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Started by upstream project "BIOFORMATS-test-repo" build number 214 originally caused by: Started by upstream project "Trigger" build number 241 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins1506110506434336231.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_33940_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 08:43:45,740 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 08:43:45,742 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 08:43:45,742 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 08:43:45,743 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 08:43:45,744 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 08:43:45,744 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 08:43:45,744 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 08:43:45,744 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 08:43:45,745 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 08:43:45,746 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 08:43:45,746 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 08:43:45,746 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 08:43:45,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 08:43:45,925 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 08:43:45,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 08:43:45,947 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 08:43:45,953 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 08:43:45,953 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 08:43:45,953 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 08:43:45,953 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 08:43:45,954 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 08:43:45,954 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 08:43:45,954 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 209 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-08 08:43:45,963] [main] java.version = 11.0.16 [testng] 08:43:45,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 08:43:45,966 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:43:46,012 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-08_08-43-45.log] [testng] 08:43:46,013 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-08 08:43:46,015] [main] testng.directory = /data [testng] [2024-10-08 08:43:46,015] [main] testng.configDirectory = /config [testng] [2024-10-08 08:43:46,025] [main] testng.multiplier = 1.0 [testng] [2024-10-08 08:43:46,026] [main] testng.in-memory = false [testng] [2024-10-08 08:43:46,026] [main] testng.allow-missing = false [testng] [2024-10-08 08:43:46,026] [main] user.language = en [testng] [2024-10-08 08:43:46,026] [main] user.country = ${user.country} [testng] [2024-10-08 08:43:46,027] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-08 08:44:39,717] [main] ---------------------------------------- [testng] [2024-10-08 08:44:39,717] [main] Total files: 4426 [testng] [2024-10-08 08:44:39,717] [main] Scan time: 53.69 s (12 ms/file) [testng] [2024-10-08 08:44:39,717] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-08 09:02:49,209] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] 09:02:49,210 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 09:02:49,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:49,213 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-08_09-02-49.log] [testng] 09:02:49,213 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4557e3c4 - End of configuration. [testng] [2024-10-08 09:02:50,265] [pool-1-thread-12] Initializing /data/misc/wtembryo.tiff: [testng] 09:02:50,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 09:02:50,266 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:50,266 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-08_09-02-50.log] [testng] 09:02:50,267 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1fff048b - End of configuration. [testng] [2024-10-08 09:02:51,409] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] 09:02:51,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 09:02:51,409 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:51,410 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-08_09-02-51.log] [testng] 09:02:51,410 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5ddbdd3b - End of configuration. [testng] [2024-10-08 09:02:52,257] [pool-1-thread-10] Initializing /data/brian/Alx-488-pk.tif: [testng] 09:02:52,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 09:02:52,257 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:52,258 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-08_09-02-52.log] [testng] 09:02:52,258 |-INFO in ch.qos.logback.core.sift.SiftProcessor@145aa762 - End of configuration. [testng] [2024-10-08 09:02:53,262] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] 09:02:53,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 09:02:53,262 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:53,263 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-08_09-02-53.log] [testng] 09:02:53,263 |-INFO in ch.qos.logback.core.sift.SiftProcessor@47ee32b0 - End of configuration. [testng] [2024-10-08 09:02:54,242] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] 09:02:54,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 09:02:54,242 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:54,243 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-08_09-02-54.log] [testng] 09:02:54,243 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b634c5f - End of configuration. [testng] [2024-10-08 09:02:55,031] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] 09:02:55,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 09:02:55,031 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:55,032 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-08_09-02-55.log] [testng] 09:02:55,032 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4ff00023 - End of configuration. [testng] [2024-10-08 09:02:57,613] [pool-1-thread-6] Initializing /data/public/libtiff/oxford.tif: [testng] 09:02:57,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 09:02:57,613 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:57,614 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-08_09-02-57.log] [testng] 09:02:57,614 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7647680f - End of configuration. [testng] [2024-10-08 09:02:58,291] [pool-1-thread-5] Initializing /data/brian/Ch1_fld1.tif: [testng] 09:02:58,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 09:02:58,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:58,292 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-08_09-02-58.log] [testng] 09:02:58,292 |-INFO in ch.qos.logback.core.sift.SiftProcessor@535e0559 - End of configuration. [testng] [2024-10-08 09:02:58,893] [pool-1-thread-4] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] 09:02:58,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 09:02:58,893 