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Started by upstream project "BIOFORMATS-test-repo" build number 215 originally caused by: Started by upstream project "Trigger" build number 242 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins2265872173929106669.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 3 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_34042_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:16,543 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:16,544 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 01:21:16,544 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:16,545 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:16,545 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:16,546 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:16,546 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:16,546 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:16,546 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:16,547 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:16,547 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:16,547 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:16,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:16,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:16,715 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:16,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:16,720 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:16,720 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:16,721 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:16,721 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:16,721 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 01:21:16,722 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 01:21:16,722 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 176 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-09 01:21:16,730] [main] java.version = 17.0.2 [testng] 01:21:16,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:16,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:16,771 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-09_01-21-16.log] [testng] 01:21:16,772 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-10-09 01:21:16,774] [main] testng.directory = /data [testng] [2024-10-09 01:21:16,774] [main] testng.configDirectory = /config [testng] [2024-10-09 01:21:16,782] [main] testng.multiplier = 1.0 [testng] [2024-10-09 01:21:16,782] [main] testng.in-memory = false [testng] [2024-10-09 01:21:16,783] [main] testng.allow-missing = false [testng] [2024-10-09 01:21:16,783] [main] user.language = en [testng] [2024-10-09 01:21:16,783] [main] user.country = ${user.country} [testng] [2024-10-09 01:21:16,783] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-09 01:21:21,236] [main] ---------------------------------------- [testng] [2024-10-09 01:21:21,236] [main] Total files: 103 [testng] [2024-10-09 01:21:21,236] [main] Scan time: 4.453 s (43 ms/file) [testng] [2024-10-09 01:21:21,236] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-09 01:21:41,436] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] 01:21:41,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:21:41,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:41,438 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-09_01-21-41.log] [testng] 01:21:41,438 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c76a064 - End of configuration. [testng] [2024-10-09 01:21:42,614] [pool-1-thread-12] Initializing /data/melissa/annotation-test.tif: [testng] 01:21:42,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:21:42,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:42,615 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-09_01-21-42.log] [testng] 01:21:42,616 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2bdda9ec - End of configuration. [testng] [2024-10-09 01:21:43,821] [pool-1-thread-11] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] 01:21:43,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:21:43,821 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,822 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-09_01-21-43.log] [testng] 01:21:43,822 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d840ec5 - End of configuration. [testng] [2024-10-09 01:21:43,971] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] 01:21:43,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:21:43,972 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:43,972 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-09_01-21-43.log] [testng] 01:21:43,973 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3f173377 - End of configuration. [testng] [2024-10-09 01:21:44,191] [pool-1-thread-9] Initializing /data/jay/dnasample1.dm3: [testng] 01:21:44,191 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:21:44,192 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:44,193 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-09_01-21-44.log] [testng] 01:21:44,193 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bf8f086 - End of configuration. [testng] [2024-10-09 01:21:44,397] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] 01:21:44,398 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:21:44,398 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:44,398 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-09_01-21-44.log] [testng] 01:21:44,399 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3c6d8b49 - End of configuration. [testng] [2024-10-09 01:21:45,762] [pool-1-thread-7] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] 01:21:45,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:21:45,762 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:45,763 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-09_01-21-45.log] [testng] 01:21:45,763 |-INFO in ch.qos.logback.core.sift.SiftProcessor@15d1621 - End of configuration. [testng] [2024-10-09 01:21:45,939] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] 01:21:45,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:21:45,940 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:45,940 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-09_01-21-45.log] [testng] 01:21:45,941 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1da02012 - End of configuration. [testng] [2024-10-09 01:21:46,188] [pool-1-thread-5] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] 01:21:46,188 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:21:46,189 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:46,189 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-09_01-21-46.log] [testng] 01:21:46,189 |-INFO in ch.qos.logback.core.sift.SiftProcessor@666d49aa - End of configuration. [testng] [2024-10-09 01:21:47,501] [pool-1-thread-4] Initializing /data/ofra/lowloss.dm3: [testng] 01:21:47,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:21:47,501 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:47,502 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-09_01-21-47.log] [testng] 01:21:47,502 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7499353d - End of configuration. [testng] [2024-10-09 