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Started by upstream project "BIOFORMATS-test-repo" build number 213 originally caused by: Started by upstream project "Trigger" build number 240 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@9 [BIOFORMATS-test-folder@9] $ /bin/bash -xe /tmp/jenkins16297719375986762775.sh + '[' hamamatsu-vms = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_33795_merge_ci -v /uod/idr/repos/curated/hamamatsu-vms:/data -v /uod/idr-scratch/merge-ci/curated/hamamatsu-vms:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 06:22:00,764 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 06:22:00,790 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 06:22:00,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 06:22:00,814 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 06:22:00,820 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 06:22:00,820 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 06:22:00,820 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 06:22:00,820 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 06:22:00,821 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@6340e5f0 - End of configuration. [testng] 06:22:00,822 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@1c7696c6 - Registering current configuration as safe fallback point [testng] 06:22:00,822 |-INFO in ch.qos.logback.classic.util.ContextInitializer@60099951 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 403 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-08 06:22:00,832] [main] java.version = 11.0.16 [testng] 06:22:00,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 06:22:00,835 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:22:00,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-08_06-22-00.log] [testng] 06:22:00,883 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-08 06:22:00,885] [main] testng.directory = /data [testng] [2024-10-08 06:22:00,885] [main] testng.configDirectory = /config [testng] [2024-10-08 06:22:00,896] [main] testng.multiplier = 1.0 [testng] [2024-10-08 06:22:00,991] [main] testng.in-memory = false [testng] [2024-10-08 06:22:00,991] [main] testng.allow-missing = false [testng] [2024-10-08 06:22:00,991] [main] user.language = en [testng] [2024-10-08 06:22:00,991] [main] user.country = ${user.country} [testng] [2024-10-08 06:22:00,992] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-08 06:22:03,007] [main] ---------------------------------------- [testng] [2024-10-08 06:22:03,007] [main] Total files: 4 [testng] [2024-10-08 06:22:03,007] [main] Scan time: 2.015 s (503 ms/file) [testng] [2024-10-08 06:22:03,008] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 3 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-08 06:22:04,915] [pool-1-thread-1] Initializing /data/public/openslide/CMU-3/CMU-3-40x - 2010-01-12 13.57.09.vms: [testng] 06:22:04,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 06:22:04,916 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:22:04,918 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-08_06-22-04.log] [testng] 06:22:04,918 |-INFO in ch.qos.logback.core.sift.SiftProcessor@35332ac4 - End of configuration. [testng] [2024-10-08 06:22:05,799] [pool-1-thread-3] Initializing /data/public/openslide/CMU-1/CMU-1-40x - 2010-01-12 13.24.05.vms: [testng] 06:22:05,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 06:22:05,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:22:05,801 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-08_06-22-05.log] [testng] 06:22:05,801 |-INFO in ch.qos.logback.core.sift.SiftProcessor@604c2618 - End of configuration. [testng] [2024-10-08 06:22:06,331] [pool-1-thread-2] Initializing /data/public/openslide/CMU-2/CMU-2-40x - 2010-01-12 13.38.58.vms: [testng] 06:22:06,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 06:22:06,332 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:22:06,335 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-08_06-22-06.log] [testng] 06:22:06,335 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a6c0258 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 159, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 49 seconds Finished: SUCCESS