Skip to content

Console Output

Started by upstream project "BIOFORMATS-test-repo" build number 214
originally caused by:
 Started by upstream project "Trigger" build number 241
 originally caused by:
  Started by user devspace
Running as SYSTEM
Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7
[BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins4801731882524141435.sh
+ '[' svs = slidebook ']'
++ date +%u
+ '[' 2 -le 1 ']'
+ sudo docker run --rm --name BIOFORMATS-test-folder_34011_merge_ci -v /uod/idr/repos/curated/svs:/data -v /uod/idr-scratch/merge-ci/curated/svs:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12
Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml
     [echo] isSnapshot = true

init-title:
     [echo] ----------=========== bio-formats-testing-framework ===========----------

init-timestamp:

init:

copy-resources:

compile:
[resolver:resolve] Resolving artifacts

compile-tests:
[resolver:resolve] Resolving artifacts
    [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test
    [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
    [javac] 1 warning

test-automated:
   [testng] WARNING: An illegal reflective access operation has occurred
   [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket
   [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener
   [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations
   [testng] WARNING: All illegal access operations will be denied in a future release
   [testng] File leak detector installed
   [testng] 10:17:41,625 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14
   [testng] 10:17:41,627 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service.
   [testng] 10:17:41,627 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 10:17:41,628 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator
   [testng] 10:17:41,629 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo]
   [testng] 10:17:41,629 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo]
   [testng] 10:17:41,629 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY
   [testng] 10:17:41,629 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 10:17:41,630 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator
   [testng] 10:17:41,631 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}]
   [testng] 10:17:41,631 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
   [testng] 10:17:41,631 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml]
   [testng] 10:17:41,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout]
   [testng] 10:17:41,800 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
   [testng] 10:17:41,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT]
   [testng] 10:17:41,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender]
   [testng] 10:17:41,827 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG
   [testng] 10:17:41,827 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO
   [testng] 10:17:41,827 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT]
   [testng] 10:17:41,828 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng]
   [testng] 10:17:41,828 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration.
   [testng] 10:17:41,828 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point
   [testng] 10:17:41,829 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 199 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY
   [testng] [2024-10-08 10:17:41,837] [main] java.version = 11.0.16
   [testng] 10:17:41,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main]
   [testng] 10:17:41,840 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:17:41,882 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-08_10-17-41.log]
   [testng] 10:17:41,884 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration.
   [testng] [2024-10-08 10:17:41,886] [main] testng.directory = /data
   [testng] [2024-10-08 10:17:41,886] [main] testng.configDirectory = /config
   [testng] [2024-10-08 10:17:41,896] [main] testng.multiplier = 1.0
   [testng] [2024-10-08 10:17:41,897] [main] testng.in-memory = false
   [testng] [2024-10-08 10:17:41,897] [main] testng.allow-missing = false
