testng] [2024-10-04 03:30:52,126] [pool-1-thread-6] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-10-04 03:30:59,378] [pool-1-thread-1] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-10-04 03:31:01,741] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-10-04 03:31:05,179] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-10-04 03:31:07,637] [pool-1-thread-11] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-10-04 03:31:22,264] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-10-04 03:31:31,744] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-10-04 03:31:40,036] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-10-04 03:31:57,344] [pool-1-thread-9] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-10-04 03:31:59,699] [pool-1-thread-3] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-10-04 03:32:01,072] [pool-1-thread-12] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-10-04 03:32:20,030] [pool-1-thread-12] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-10-04 03:32:28,650] [pool-1-thread-10] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-10-04 03:32:53,984] [pool-1-thread-10] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2024-10-04 03:33:28,872] [pool-1-thread-2] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-10-04 03:33:36,503] [pool-1-thread-9] Initializing /data/converted/michel/b.tif: [testng] [2024-10-04 03:33:56,472] [pool-1-thread-2] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-10-04 03:34:05,693] [pool-1-thread-9] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-10-04 03:34:29,570] [pool-1-thread-11] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-10-04 03:34:55,478] [pool-1-thread-2] Initializing /data/scott/Slide133-08.tif: [testng] [2024-10-04 03:34:56,858] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-10-04 03:35:20,836] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-10-04 03:35:39,906] [pool-1-thread-2] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-10-04 03:35:42,979] [pool-1-thread-9] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-10-04 03:35:48,310] [pool-1-thread-10] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-10-04 03:36:07,158] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-10-04 03:36:46,756] [pool-1-thread-7] Initializing /data/othmar/mozaic.tif: [testng] [2024-10-04 03:37:11,893] [pool-1-thread-8] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-10-04 03:37:25,520] [pool-1-thread-8] Initializing /data/converted/nicolas/image.tif: [testng] [2024-10-04 03:37:40,245] [pool-1-thread-8] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-10-04 03:37:46,683] [pool-1-thread-5] Initializing /data/converted/converted/damian.tif: [testng] [2024-10-04 03:37:48,678] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-10-04 03:38:00,002] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-10-04 03:38:04,630] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-10-04 03:39:06,673] [pool-1-thread-4] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-10-04 03:39:11,705] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-10-04 03:39:25,217] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-10-04 03:39:29,005] [pool-1-thread-4] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-10-04 03:39:34,553] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-10-04 03:40:39,214] [pool-1-thread-11] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-10-04 03:40:57,978] [pool-1-thread-11] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-10-04 03:41:05,719] [pool-1-thread-8] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-10-04 03:41:30,402] [pool-1-thread-8] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-10-04 03:41:57,030] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-10-04 03:42:04,676] [pool-1-thread-4] Initializing /data/converted/michel/e.tif: [testng] [2024-10-04 03:42:31,516] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-10-04 03:42:39,837] [pool-1-thread-4] Initializing /data/converted/sebastien/test.tif: [testng] [2024-10-04 03:42:54,415] [pool-1-thread-5] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-10-04 03:44:07,491] [pool-1-thread-7] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-10-04 03:44:11,537] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-10-04 03:44:14,236] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-10-04 03:44:23,395] [pool-1-thread-7] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-10-04 03:44:35,931] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-10-04 03:46:18,491] [pool-1-thread-10] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-10-04 03:47:40,162] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-10-04 03:48:17,120] [pool-1-thread-1] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-10-04 03:48:35,994] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-10-04 03:48:47,823] [pool-1-thread-3] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-10-04 03:48:56,596] [pool-1-thread-8] Initializing /data/converted/dietmar/138.tif: [testng] [2024-10-04 03:50:36,315] [pool-1-thread-3] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-10-04 03:50:52,328] [pool-1-thread-3] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-10-04 03:51:09,618] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-10-04 03:51:25,164] [pool-1-thread-4] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-10-04 03:52:43,335] [pool-1-thread-8] Initializing /data/converted/michel/c.tif: [testng] [2024-10-04 03:52:51,146] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-10-04 03:53:04,306] [pool-1-thread-8] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-10-04 03:53:09,679] [pool-1-thread-9] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-10-04 03:53:24,348] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-10-04 03:53:26,679] [pool-1-thread-8] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-10-04 03:53:48,230] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-10-04 03:54:40,856] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-10-04 03:55:15,959] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-10-04 03:55:19,977] [pool-1-thread-4] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-10-04 03:55:43,373] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-10-04 03:56:27,400] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-10-04 03:56:48,389] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-10-04 03:57:51,970] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-10-04 03:58:18,434] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-10-04 03:58:30,583] [pool-1-thread-9] Initializing /data/converted/michel/d.tif: [testng] [2024-10-04 03:58:36,785] [pool-1-thread-8] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-10-04 03:58:54,070] [pool-1-thread-9] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-10-04 04:00:01,500] [pool-1-thread-8] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-10-04 04:00:08,755] [pool-1-thread-10] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-10-04 04:00:15,824] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-10-04 04:00:19,885] [pool-1-thread-8] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-10-04 04:00:43,888] [pool-1-thread-4] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-10-04 04:00:55,409] [pool-1-thread-8] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-10-04 04:00:58,490] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-10-04 04:01:18,248] [pool-1-thread-4] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-10-04 04:01:31,417] [pool-1-thread-2] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-10-04 04:01:35,934] [pool-1-thread-3] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-10-04 04:01:42,261] [pool-1-thread-8] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-10-04 04:01:50,486] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-10-04 04:01:56,442] [pool-1-thread-8] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-10-04 04:02:11,169] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-10-04 04:02:12,283] [pool-1-thread-4] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] 04:26:32,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:26:32,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:26:32,026 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-04_04-26-32.log] [testng] 04:26:32,026 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2fc378cd - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 64 minutes 58 seconds Finished: SUCCESS