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:58,894 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-08_09-02-58.log] [testng] 09:02:58,894 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6b772d1b - End of configuration. [testng] [2024-10-08 09:02:59,475] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] 09:02:59,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 09:02:59,475 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:02:59,476 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-08_09-02-59.log] [testng] 09:02:59,476 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d914753 - End of configuration. [testng] [2024-10-08 09:03:00,238] [pool-1-thread-2] Initializing /data/jae/first image.tif: [testng] 09:03:00,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 09:03:00,238 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 09:03:00,239 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-08_09-03-00.log] [testng] 09:03:00,240 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e19a9c1 - End of configuration. [testng] [2024-10-08 09:03:07,688] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-10-08 09:03:08,492] [pool-1-thread-2] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-10-08 09:03:09,605] [pool-1-thread-11] Initializing /data/josiah/cell-Z10.C0.tiff: [testng] [2024-10-08 09:03:10,389] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-10-08 09:03:11,004] [pool-1-thread-3] Initializing /data/josiah/cell-Z6.C1.tiff: [testng] [2024-10-08 09:03:11,684] [pool-1-thread-10] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-10-08 09:03:12,404] [pool-1-thread-6] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-10-08 09:03:12,941] [pool-1-thread-12] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-10-08 09:03:13,523] [pool-1-thread-4] Initializing /data/big-images/2kx2k.tif: [testng] [2024-10-08 09:03:14,454] [pool-1-thread-9] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-10-08 09:03:24,807] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern7.tif: [testng] [2024-10-08 09:03:25,986] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-10-08 09:03:28,133] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-10-08 09:03:29,599] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-10-08 09:03:31,243] [pool-1-thread-12] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-10-08 09:03:32,757] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-10-08 09:03:34,673] [pool-1-thread-9] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-10-08 09:03:35,757] [pool-1-thread-8] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-10-08 09:03:37,416] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-10-08 09:03:39,253] [pool-1-thread-4] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-10-08 09:03:44,797] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-10-08 09:03:51,236] [pool-1-thread-5] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-10-08 09:03:53,705] [pool-1-thread-2] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-10-08 09:03:55,724] [pool-1-thread-3] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-10-08 09:03:57,567] [pool-1-thread-10] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-10-08 09:03:59,414] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-10-08 09:04:00,808] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-10-08 09:04:02,455] [pool-1-thread-12] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-10-08 09:04:04,012] [pool-1-thread-11] Initializing /data/tom/TLD - n000000_Stamp.tif: [testng] [2024-10-08 09:04:05,309] [pool-1-thread-8] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-10-08 09:04:07,110] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-10-08 09:04:08,345] [pool-1-thread-9] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-10-08 09:04:12,337] [pool-1-thread-7] Initializing /data/public/condensation/B12.pattern2.tif: [testng] [2024-10-08 09:04:18,449] [pool-1-thread-5] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-10-08 09:04:25,651] [pool-1-thread-6] Initializing /data/tamjid/Image_843.tif: [testng] [2024-10-08 09:04:27,872] [pool-1-thread-4] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-10-08 09:04:31,162] [pool-1-thread-10] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-10-08 09:04:32,798] [pool-1-thread-1] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-10-08 09:04:34,298] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-10-08 09:04:35,536] [pool-1-thread-8] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-10-08 09:04:36,881] [pool-1-thread-2] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-10-08 09:04:38,177] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-10-08 09:04:39,764] [pool-1-thread-9] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-10-08 09:04:41,310] [pool-1-thread-12] Initializing /data/damian/36m.tiff: [testng] [2024-10-08 09:04:42,891] [pool-1-thread-7] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-10-08 09:04:50,386] [pool-1-thread-5] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-10-08 09:04:55,621] [pool-1-thread-3] Initializing 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09:16:01,268] [pool-1-thread-8] Initializing /data/misc/mri-new.mov: [testng] [2024-10-08 09:16:02,438] [pool-1-thread-10] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-10-08 09:16:03,648] [pool-1-thread-8] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-10-08 09:16:04,786] [pool-1-thread-7] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-10-08 09:16:05,318] [pool-1-thread-9] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-10-08 09:16:05,900] [pool-1-thread-5] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-10-08 09:16:06,327] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-10-08 09:16:07,417] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] [2024-10-08 09:16:08,273] [pool-1-thread-1] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-10-08 09:16:08,777] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-10-08 09:16:09,548] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-10-08 09:16:14,704] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-10-08 09:16:15,275] [pool-1-thread-3] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-10-08 09:16:15,980] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-10-08 09:16:16,504] [pool-1-thread-12] Initializing /data/misc/mri-old.mov: [testng] [2024-10-08 09:16:16,580] [pool-1-thread-7] Initializing /data/ascb/14346-myc-p125A.tif: [testng] [2024-10-08 09:16:16,927] [pool-1-thread-5] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-10-08 09:16:17,273] [pool-1-thread-1] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-10-08 09:16:17,616] [pool-1-thread-9] Initializing /data/kevino/_BF_00003.tif: [testng] [2024-10-08 09:16:17,971] [pool-1-thread-2] Initializing 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[testng] [2024-10-08 09:16:28,423] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-10-08 