   [testng] [2024-10-08 10:17:41,898] [main] user.language = en
   [testng] [2024-10-08 10:17:41,898] [main] user.country = ${user.country}
   [testng] [2024-10-08 10:17:41,898] [main] Maximum heap size = 15360 MB
   [testng] Scanning for files...
   [testng] [2024-10-08 10:18:04,098] [main] ----------------------------------------
   [testng] [2024-10-08 10:18:04,098] [main] Total files: 119
   [testng] [2024-10-08 10:18:04,099] [main] Scan time: 22.2 s (186 ms/file)
   [testng] [2024-10-08 10:18:04,099] [main] ----------------------------------------
   [testng] Building list of tests...
   [testng] Ready to test 110 files
   [testng] [TestNG] Running:
   [testng]   Bio-Formats software test suite
   [testng] 
   [testng] [2024-10-08 10:19:11,519] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss42.jpg: 
   [testng] 10:19:11,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1]
   [testng] 10:19:11,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:11,522 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-08_10-19-11.log]
   [testng] 10:19:11,522 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3daabe68 - End of configuration.
   [testng] [2024-10-08 10:19:11,656] [pool-1-thread-12] Initializing /data/toby/test01_singleCore_cws/Ss9.jpg: 
   [testng] 10:19:11,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12]
   [testng] 10:19:11,656 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:11,657 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-08_10-19-11.log]
   [testng] 10:19:11,657 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41e0ccbf - End of configuration.
   [testng] [2024-10-08 10:19:11,810] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss5.jpg: 
   [testng] 10:19:11,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11]
   [testng] 10:19:11,810 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:11,811 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-08_10-19-11.log]
   [testng] 10:19:11,811 |-INFO in ch.qos.logback.core.sift.SiftProcessor@25487689 - End of configuration.
   [testng] [2024-10-08 10:19:11,963] [pool-1-thread-10] Initializing /data/david/2316.svs: 
   [testng] 10:19:11,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10]
   [testng] 10:19:11,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:11,964 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-08_10-19-11.log]
   [testng] 10:19:11,964 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7980fa1e - End of configuration.
   [testng] [2024-10-08 10:19:12,662] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_cws/Ss34.jpg: 
   [testng] 10:19:12,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9]
   [testng] 10:19:12,662 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:12,662 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-08_10-19-12.log]
   [testng] 10:19:12,663 |-INFO in ch.qos.logback.core.sift.SiftProcessor@63c5aba3 - End of configuration.
   [testng] [2024-10-08 10:19:12,811] [pool-1-thread-8] Initializing /data/qa-17150/450CD3_2016-04-12.tif: 
   [testng] 10:19:12,812 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8]
   [testng] 10:19:12,812 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:12,812 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-08_10-19-12.log]
   [testng] 10:19:12,812 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13d3c37 - End of configuration.
   [testng] [2024-10-08 10:19:13,520] [pool-1-thread-7] Initializing /data/karen/261.svs: 
   [testng] 10:19:13,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7]
   [testng] 10:19:13,520 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:13,521 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-08_10-19-13.log]
   [testng] 10:19:13,521 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3b8a4336 - End of configuration.
   [testng] [2024-10-08 10:19:14,236] [pool-1-thread-6] Initializing /data/toby/test01_singleCore_cws/Ss18.jpg: 
   [testng] 10:19:14,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6]
   [testng] 10:19:14,236 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:14,237 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-08_10-19-14.log]
