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Started by upstream project "BIOFORMATS-test-repo" build number 211 originally caused by: Started by upstream project "Trigger" build number 237 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins12768732834546712002.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_33478_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:36:16,565 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:36:16,567 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 01:36:16,567 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:36:16,568 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:36:16,568 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:36:16,568 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:36:16,568 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:36:16,568 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:36:16,569 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:36:16,569 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:36:16,570 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:36:16,570 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:36:16,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:36:16,728 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:36:16,750 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:36:16,750 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:36:16,756 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:36:16,756 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:36:16,756 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:36:16,756 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:36:16,756 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 01:36:16,757 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 01:36:16,757 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 188 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-06 01:36:16,766] [main] java.version = 17.0.2 [testng] 01:36:16,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:36:16,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:36:16,827 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-06_01-36-16.log] [testng] 01:36:16,829 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-10-06 01:36:16,831] [main] testng.directory = /data [testng] [2024-10-06 01:36:16,831] [main] testng.configDirectory = /config [testng] [2024-10-06 01:36:16,840] [main] testng.multiplier = 1.0 [testng] [2024-10-06 01:36:16,840] [main] testng.in-memory = false [testng] [2024-10-06 01:36:16,841] [main] testng.allow-missing = false [testng] [2024-10-06 01:36:16,841] [main] user.language = en [testng] [2024-10-06 01:36:16,841] [main] user.country = ${user.country} [testng] [2024-10-06 01:36:16,841] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-06 01:36:26,819] [main] ---------------------------------------- [testng] [2024-10-06 01:36:26,819] [main] Total files: 259 [testng] [2024-10-06 01:36:26,819] [main] Scan time: 9.978 s (38 ms/file) [testng] [2024-10-06 01:36:26,819] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-06 01:41:19,699] [pool-1-thread-1] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 01:41:19,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:41:19,700 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:19,701 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-06_01-41-19.log] [testng] 01:41:19,702 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49b7290a - End of configuration. [testng] [2024-10-06 01:41:20,130] [pool-1-thread-12] Initializing /data/yoshihito/XY.oif: [testng] 01:41:20,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:41:20,131 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:20,131 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-06_01-41-20.log] [testng] 01:41:20,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@22c27c61 - End of configuration. [testng] [2024-10-06 01:41:20,208] [pool-1-thread-11] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] 01:41:20,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:41:20,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:20,208 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-06_01-41-20.log] [testng] 01:41:20,209 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c6dc7be - End of configuration. [testng] [2024-10-06 01:41:20,332] [pool-1-thread-10] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] 01:41:20,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:41:20,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:20,333 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-06_01-41-20.log] [testng] 01:41:20,334 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6f0b629e - End of configuration. [testng] [2024-10-06 01:41:20,415] [pool-1-thread-9] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] 01:41:20,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:41:20,415 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:20,416 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-06_01-41-20.log] [testng] 01:41:20,417 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1429c71b - End of configuration. [testng] [2024-10-06 01:41:20,487] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] 01:41:20,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:41:20,488 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:20,489 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-06_01-41-20.log] [testng] 01:41:20,490 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4bef57b1 - End of configuration. [testng] [2024-10-06 01:41:20,773] [pool-1-thread-7] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] 01:41:20,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:41:20,773 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:20,774 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-06_01-41-20.log] [testng] 01:41:20,774 |-INFO in ch.qos.logback.core.sift.SiftProcessor@44859c38 - End of configuration. [testng] [2024-10-06 01:41:20,949] [pool-1-thread-6] Initializing /data/stefan/test-with-stefan071024.oib: [testng] 01:41:20,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:41:20,950 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:20,950 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-06_01-41-20.log] [testng] 01:41:20,951 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f85131 - End of configuration. [testng] [2024-10-06 01:41:22,321] [pool-1-thread-5] Initializing /data/johannes/Image0016/Image0016.oif: [testng] 01:41:22,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:41:22,322 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:22,323 