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Started by upstream project "BIOFORMATS-test-repo" build number 211
originally caused by:
 Started by upstream project "Trigger" build number 237
 originally caused by:
  Started by timer
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6
[BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins13614541814074244672.sh
+ '[' cellr = slidebook ']'
++ date +%u
+ '[' 7 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_33586_merge_ci -v /uod/idr/repos/curated/cellr:/data -v /uod/idr-scratch/merge-ci/curated/cellr:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket
   [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket
   [testng] File leak detector installed
   [testng] 03:57:08,153 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 03:57:08,155 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - No custom configurators were discovered as a service.
   [testng] 03:57:08,155 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:57:08,155 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 03:57:08,156 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 03:57:08,156 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 03:57:08,156 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 03:57:08,156 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:57:08,157 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 03:57:08,157 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 03:57:08,158 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 03:57:08,158 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 03:57:08,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 03:57:08,358 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 03:57:08,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 03:57:08,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 03:57:08,387 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 03:57:08,387 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 03:57:08,387 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 03:57:08,387 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 03:57:08,387 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@576d5deb - End of configuration.
   [testng] 03:57:08,388 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6fdbe764 - Registering current configuration as safe fallback point
   [testng] 03:57:08,388 |-INFO in ch.qos.logback.classic.util.ContextInitializer@d6e7bab - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 231 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-10-06 03:57:08,398] [main] java.version = 17.0.2
   [testng] 03:57:08,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 03:57:08,401 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 03:57:08,443 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-06_03-57-08.log]
   [testng] 03:57:08,445 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37313c65 - End of configuration.
   [testng] [2024-10-06 03:57:08,447] [main] testng.directory = /data
   [testng] [2024-10-06 03:57:08,447] [main] testng.configDirectory = /config
   [testng] [2024-10-06 03:57:08,455] [main] testng.multiplier = 1.0
   [testng] [2024-10-06 03:57:08,456] [main] testng.in-memory = false
   [testng] [2024-10-06 03:57:08,456] [main] testng.allow-missing = false
   [testng] [2024-10-06 03:57:08,456] [main] user.language = en
   [testng] [2024-10-06 03:57:08,457] [main] user.country = ${user.country}
   [testng] [2024-10-06 03:57:08,457] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-10-06 03:58:27,544] [main] ----------------------------------------
   [testng] [2024-10-06 03:58:27,545] [main] Total files: 256
   [testng] [2024-10-06 03:58:27,545] [main] Scan time: 79.087 s (308 ms/file)
   [testng] [2024-10-06 03:58:27,545] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 13 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-10-06 04:01:32,712] [pool-1-thread-1] Initializing /data/qa-17107/example2/example2_d.mtb: 
   [testng] 04:01:32,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 04:01:32,713 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:32,714 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-06_04-01-32.log]
   [testng] 04:01:32,714 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52c4ada3 - End of configuration.
   [testng] [2024-10-06 04:01:33,236] [pool-1-thread-12] Initializing /data/viktorie/test/test_d.mtb: 
   [testng] 04:01:33,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 04:01:33,237 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:33,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-06_04-01-33.log]
   [testng] 04:01:33,238 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5501ec51 - End of configuration.
   [testng] [2024-10-06 04:01:33,636] [pool-1-thread-11] Initializing /data/viktorie/090902/090902_d.mtb: 
   [testng] 04:01:33,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 04:01:33,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:33,637 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-06_04-01-33.log]
   [testng] 04:01:33,638 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b05686a - End of configuration.
   [testng] [2024-10-06 04:01:34,124] [pool-1-thread-10] Initializing /data/qa-17107/LifeScienceDemo/LifeScienceDemoSTAR_d.mtb: 
   [testng] 04:01:34,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 04:01:34,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:34,125 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-06_04-01-34.log]
   [testng] 04:01:34,125 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2eb01ba8 - End of configuration.
   [testng] [2024-10-06 04:01:34,576] [pool-1-thread-9] Initializing /data/qa-17107/plain/Plain_d.mtb: 
   [testng] 04:01:34,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 04:01:34,576 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:34,577 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-06_04-01-34.log]
   [testng] 04:01:34,577 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9181412 - End of configuration.
   [testng] [2024-10-06 04:01:35,070] [pool-1-thread-8] Initializing /data/qa-6659/12-07-05/12-07-05_d.mtb: 
   [testng] 04:01:35,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 04:01:35,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:35,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-06_04-01-35.log]
   [testng] 04:01:35,071 |-INFO in ch.qos.logback.core.sift.SiftProcessor@719e3858 - End of configuration.
   [testng] [2024-10-06 04:01:37,080] [pool-1-thread-7] Initializing /data/colin/08-10-09/08-10-09_d.mtb: 
   [testng] 04:01:37,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 04:01:37,080 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:37,081 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-06_04-01-37.log]
   [testng] 04:01:37,082 |-INFO in ch.qos.logback.core.sift.SiftProcessor@72f75ccd - End of configuration.
   [testng] [2024-10-06 04:01:41,309] [pool-1-thread-6] Initializing /data/viktorie/Structure.jpg: 
   [testng] 04:01:41,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 04:01:41,309 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:41,309 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-06_04-01-41.log]
   [testng] 04:01:41,310 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2516b030 - End of configuration.
   [testng] [2024-10-06 04:01:41,421] [pool-1-thread-5] Initializing /data/qa-17107/MaterialsDemo/MaterialsDemo_d.mtb: 
   [testng] 04:01:41,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 04:01:41,421 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:41,422 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-06_04-01-41.log]
   [testng] 04:01:41,422 |-INFO in ch.qos.logback.core.sift.SiftProcessor@64006215 - End of configuration.
   [testng] [2024-10-06 04:01:42,090] [pool-1-thread-4] Initializing /data/colin/07-06-21/07-06-21_d.mtb: 
   [testng] 04:01:42,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 04:01:42,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:42,091 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-06_04-01-42.log]
   [testng] 04:01:42,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cbe9e86 - End of configuration.
   [testng] [2024-10-06 04:01:42,731] [pool-1-thread-3] Initializing /data/clare/set_27_on_d.mtb: 
   [testng] 04:01:42,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 04:01:42,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:42,732 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-06_04-01-42.log]
   [testng] 04:01:42,733 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5b34d2fe - End of configuration.
   [testng] [2024-10-06 04:01:43,732] [pool-1-thread-2] Initializing /data/viktorie/2Channels.tif: 
   [testng] 04:01:43,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 04:01:43,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 04:01:43,733 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-06_04-01-43.log]
   [testng] 04:01:43,733 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11c8966d - End of configuration.
   [testng] [2024-10-06 04:01:48,336] [pool-1-thread-6] Initializing /data/kees/Mariaelena_d.mtb: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 689, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 6 minutes 18 seconds
Finished: SUCCESS