   [testng] 10:19:14,237 |-INFO in ch.qos.logback.core.sift.SiftProcessor@43b3c5b3 - End of configuration.
   [testng] [2024-10-08 10:19:14,360] [pool-1-thread-5] Initializing /data/public/77928.svs: 
   [testng] 10:19:14,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5]
   [testng] 10:19:14,360 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:14,361 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-08_10-19-14.log]
   [testng] 10:19:14,361 |-INFO in ch.qos.logback.core.sift.SiftProcessor@dab3b44 - End of configuration.
   [testng] [2024-10-08 10:19:15,102] [pool-1-thread-4] Initializing /data/jason/ColCan slide 1.svs: 
   [testng] 10:19:15,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4]
   [testng] 10:19:15,102 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:15,103 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-08_10-19-15.log]
   [testng] 10:19:15,103 |-INFO in ch.qos.logback.core.sift.SiftProcessor@aa1fb78 - End of configuration.
   [testng] [2024-10-08 10:19:15,968] [pool-1-thread-3] Initializing /data/alexandra/UMD001_ORO.svs: 
   [testng] 10:19:15,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3]
   [testng] 10:19:15,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:15,969 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-08_10-19-15.log]
   [testng] 10:19:15,969 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78b22510 - End of configuration.
   [testng] [2024-10-08 10:19:16,715] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss27.jpg: 
   [testng] 10:19:16,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2]
   [testng] 10:19:16,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender]
   [testng] 10:19:16,716 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-08_10-19-16.log]
   [testng] 10:19:16,716 |-INFO in ch.qos.logback.core.sift.SiftProcessor@26c19545 - End of configuration.
   [testng] [2024-10-08 10:19:21,752] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss13.jpg: 
   [testng] [2024-10-08 10:19:21,914] [pool-1-thread-6] Initializing /data/toby/test01_singleCore_cws/PreviewSlide.jpg: 
   [testng] [2024-10-08 10:19:22,057] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_cws/Ss54.jpg: 
   [testng] [2024-10-08 10:19:22,235] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss50.jpg: 
   [testng] [2024-10-08 10:19:22,392] [pool-1-thread-12] Initializing /data/toby/test01_singleCore_cws/Ss41.jpg: 
   [testng] [2024-10-08 10:19:22,550] [pool-1-thread-11] Initializing /data/imagesc-61404/1001.svs: 
   [testng] [2024-10-08 10:19:27,194] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_cws/Ss30.jpg: 
   [testng] [2024-10-08 10:19:27,387] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss40.jpg: 
   [testng] [2024-10-08 10:19:27,597] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss1.jpg: 
   [testng] [2024-10-08 10:19:27,766] [pool-1-thread-12] Initializing /data/jeff/5794_001.svs: 
   [testng] [2024-10-08 10:19:28,506] [pool-1-thread-6] Initializing /data/gh-3757/65141.svs: 
   [testng] [2024-10-08 10:19:30,666] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_cws/Ss4.jpg: 
   [testng] [2024-10-08 10:19:33,050] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss59.jpg: 
   [testng] [2024-10-08 10:19:33,217] [pool-1-thread-1] Initializing /data/yan/16722_001.svs: 
   [testng] [2024-10-08 10:19:34,009] [pool-1-thread-7] Initializing /data/helmut/Aperio_jpg2000_33003.svs: 
   [testng] [2024-10-08 10:19:34,725] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss52.jpg: 
   [testng] [2024-10-08 10:19:36,006] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_cws/Ss43.jpg: 
   [testng] [2024-10-08 10:19:36,342] [pool-1-thread-12] Initializing /data/karen/257_a.svs: 
   [testng] [2024-10-08 10:19:37,856] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_jpg.jpg: 
   [testng] [2024-10-08 10:19:38,753] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss19.jpg: 
   [testng] [2024-10-08 10:19:39,705] [pool-1-thread-9] Initializing /data/toby/9_0_22_test01.svs: 
   [testng] [2024-10-08 10:19:41,726] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss2.jpg: 
