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Started by upstream project "BIOFORMATS-test-repo" build number 211 originally caused by: Started by upstream project "Trigger" build number 237 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins3809808507336817623.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_33565_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 03:23:31,024 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 03:23:31,026 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service. [testng] 03:23:31,026 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:23:31,026 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 03:23:31,027 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 03:23:31,027 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 03:23:31,027 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 03:23:31,027 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:23:31,028 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 03:23:31,029 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 03:23:31,029 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 03:23:31,029 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 03:23:31,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 03:23:31,331 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 03:23:31,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 03:23:31,355 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 03:23:31,360 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 03:23:31,360 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 03:23:31,361 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 03:23:31,361 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 03:23:31,361 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration. [testng] 03:23:31,362 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point [testng] 03:23:31,362 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 334 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-06 03:23:31,371] [main] java.version = 17.0.2 [testng] 03:23:31,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 03:23:31,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:23:31,579 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-06_03-23-31.log] [testng] 03:23:31,581 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration. [testng] [2024-10-06 03:23:31,587] [main] testng.directory = /data [testng] [2024-10-06 03:23:31,587] [main] testng.configDirectory = /config [testng] [2024-10-06 03:23:31,667] [main] testng.multiplier = 1.0 [testng] [2024-10-06 03:23:31,668] [main] testng.in-memory = false [testng] [2024-10-06 03:23:31,668] [main] testng.allow-missing = false [testng] [2024-10-06 03:23:31,668] [main] user.language = en [testng] [2024-10-06 03:23:31,668] [main] user.country = ${user.country} [testng] [2024-10-06 03:23:31,668] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-06 03:24:18,822] [main] ---------------------------------------- [testng] [2024-10-06 03:24:18,822] [main] Total files: 15735 [testng] [2024-10-06 03:24:18,823] [main] Scan time: 47.154 s (2 ms/file) [testng] [2024-10-06 03:24:18,823] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-06 03:24:52,298] [pool-1-thread-1] Initializing /data/converted/vladan/vladan.tif: [testng] 03:24:52,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:24:52,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:52,299 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-06_03-24-52.log] [testng] 03:24:52,300 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72c42d66 - End of configuration. [testng] [2024-10-06 03:24:52,552] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] 03:24:52,552 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 03:24:52,553 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:52,554 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-06_03-24-52.log] [testng] 03:24:52,554 |-INFO in ch.qos.logback.core.sift.SiftProcessor@180dc5b - End of configuration. [testng] [2024-10-06 03:24:53,090] [pool-1-thread-11] Initializing /data/converted/converted/mri-stack.tif: [testng] 03:24:53,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 03:24:53,090 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:53,091 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-06_03-24-53.log] [testng] 03:24:53,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@60a0c609 - End of configuration. [testng] [2024-10-06 03:24:53,233] [pool-1-thread-10] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] 03:24:53,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 03:24:53,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:53,234 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-06_03-24-53.log] [testng] 03:24:53,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4032987e - End of configuration. [testng] [2024-10-06 03:24:53,915] [pool-1-thread-9] Initializing /data/converted/karsten/Bild1.tif: [testng] 03:24:53,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 03:24:53,915 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:53,916 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-06_03-24-53.log] [testng] 03:24:53,917 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b770500 - End of configuration. [testng] [2024-10-06 03:24:54,045] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] 03:24:54,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 03:24:54,045 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:54,046 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-06_03-24-54.log] [testng] 03:24:54,046 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6892a32d - End of configuration. [testng] [2024-10-06 03:24:54,366] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] 03:24:54,367 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 03:24:54,367 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:54,367 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-06_03-24-54.log] [testng] 03:24:54,368 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1661ae02 - End of configuration. [testng] [2024-10-06 