![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 212 originally caused by: Started by upstream project "Trigger" build number 238 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins13138513510733260523.sh + '[' picoquant = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_33670_merge_ci -v /uod/idr/repos/curated/picoquant:/data -v /uod/idr-scratch/merge-ci/curated/picoquant:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:22:18,185 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:22:18,411 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:22:18,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:22:18,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:22:18,529 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:22:18,529 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:22:18,530 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:22:18,530 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:22:18,530 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@5c30a9b0 - End of configuration. [testng] 02:22:18,531 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@7a69b07 - Registering current configuration as safe fallback point [testng] 02:22:18,531 |-INFO in ch.qos.logback.classic.util.ContextInitializer@5e82df6a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 1254 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-07 02:22:18,543] [main] java.version = 1.8.0_342 [testng] 02:22:18,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:22:18,547 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:22:18,643 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-07_02-22-18.log] [testng] 02:22:18,645 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-10-07 02:22:18,647] [main] testng.directory = /data [testng] [2024-10-07 02:22:18,648] [main] testng.configDirectory = /config [testng] [2024-10-07 02:22:18,736] [main] testng.multiplier = 1.0 [testng] [2024-10-07 02:22:18,736] [main] testng.in-memory = false [testng] [2024-10-07 02:22:18,737] [main] testng.allow-missing = false [testng] [2024-10-07 02:22:18,737] [main] user.language = fr [testng] [2024-10-07 02:22:18,737] [main] user.country = FR [testng] [2024-10-07 02:22:18,737] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-07 02:22:22,182] [main] ---------------------------------------- [testng] [2024-10-07 02:22:22,183] [main] Total files: 8 [testng] [2024-10-07 02:22:22,183] [main] Scan time: 3.445 s (430 ms/file) [testng] [2024-10-07 02:22:22,183] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 8 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-07 02:22:24,981] [pool-1-thread-1] Initializing /data/neil/PollenGrainsSymPhoTime.png: [testng] 02:22:24,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:22:24,981 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:22:24,982 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-07_02-22-24.log] [testng] 02:22:24,983 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ef1e337 - End of configuration. [testng] [2024-10-07 02:22:25,009] [pool-1-thread-8] Initializing /data/qa-9505/CENP-labelled_cells_for_FRET.bin: [testng] 02:22:25,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:22:25,009 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:22:25,010 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-07_02-22-25.log] [testng] 02:22:25,010 |-INFO in ch.qos.logback.core.sift.SiftProcessor@e1ba1ff - End of configuration. [testng] [2024-10-07 02:22:25,353] [pool-1-thread-7] Initializing /data/qa-9434/DaisyPollen.bin: [testng] 02:22:25,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:22:25,354 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:22:25,355 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-07_02-22-25.log] [testng] 02:22:25,355 |-INFO in ch.qos.logback.core.sift.SiftProcessor@68b752e4 - End of configuration. [testng] [2024-10-07 02:22:25,816] [pool-1-thread-6] Initializing /data/qa-17095/IRF_256.bin: [testng] 02:22:25,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:22:25,816 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:22:25,817 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-07_02-22-25.log] [testng] 02:22:25,818 |-INFO in ch.qos.logback.core.sift.SiftProcessor@454507c4 - End of configuration. [testng] [2024-10-07 02:22:26,483] [pool-1-thread-5] Initializing /data/qa-17134/VLDLR_mGFP_with_ligand.bin: [testng] 02:22:26,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:22:26,483 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:22:26,484 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-07_02-22-26.log] [testng] 02:22:26,484 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2df94958 - End of configuration. [testng] [2024-10-07 02:22:27,364] [pool-1-thread-4] Initializing /data/neil/PollenGrains.bmp: [testng] 02:22:27,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:22:27,365 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:22:27,366 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-07_02-22-27.log] [testng] 02:22:27,367 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33e7ffb8 - End of configuration. [testng] [2024-10-07 02:22:27,536] [pool-1-thread-3] Initializing /data/neil/PollenGrains.bin: [testng] 02:22:27,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:22:27,537 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:22:27,537 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-07_02-22-27.log] [testng] 02:22:27,538 |-INFO in ch.qos.logback.core.sift.SiftProcessor@205ca225 - End of configuration. [testng] [2024-10-07 02:22:28,124] [pool-1-thread-2] Initializing /data/qa-9505/GFP_and_mRFP_FRET.bin: [testng] 02:22:28,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:22:28,124 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:22:28,125 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-07_02-22-28.log] [testng] 02:22:28,125 |-INFO in ch.qos.logback.core.sift.SiftProcessor@777111c7 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 424, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 31 seconds Finished: SUCCESS