   [testng] [2024-10-08 10:19:42,330] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss10.jpg: 
   [testng] [2024-10-08 10:19:43,655] [pool-1-thread-1] Initializing /data/yan/082_flr.svs: 
   [testng] [2024-10-08 10:19:45,977] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss15.jpg: 
   [testng] [2024-10-08 10:19:46,129] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_jpg2000.svs: 
   [testng] [2024-10-08 10:19:48,035] [pool-1-thread-7] Initializing /data/toby/test01_singleCore_cws/Ss39.jpg: 
   [testng] [2024-10-08 10:19:48,883] [pool-1-thread-10] Initializing /data/bolek/6jp2.svs: 
   [testng] [2024-10-08 10:19:50,127] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss16.jpg: 
   [testng] [2024-10-08 10:19:50,982] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss35.jpg: 
   [testng] [2024-10-08 10:19:51,354] [pool-1-thread-5] Initializing /data/toby/test01_singleCore_cws/Ss17.jpg: 
   [testng] [2024-10-08 10:19:51,906] [pool-1-thread-7] Initializing /data/options/remove_thumbnail/CMU-1.svs: 
   [testng] [2024-10-08 10:19:54,012] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_TIFF.tif: 
   [testng] [2024-10-08 10:19:55,063] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss48.jpg: 
   [testng] [2024-10-08 10:19:55,491] [pool-1-thread-5] Initializing /data/david/2310_a.svs: 
   [testng] [2024-10-08 10:19:56,445] [pool-1-thread-4] Initializing /data/jason/50114.svs: 
   [testng] [2024-10-08 10:19:58,445] [pool-1-thread-12] Initializing /data/toby/test01_singleCore_cws/Ss6.jpg: 
   [testng] [2024-10-08 10:19:58,611] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss33.jpg: 
   [testng] [2024-10-08 10:20:00,829] [pool-1-thread-6] Initializing /data/toby/test01_singleCore_cws/SlideLabel.jpg: 
   [testng] [2024-10-08 10:20:01,700] [pool-1-thread-12] Initializing /data/toby/test01_singleCore_cws/Ss56.jpg: 
   [testng] [2024-10-08 10:20:02,045] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss57.jpg: 
   [testng] [2024-10-08 10:20:03,898] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss47.jpg: 
   [testng] [2024-10-08 10:20:04,472] [pool-1-thread-6] Initializing /data/samples/sanitized/CMU-1.svs: 
   [testng] [2024-10-08 10:20:05,264] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss26.jpg: 
   [testng] [2024-10-08 10:20:06,037] [pool-1-thread-12] Initializing /data/toby/test01_singleCore_cws/Ss14.jpg: 
   [testng] [2024-10-08 10:20:06,252] [pool-1-thread-11] Initializing /data/converted/z-stack/PHAS 01.svs: 
   [testng] [2024-10-08 10:20:08,473] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss44.jpg: 
   [testng] [2024-10-08 10:20:09,053] [pool-1-thread-2] Initializing /data/toby/test01_singleCore_cws/Ss8.jpg: 
   [testng] [2024-10-08 10:20:10,414] [pool-1-thread-8] Initializing /data/samples/BreastCancer.svs: 
   [testng] [2024-10-08 10:20:11,305] [pool-1-thread-12] Initializing /data/toby/test01_singleCore_YCC.svs: 
   [testng] [2024-10-08 10:20:12,642] [pool-1-thread-7] Initializing /data/david-smith/CMU-1.svs: 
   [testng] [2024-10-08 10:20:13,775] [pool-1-thread-3] Initializing /data/jason/77886.svs: 
   [testng] [2024-10-08 10:20:14,577] [pool-1-thread-2] Initializing /data/samples/Mammal Eye_001.svs: 
   [testng] [2024-10-08 10:20:17,288] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss37.jpg: 
   [testng] [2024-10-08 10:20:20,703] [pool-1-thread-8] Initializing /data/gh-3757/01ae6c82-106d-4854-8209-068998340113/TCGA-OR-A5K9-01Z-00-DX2.7C0DDEF6-8CCC-4640-820F-7703616E2FEF.svs: 
   [testng] [2024-10-08 10:20:21,590] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/Ss21.jpg: 
   [testng] [2024-10-08 10:20:22,254] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_cws/Ss53.jpg: 
   [testng] [2024-10-08 10:20:24,418] [pool-1-thread-12] Initializing /data/toby/test01_singleCore_cws/Ss55.jpg: 
   [testng] [2024-10-08 10:20:25,117] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/Ss38.jpg: 
   [testng] [2024-10-08 10:20:25,835] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_cws/Ss7.jpg: 
   [testng] [2024-10-08 10:20:27,539] [pool-1-thread-12] Initializing /data/toby/9_0_22_test02.svs: 