03:24:54,734] [pool-1-thread-6] Initializing /data/converted/stephan/notok1.tif: [testng] 03:24:54,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:24:54,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:54,735 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-06_03-24-54.log] [testng] 03:24:54,735 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31025931 - End of configuration. [testng] [2024-10-06 03:24:54,977] [pool-1-thread-5] Initializing /data/converted/eirinn/demo-tile.tif: [testng] 03:24:54,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 03:24:54,977 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:54,978 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-06_03-24-54.log] [testng] 03:24:54,978 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c481d0e - End of configuration. [testng] [2024-10-06 03:24:55,145] [pool-1-thread-4] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 03:24:55,145 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 03:24:55,145 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:55,145 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-06_03-24-55.log] [testng] 03:24:55,146 |-INFO in ch.qos.logback.core.sift.SiftProcessor@29246b14 - End of configuration. [testng] [2024-10-06 03:24:55,287] [pool-1-thread-3] Initializing /data/converted/michel/d.tif: [testng] 03:24:55,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 03:24:55,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:55,288 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-06_03-24-55.log] [testng] 03:24:55,288 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d6166cd - End of configuration. [testng] [2024-10-06 03:24:55,418] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] 03:24:55,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 03:24:55,418 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:24:55,419 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-06_03-24-55.log] [testng] 03:24:55,419 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d9454f9 - End of configuration. [testng] [2024-10-06 03:25:01,775] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-10-06 03:25:02,269] [pool-1-thread-4] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-10-06 03:25:03,715] [pool-1-thread-3] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-10-06 03:25:04,703] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-10-06 03:25:06,811] [pool-1-thread-5] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-10-06 03:25:14,837] [pool-1-thread-3] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-10-06 03:25:26,627] [pool-1-thread-3] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-10-06 03:25:29,937] [pool-1-thread-6] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-10-06 03:25:34,439] [pool-1-thread-3] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-10-06 03:25:36,476] [pool-1-thread-4] Initializing /data/converted/michel/c.tif: [testng] [2024-10-06 03:25:47,112] [pool-1-thread-4] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-10-06 03:26:14,405] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-10-06 03:26:17,414] [pool-1-thread-4] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-10-06 03:28:19,057] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-10-06 03:28:21,716] [pool-1-thread-3] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-10-06 03:28:57,055] [pool-1-thread-3] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-10-06 03:29:19,853] [pool-1-thread-3] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-10-06 03:29:27,189] [pool-1-thread-2] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-10-06 03:29:30,756] [pool-1-thread-11] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-10-06 03:29:34,404] [pool-1-thread-7] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-10-06 03:29:41,504] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-10-06 03:29:48,103] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-10-06 03:29:49,358] [pool-1-thread-11] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-10-06 03:29:50,395] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-10-06 03:29:56,526] [pool-1-thread-12] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-10-06 03:30:11,466] [pool-1-thread-7] Initializing /data/converted/converted/damian.tif: [testng] [2024-10-06 03:30:16,842] [pool-1-thread-12] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-10-06 03:30:27,633] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-10-06 03:30:28,781] [pool-1-thread-7] Initializing /data/othmar/mozaic.tif: [testng] [2024-10-06 03:30:51,651] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-10-06 03:31:26,987] [pool-1-thread-8] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-10-06 03:31:47,470] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-10-06 03:32:19,582] [pool-1-thread-8] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-10-06 03:32:20,584] [pool-1-thread-11] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-10-06 03:32:28,165] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-10-06 03:32:37,888] [pool-1-thread-1] Initializing /data/converted/converted/2chz.tif: [testng] [2024-10-06 03:32:38,904] [pool-1-thread-8] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-10-06 03:33:01,059] [pool-1-thread-7] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] [2024-10-06 03:33:19,905] [pool-1-thread-7] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-10-06 03:34:32,231] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-10-06 03:34:38,838] [pool-1-thread-1] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-10-06 03:35:14,779] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-10-06 03:35:37,965] [pool-1-thread-2] Initializing /data/converted/nicolas/image.tif: [testng] [2024-10-06 03:35:41,275] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-10-06 03:35:44,723] [pool-1-thread-9] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-10-06 03:35:52,321] [pool-1-thread-2] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-10-06 03:35:53,455] [pool-1-thread-1] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-10-06 