09:16:28,772] [pool-1-thread-4] Initializing /data/ascb/bad/FND-19_FawcettPhillipsSuccessive_4800.tif: [testng] [2024-10-08 09:16:29,120] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z036.tif: [testng] [2024-10-08 09:16:30,049] [pool-1-thread-12] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-10-08 09:16:34,771] [pool-1-thread-8] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-10-08 09:16:35,931] [pool-1-thread-6] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-10-08 09:16:37,848] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-10-08 09:16:38,453] [pool-1-thread-9] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-10-08 09:16:39,024] [pool-1-thread-2] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-10-08 09:16:39,407] [pool-1-thread-5] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-10-08 09:16:39,801] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-10-08 09:16:40,925] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] [2024-10-08 09:16:44,992] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-10-08 09:16:45,617] [pool-1-thread-8] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-10-08 09:16:47,846] [pool-1-thread-1] Initializing /data/brian/PlantCell/PlantCell_C1_Z032.tif: [testng] [2024-10-08 09:16:48,406] [pool-1-thread-5] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-10-08 09:16:48,915] [pool-1-thread-9] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-10-08 09:16:49,370] [pool-1-thread-3] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-10-08 09:16:49,818] [pool-1-thread-2] Initializing /data/misc/ms-paint.png: [testng] [2024-10-08 09:16:49,835] [pool-1-thread-11] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-10-08 09:16:50,349] [pool-1-thread-4] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-10-08 09:16:50,818] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-10-08 09:16:51,292] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z032.tif: [testng] [2024-10-08 09:16:52,859] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-10-08 09:16:54,363] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z024.tif: [testng] [2024-10-08 09:16:57,370] [pool-1-thread-7] Initializing /data/chris-lesiak/half-float.tiff: [testng] [2024-10-08 09:16:57,900] [pool-1-thread-9] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-10-08 09:16:58,536] [pool-1-thread-5] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-10-08 09:16:59,069] [pool-1-thread-3] Initializing /data/josh/stack.tif: [testng] [2024-10-08 09:16:59,530] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-10-08 09:16:59,963] [pool-1-thread-1] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] [2024-10-08 09:17:00,298] [pool-1-thread-11] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-10-08 09:17:00,753] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-10-08 09:17:01,308] [pool-1-thread-2] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-10-08 09:17:04,264] [pool-1-thread-12] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-10-08 09:17:04,941] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-10-08 09:17:06,682] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z045.tif: [testng] [2024-10-08 09:17:07,344] [pool-1-thread-9] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-10-08 09:17:08,057] [pool-1-thread-5] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-10-08 09:17:08,679] [pool-1-thread-4] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-10-08 09:17:09,066] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-10-08 09:17:09,473] [pool-1-thread-10] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-10-08 09:17:10,053] [pool-1-thread-3] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-10-08 09:17:10,550] [pool-1-thread-11] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-10-08 09:17:16,267] [pool-1-thread-2] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-10-08 09:17:19,228] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-10-08 09:17:20,371] [pool-1-thread-1] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-10-08 09:17:20,955] [pool-1-thread-6] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-10-08 09:17:21,497] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-10-08 09:17:22,135] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-10-08 09:17:22,482] [pool-1-thread-5] Initializing /data/carolyn/tumor_4.tif: [testng] [2024-10-08 09:17:22,852] [pool-1-thread-4] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-10-08 09:17:23,814] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-10-08 09:17:24,290] [pool-1-thread-9] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-10-08 09:17:24,963] [pool-1-thread-3] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-10-08 09:17:25,330] [pool-1-thread-2] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-10-08 09:17:29,070] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x32.tiff: [testng] [2024-10-08 09:17:29,736] [pool-1-thread-8] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-10-08 09:17:30,387] [pool-1-thread-4] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] [2024-10-08 09:17:30,903] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-10-08 09:17:31,258] [pool-1-thread-7] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-10-08 09:17:31,712] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-10-08 09:17:32,045] [pool-1-thread-10] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-10-08 09:17:32,423] [pool-1-thread-2] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-10-08 09:17:32,835] [pool-1-thread-9] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-10-08 09:17:33,194] [pool-1-thread-6] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-10-08 09:17:36,983] [pool-1-thread-12] Initializing /data/public/condensation/E4.pattern6.tif: [testng] [2024-10-08 09:17:38,549] [pool-1-thread-1] Initializing /data/damian/damian.tif: [testng] [2024-10-08 09:17:38,903] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-10-08 09:17:39,199] [pool-1-thread-5] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-10-08 09:17:39,490] [pool-1-thread-8] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-10-08 09:17:39,808] [pool-1-thread-4] Initializing /data/ascb/FND-24_GeorgeEPalade.tif: [testng] [2024-10-08 09:17:40,089] [pool-1-thread-6] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-10-08 09:17:40,403] [pool-1-thread-3] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-10-08 09:17:43,914] [pool-1-thread-12] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-10-08 09:17:45,033] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-10-08 09:17:45,680] [pool-1-thread-5] Initializing /data/brian/datamanager.tiff: [testng] [2024-10-08 09:17:46,277] [pool-1-thread-1] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [2024-10-08 09:17:46,759] [pool-1-thread-6] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-10-08 09:17:47,254] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 34 minutes 12 seconds Finished: SUCCESS