   [testng] [2024-10-08 10:20:28,787] [pool-1-thread-5] Initializing /data/public/77917.svs: 
   [testng] [2024-10-08 10:20:29,730] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/SlideMacro.jpg: 
   [testng] [2024-10-08 10:20:30,022] [pool-1-thread-6] Initializing /data/toby/test01_singleCore_cws/Ss20.jpg: 
   [testng] [2024-10-08 10:20:30,312] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_TIFFLZW.tif: 
   [testng] [2024-10-08 10:20:32,100] [pool-1-thread-7] Initializing /data/toby/test01_singleCore_cws/Ss60.jpg: 
   [testng] [2024-10-08 10:20:33,262] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/Ss45.jpg: 
   [testng] [2024-10-08 10:20:33,610] [pool-1-thread-6] Initializing /data/toby/test01_singleCore_cws/Ss25.jpg: 
   [testng] [2024-10-08 10:20:35,312] [pool-1-thread-7] Initializing /data/toby/test01_singleCore_jpg.svs: 
   [testng] [2024-10-08 10:20:36,063] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss32.jpg: 
   [testng] [2024-10-08 10:20:37,211] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss58.jpg: 
   [testng] [2024-10-08 10:20:37,595] [pool-1-thread-6] Initializing /data/toby/test01_large_jpg2000.svs: 
   [testng] [2024-10-08 10:20:38,371] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/Ss29.jpg: 
   [testng] [2024-10-08 10:20:38,553] [pool-1-thread-2] Initializing /data/david-smith/02.svs: 
   [testng] [2024-10-08 10:20:40,141] [pool-1-thread-3] Initializing /data/paul/83802.svs: 
   [testng] [2024-10-08 10:20:41,298] [pool-1-thread-8] Initializing /data/julien/crop_problem.svs: 
   [testng] [2024-10-08 10:20:42,148] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss11.jpg: 
   [testng] [2024-10-08 10:20:43,401] [pool-1-thread-4] Initializing /data/alexandra/UMD009_HE.svs: 
   [testng] [2024-10-08 10:20:45,427] [pool-1-thread-9] Initializing /data/toby/test01_singleCore_cws/Ss3.jpg: 
   [testng] [2024-10-08 10:20:45,799] [pool-1-thread-1] Initializing /data/harvey/93888.svs: 
   [testng] [2024-10-08 10:20:48,808] [pool-1-thread-9] Initializing /data/paul/83797.svs: 
   [testng] [2024-10-08 10:20:50,160] [pool-1-thread-7] Initializing /data/toby/test01_singleCore_cws/Ss24.jpg: 
   [testng] [2024-10-08 10:20:53,384] [pool-1-thread-7] Initializing /data/options/remove_thumbnail_single_image/CMU-1.svs: 
   [testng] [2024-10-08 10:20:55,136] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss28.jpg: 
   [testng] [2024-10-08 10:20:56,701] [pool-1-thread-11] Initializing /data/samples/sanitized/CMU-1-Small-Region.svs: 
   [testng] [2024-10-08 10:20:59,015] [pool-1-thread-8] Initializing /data/julien/image_jpeg2000.svs: 
   [testng] [2024-10-08 10:20:59,775] [pool-1-thread-5] Initializing /data/helmut/Comp_jpeg2000.svs: 
   [testng] [2024-10-08 10:21:03,674] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss46.jpg: 
   [testng] [2024-10-08 10:21:04,980] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss36.jpg: 
   [testng] [2024-10-08 10:21:06,617] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss49.jpg: 
   [testng] [2024-10-08 10:21:07,263] [pool-1-thread-3] Initializing /data/toby/test01_singleCore_cws/Ss12.jpg: 
   [testng] [2024-10-08 10:21:08,075] [pool-1-thread-9] Initializing /data/jason/77892.svs: 
   [testng] [2024-10-08 10:21:09,018] [pool-1-thread-11] Initializing /data/toby/test01_singleCore_cws/Ss22.jpg: 
   [testng] [2024-10-08 10:21:10,138] [pool-1-thread-1] Initializing /data/toby/test01_singleCore_cws/Ss51.jpg: 
   [testng] [2024-10-08 10:21:10,304] [pool-1-thread-8] Initializing /data/toby/test01_singleCore_cws/Ss23.jpg: 
   [testng] [2024-10-08 10:21:10,482] [pool-1-thread-3] Initializing /data/yan/2003-05-P8072-VVL2-stripe & stich.svs: 
   [testng] [2024-10-08 10:21:12,616] [pool-1-thread-11] Initializing /data/alexandra/UMD019_Tri.svs: 
   [testng] [2024-10-08 10:21:13,342] [pool-1-thread-4] Initializing /data/toby/test01_singleCore_cws/Ss31.jpg: 
   [testng] 
   [testng] ===============================================
   [testng] Bio-Formats software test suite
   [testng] Total tests run: 5830, Failures: 0, Skips: 0
   [testng] ===============================================
   [testng] 

BUILD SUCCESSFUL
Total time: 4 minutes 8 seconds
Finished: SUCCESS