03:35:58,931] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-10-06 03:36:05,787] [pool-1-thread-10] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-10-06 03:36:35,443] [pool-1-thread-1] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-10-06 03:37:16,198] [pool-1-thread-9] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-10-06 03:37:34,770] [pool-1-thread-3] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-10-06 03:37:35,677] [pool-1-thread-9] Initializing /data/converted/dietmar/138.tif: [testng] [2024-10-06 03:38:43,283] [pool-1-thread-3] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-10-06 03:38:57,512] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-10-06 03:40:13,256] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-10-06 03:40:19,453] [pool-1-thread-4] Initializing /data/converted/michel/a.tif: [testng] [2024-10-06 03:40:29,737] [pool-1-thread-10] Initializing /data/scott/Slide133-04.tif: [testng] [2024-10-06 03:40:31,566] [pool-1-thread-4] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] [2024-10-06 03:40:49,729] [pool-1-thread-10] Initializing /data/scott/Slide133-11.tif: [testng] [2024-10-06 03:41:07,356] [pool-1-thread-10] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-10-06 03:41:20,487] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-10-06 03:41:47,390] [pool-1-thread-9] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-10-06 03:41:57,789] [pool-1-thread-2] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-10-06 03:42:07,893] [pool-1-thread-1] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-10-06 03:42:11,077] [pool-1-thread-2] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-10-06 03:42:35,608] [pool-1-thread-2] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-10-06 03:42:36,893] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-10-06 03:42:40,672] [pool-1-thread-1] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-10-06 03:42:55,410] [pool-1-thread-3] Initializing /data/converted/michel/e.tif: [testng] [2024-10-06 03:43:22,926] [pool-1-thread-1] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-10-06 03:43:28,256] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-10-06 03:43:43,436] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-10-06 03:44:39,611] [pool-1-thread-5] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-10-06 03:45:58,375] [pool-1-thread-10] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-10-06 03:46:25,831] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-10-06 03:47:07,370] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-10-06 03:47:38,550] [pool-1-thread-2] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-10-06 03:48:02,694] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-10-06 03:48:12,853] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-10-06 03:48:22,948] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-10-06 03:49:38,264] [pool-1-thread-5] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-10-06 03:50:55,243] [pool-1-thread-10] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] [2024-10-06 03:51:16,372] [pool-1-thread-10] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-10-06 03:51:44,741] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-10-06 03:52:25,916] [pool-1-thread-7] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-10-06 03:52:33,225] [pool-1-thread-3] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-10-06 03:52:36,628] [pool-1-thread-12] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-10-06 03:52:43,267] [pool-1-thread-7] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-10-06 03:52:53,401] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-10-06 03:53:02,103] [pool-1-thread-7] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-10-06 03:53:17,105] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-10-06 03:53:24,350] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-10-06 03:53:59,219] [pool-1-thread-2] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] [2024-10-06 03:54:06,468] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2024-10-06 03:54:29,652] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-10-06 03:54:45,170] [pool-1-thread-3] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-10-06 03:55:09,681] [pool-1-thread-8] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-10-06 03:55:24,949] [pool-1-thread-8] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-10-06 03:57:17,377] [pool-1-thread-4] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-10-06 03:57:22,212] [pool-1-thread-3] Initializing /data/scott/Slide133-08.tif: [testng] [2024-10-06 03:57:32,971] [pool-1-thread-4] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-10-06 03:57:41,851] [pool-1-thread-3] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-10-06 03:57:45,979] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] [2024-10-06 03:57:50,141] [pool-1-thread-10] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-10-06 03:57:57,072] [pool-1-thread-10] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-10-06 03:58:05,795] [pool-1-thread-5] Initializing /data/scott/Slide133-01.tif: [testng] [2024-10-06 03:58:07,543] [pool-1-thread-4] Initializing /data/converted/sebastien/test.tif: [testng] [2024-10-06 03:58:20,079] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-10-06 03:58:29,538] [pool-1-thread-5] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-10-06 03:58:31,233] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-10-06 03:58:49,865] [pool-1-thread-1] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-10-06 03:59:08,931] [pool-1-thread-1] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] 04:29:52,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:29:52,641 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:29:52,643 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-06_04-29-52.log] [testng] 04:29:52,643 |-INFO in ch.qos.logback.core.sift.SiftProcessor@12aa9370 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 66 minutes 25 seconds Finished: SUCCESS