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-06_01-41-22.log] [testng] 01:41:22,323 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6899e5dd - End of configuration. [testng] [2024-10-06 01:41:22,526] [pool-1-thread-4] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] 01:41:22,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:41:22,527 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:22,527 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-06_01-41-22.log] [testng] 01:41:22,528 |-INFO in ch.qos.logback.core.sift.SiftProcessor@40fc9a9e - End of configuration. [testng] [2024-10-06 01:41:22,705] [pool-1-thread-3] Initializing /data/glen/simulstack.oif: [testng] 01:41:22,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:41:22,705 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:22,707 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-06_01-41-22.log] [testng] 01:41:22,707 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f36bc1b - End of configuration. [testng] [2024-10-06 01:41:23,122] [pool-1-thread-2] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] 01:41:23,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:41:23,122 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:41:23,122 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-06_01-41-23.log] [testng] 01:41:23,123 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73a7d506 - End of configuration. [testng] [2024-10-06 01:41:26,450] [pool-1-thread-10] Initializing /data/aryeh/1h.oib: [testng] [2024-10-06 01:41:27,104] [pool-1-thread-9] Initializing /data/sten/01.oib: [testng] [2024-10-06 01:41:27,249] [pool-1-thread-7] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-06 01:41:30,714] [pool-1-thread-4] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-06 01:41:34,864] [pool-1-thread-2] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-06 01:41:35,342] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-06 01:41:35,855] [pool-1-thread-1] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-06 01:41:36,848] [pool-1-thread-12] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-06 01:41:37,431] [pool-1-thread-9] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-06 01:41:38,507] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-06 01:41:38,959] [pool-1-thread-1] Initializing /data/glen/Image0002.oif: [testng] [2024-10-06 01:41:39,749] [pool-1-thread-2] Initializing /data/michael/CELL3.oib: [testng] [2024-10-06 01:41:39,941] [pool-1-thread-11] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-06 01:41:40,976] [pool-1-thread-10] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-06 01:41:41,643] [pool-1-thread-9] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-06 01:41:41,699] [pool-1-thread-2] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-06 01:41:42,206] [pool-1-thread-9] Initializing /data/david/Image0016.oif: [testng] [2024-10-06 01:41:42,841] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-10-06 01:41:43,726] [pool-1-thread-12] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-06 01:41:45,808] [pool-1-thread-2] Initializing /data/glen/simulstack.oib: [testng] [2024-10-06 01:41:47,417] [pool-1-thread-6] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-06 01:41:48,332] [pool-1-thread-2] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-10-06 01:41:49,656] [pool-1-thread-6] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-06 01:41:51,269] [pool-1-thread-2] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-06 01:41:53,528] [pool-1-thread-10] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-06 01:41:54,107] [pool-1-thread-6] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-06 01:41:56,885] [pool-1-thread-10] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-06 01:41:58,787] [pool-1-thread-11] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-06 01:41:59,519] [pool-1-thread-6] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-06 01:42:00,261] [pool-1-thread-2] Initializing /data/david/Image0016.oib: [testng] [2024-10-06 01:42:01,365] [pool-1-thread-6] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-06 01:42:02,810] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] [2024-10-06 01:42:04,542] [pool-1-thread-11] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-06 01:42:04,908] [pool-1-thread-6] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-06 01:42:09,070] [pool-1-thread-10] Initializing /data/molly/11OCT2.OIF: [testng] [2024-10-06 01:42:18,421] [pool-1-thread-2] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-06 01:42:19,393] [pool-1-thread-9] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-06 01:42:22,248] [pool-1-thread-11] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-06 01:42:24,714] [pool-1-thread-2] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-06 01:42:29,285] [pool-1-thread-5] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-10-06 01:42:32,986] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-06 01:42:59,082] [pool-1-thread-11] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-06 01:43:01,099] [pool-1-thread-11] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-06 01:43:09,945] [pool-1-thread-6] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-06 01:43:16,186] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-10-06 01:43:57,202] [pool-1-thread-6] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-06 01:43:58,799] [pool-1-thread-6] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-06 01:44:00,922] [pool-1-thread-6] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-06 01:47:03,065] [pool-1-thread-8] Initializing /data/simon/never_worked.oib: [testng] [2024-10-06 01:47:07,252] [pool-1-thread-8] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-06 01:47:15,854] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-06 01:47:17,233] [pool-1-thread-3] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-06 01:47:22,302] [pool-1-thread-3] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-10-06 01:47:31,566] [pool-1-thread-8] Initializing /data/monica/Image0056.oif: [testng] [2024-10-06 01:48:02,593] [pool-1-thread-8] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-06 01:48:04,608] [pool-1-thread-8] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-06 01:48:10,487] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-10-06 01:48:15,657] [pool-1-thread-8] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-06 01:48:19,886] [pool-1-thread-8] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-06 