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Started by upstream project "BIOFORMATS-test-repo" build number 212 originally caused by: Started by upstream project "Trigger" build number 238 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins13102381315104199061.sh + '[' perkinelmer-densitometer = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_33668_merge_ci -v /uod/idr/repos/curated/perkinelmer-densitometer:/data -v /uod/idr-scratch/merge-ci/curated/perkinelmer-densitometer:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:18:30,543 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:18:30,687 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:18:30,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:18:30,749 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:18:31,004 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:18:31,004 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:18:31,004 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:18:31,005 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:18:31,005 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:18:31,006 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:18:31,006 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 916 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-07 02:18:31,017] [main] java.version = 1.8.0_342 [testng] 02:18:31,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:18:31,021 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:18:31,095 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-07_02-18-31.log] [testng] 02:18:31,097 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-10-07 02:18:31,100] [main] testng.directory = /data [testng] [2024-10-07 02:18:31,100] [main] testng.configDirectory = /config [testng] [2024-10-07 02:18:31,182] [main] testng.multiplier = 1.0 [testng] [2024-10-07 02:18:31,183] [main] testng.in-memory = false [testng] [2024-10-07 02:18:31,183] [main] testng.allow-missing = false [testng] [2024-10-07 02:18:31,183] [main] user.language = fr [testng] [2024-10-07 02:18:31,183] [main] user.country = FR [testng] [2024-10-07 02:18:31,183] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-07 02:18:47,145] [main] ---------------------------------------- [testng] [2024-10-07 02:18:47,145] [main] Total files: 19 [testng] [2024-10-07 02:18:47,146] [main] Scan time: 15.962 s (840 ms/file) [testng] [2024-10-07 02:18:47,146] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 11 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-07 02:19:03,557] [pool-1-thread-1] Initializing /data/ascb/Y7616001.hdr: [testng] 02:19:03,557 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:19:03,558 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:03,558 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-07_02-19-03.log] [testng] 02:19:03,559 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2b683477 - End of configuration. [testng] [2024-10-07 02:19:04,063] [pool-1-thread-11] Initializing /data/ascb/PT1173A001.hdr: [testng] 02:19:04,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:19:04,063 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:04,064 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-07_02-19-04.log] [testng] 02:19:04,064 |-INFO in ch.qos.logback.core.sift.SiftProcessor@741695e9 - End of configuration. [testng] [2024-10-07 02:19:04,574] [pool-1-thread-10] Initializing /data/ascb/1/T8710001.hdr: [testng] 02:19:04,574 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:19:04,574 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:04,575 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-07_02-19-04.log] [testng] 02:19:04,575 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d2268eb - End of configuration. [testng] [2024-10-07 02:19:05,071] [pool-1-thread-9] Initializing /data/ascb/U8092001.tif: [testng] 02:19:05,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:19:05,071 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:05,072 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-07_02-19-05.log] [testng] 02:19:05,072 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75a971aa - End of configuration. [testng] [2024-10-07 02:19:06,400] [pool-1-thread-8] Initializing /data/ascb/DP1190.tif: [testng] 02:19:06,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:19:06,400 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:06,401 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-07_02-19-06.log] [testng] 02:19:06,401 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e86532b - End of configuration. [testng] [2024-10-07 02:19:07,777] [pool-1-thread-7] Initializing /data/ascb/3/PT118001.hdr: [testng] 02:19:07,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:19:07,778 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:07,778 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-07_02-19-07.log] [testng] 02:19:07,779 |-INFO in ch.qos.logback.core.sift.SiftProcessor@ff52a84 - End of configuration. [testng] [2024-10-07 02:19:08,465] [pool-1-thread-6] Initializing /data/ascb/U8092001.hdr: [testng] 02:19:08,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:19:08,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:08,467 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-07_02-19-08.log] [testng] 02:19:08,467 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6c759593 - End of configuration. [testng] [2024-10-07 02:19:09,031] [pool-1-thread-5] Initializing /data/ascb/DP1190.hdr: [testng] 02:19:09,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:19:09,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:09,032 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-07_02-19-09.log] [testng] 02:19:09,032 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7fecdea - End of configuration. [testng] [2024-10-07 02:19:09,717] [pool-1-thread-4] Initializing /data/ascb/Y7616001.tif: [testng] 02:19:09,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:19:09,717 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:09,718 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-07_02-19-09.log] [testng] 02:19:09,718 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d0ae70e - End of configuration. [testng] [2024-10-07 02:19:10,992] [pool-1-thread-3] Initializing /data/ascb/2/V8701001.hdr: [testng] 02:19:10,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:19:10,993 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:10,993 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-07_02-19-10.log] [testng] 02:19:10,994 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33398132 - End of configuration. [testng] [2024-10-07 02:19:11,548] [pool-1-thread-2] Initializing /data/ascb/PT1173A001.tif: [testng] 02:19:11,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:19:11,548 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:19:11,549 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-07_02-19-11.log] [testng] 02:19:11,549 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d3757f3 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 583, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 1 second Finished: SUCCESS