01:48:23,988] [pool-1-thread-8] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-06 01:49:44,996] [pool-1-thread-1] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-06 01:49:47,182] [pool-1-thread-1] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-06 01:49:50,125] [pool-1-thread-1] Initializing /data/molly/11OCT5.OIF: [testng] [2024-10-06 01:50:41,089] [pool-1-thread-6] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-06 01:50:43,130] [pool-1-thread-6] Initializing /data/jae/Image0001.oib: [testng] [2024-10-06 01:50:46,682] [pool-1-thread-6] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-06 01:50:49,767] [pool-1-thread-6] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-10-06 01:51:09,882] [pool-1-thread-6] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-06 01:51:44,888] [pool-1-thread-12] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-06 01:51:48,143] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-06 01:51:50,939] [pool-1-thread-12] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-06 01:53:23,122] [pool-1-thread-9] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-06 01:53:35,014] [pool-1-thread-3] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-06 01:53:38,049] [pool-1-thread-3] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-06 01:53:40,994] [pool-1-thread-3] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-06 01:53:45,296] [pool-1-thread-3] Initializing /data/pedro/plv-test.oib: [testng] [2024-10-06 01:53:48,491] [pool-1-thread-3] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-10-06 01:53:51,808] [pool-1-thread-3] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-06 01:54:17,390] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-06 01:54:22,356] [pool-1-thread-2] Initializing /data/johannes/step2.bmp: [testng] [2024-10-06 01:54:24,601] [pool-1-thread-2] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-06 01:55:49,255] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-06 01:55:53,496] [pool-1-thread-7] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-06 01:55:56,646] [pool-1-thread-3] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-06 01:55:58,423] [pool-1-thread-7] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-06 01:56:01,625] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-10-06 01:56:02,695] [pool-1-thread-3] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-06 01:56:04,911] [pool-1-thread-7] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-10-06 01:56:07,629] [pool-1-thread-3] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-10-06 01:56:10,800] [pool-1-thread-3] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-06 01:56:31,035] [pool-1-thread-7] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-10-06 01:57:06,747] [pool-1-thread-7] Initializing /data/johannes/step1.bmp: [testng] [2024-10-06 01:57:09,157] [pool-1-thread-7] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-10-06 01:57:11,325] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-10-06 01:57:13,144] [pool-1-thread-7] Initializing /data/christian/20min.oif: [testng] [2024-10-06 01:57:17,121] [pool-1-thread-8] Initializing /data/marc/V0606L.oib: [testng] [2024-10-06 01:57:28,912] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-06 01:57:34,029] [pool-1-thread-7] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-06 01:57:46,166] [pool-1-thread-8] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-06 01:57:49,715] [pool-1-thread-8] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-10-06 01:57:53,466] [pool-1-thread-8] Initializing /data/johannes/step3.bmp: [testng] [2024-10-06 01:57:55,198] [pool-1-thread-8] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-06 01:58:07,242] [pool-1-thread-3] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-06 01:58:10,129] [pool-1-thread-3] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-10-06 01:58:13,599] [pool-1-thread-3] Initializing /data/marc/V0606J.oib: [testng] [2024-10-06 01:58:31,541] [pool-1-thread-3] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-06 01:59:29,236] [pool-1-thread-2] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-06 01:59:33,074] [pool-1-thread-2] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-06 01:59:38,078] [pool-1-thread-11] Initializing /data/karl/Image0009.oib: [testng] [2024-10-06 01:59:40,918] [pool-1-thread-11] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-10-06 01:59:58,387] [pool-1-thread-11] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-06 01:59:59,849] [pool-1-thread-6] Initializing /data/allan/62909#1.oib: [testng] [2024-10-06 02:00:02,196] [pool-1-thread-6] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-06 02:00:23,992] [pool-1-thread-11] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-06 02:00:28,087] [pool-1-thread-2] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-06 02:00:31,333] [pool-1-thread-3] Initializing /data/molly/11OCT4.OIF: [testng] [2024-10-06 02:00:53,386] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-06 02:00:56,109] [pool-1-thread-11] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-06 02:00:57,708] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-06 02:01:02,386] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-06 02:01:04,575] [pool-1-thread-4] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-06 02:01:05,224] [pool-1-thread-1] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-06 02:01:10,415] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-06 02:01:17,041] [pool-1-thread-4] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-06 02:01:39,114] [pool-1-thread-11] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-06 02:01:42,871] [pool-1-thread-11] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-06 02:01:46,735] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-06 02:01:51,268] [pool-1-thread-11] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-06 02:01:53,498] [pool-1-thread-11] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-06 02:01:56,017] [pool-1-thread-11] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-06 02:01:59,168] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-06 02:02:03,605] [pool-1-thread-11] Initializing /data/johannes/step4.bmp: [testng] 02:43:42,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:43:42,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:43:42,966 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-06_02-43-42.log] [testng] 02:43:42,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e9c23b7 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 67 minutes 31 seconds Finished: SUCCESS