01:21:47,683] [pool-1-thread-3] Initializing /data/jay/biosamplefullframe.dm3: [testng] 01:21:47,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:21:47,683 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:47,684 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-09_01-21-47.log] [testng] 01:21:47,684 |-INFO in ch.qos.logback.core.sift.SiftProcessor@37fa8409 - End of configuration. [testng] [2024-10-09 01:21:47,876] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] 01:21:47,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:21:47,876 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:47,877 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-09_01-21-47.log] [testng] 01:21:47,877 |-INFO in ch.qos.logback.core.sift.SiftProcessor@de27ca - End of configuration. [testng] [2024-10-09 01:21:51,989] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-09 01:21:53,900] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-10-09 01:21:54,141] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-10-09 01:21:54,315] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-10-09 01:21:54,485] [pool-1-thread-3] Initializing /data/jay/DMtest2.dm3: [testng] [2024-10-09 01:21:54,783] [pool-1-thread-9] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-10-09 01:21:55,885] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-10-09 01:21:59,618] [pool-1-thread-11] Initializing /data/jay/camtest1.dm3: [testng] [2024-10-09 01:22:00,968] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-10-09 01:22:01,163] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-10-09 01:22:01,379] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-10-09 01:22:02,610] [pool-1-thread-8] Initializing /data/jay/dnasample.tif: [testng] [2024-10-09 01:22:03,957] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-10-09 01:22:05,061] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-09 01:22:06,547] [pool-1-thread-7] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-10-09 01:22:08,233] [pool-1-thread-3] Initializing /data/qa-7642/8.dm4: [testng] [2024-10-09 01:22:08,936] [pool-1-thread-12] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-10-09 01:22:09,362] [pool-1-thread-2] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-10-09 01:22:10,875] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-10-09 01:22:11,109] [pool-1-thread-7] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-10-09 01:22:11,575] [pool-1-thread-10] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-10-09 01:22:12,471] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-10-09 01:22:13,038] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-10-09 01:22:14,784] [pool-1-thread-3] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-10-09 01:22:15,176] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-10-09 01:22:16,090] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-10-09 01:22:16,358] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-10-09 01:22:17,786] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-09 01:22:19,140] [pool-1-thread-11] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [2024-10-09 01:22:19,459] [pool-1-thread-4] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-10-09 01:22:19,728] [pool-1-thread-6] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-10-09 01:22:21,668] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-10-09 01:22:22,107] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-10-09 01:22:22,896] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-10-09 01:22:23,216] [pool-1-thread-2] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-10-09 01:22:25,771] [pool-1-thread-11] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-10-09 01:22:25,970] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-10-09 01:22:26,297] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-10-09 01:22:27,772] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-10-09 01:22:28,593] [pool-1-thread-10] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-10-09 01:22:29,250] [pool-1-thread-11] Initializing /data/qa-21761/example.dm4: [testng] [2024-10-09 01:22:29,569] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-10-09 01:22:30,581] [pool-1-thread-3] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-10-09 01:22:31,122] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-10-09 01:22:32,458] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-10-09 01:22:33,974] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-10-09 01:22:34,234] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-10-09 01:22:34,428] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-10-09 01:22:35,341] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-09 01:22:36,687] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-10-09 01:22:36,954] [pool-1-thread-8] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-10-09 01:22:37,225] [pool-1-thread-5] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-10-09 01:22:37,711] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-10-09 01:22:37,981] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-10-09 01:22:39,184] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-10-09 01:22:39,686] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-10-09 01:22:39,905] [pool-1-thread-4] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-09 01:22:41,125] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-10-09 01:22:41,325] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-10-09 01:22:41,573] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-10-09 01:22:42,125] [pool-1-thread-6] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-10-09 01:22:42,388] [pool-1-thread-8] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-10-09 01:22:42,620] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-10-09 01:22:43,230] [pool-1-thread-12] Initializing /data/samples/test-tiles.dm3: [testng] [2024-10-09 01:22:44,036] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-10-09 01:22:44,454] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-10-09 01:22:44,722] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-10-09 01:22:44,942] [pool-1-thread-1] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-09 01:22:45,321] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-10-09 01:22:46,103] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-10-09 01:22:46,648] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-10-09 01:22:47,120] [pool-1-thread-7] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-10-09 01:22:47,637] [pool-1-thread-5] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-10-09 01:22:47,859] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-10-09 01:22:48,221] [pool-1-thread-1] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-09 01:22:49,452] [pool-1-thread-2] Initializing /data/jay/smallerfile.dm3: [testng] [2024-10-09 01:22:50,189] [pool-1-thread-3] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-10-09 01:22:50,414] [pool-1-thread-9] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-10-09 01:22:52,284] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-10-09 01:22:52,496] [pool-1-thread-12] Initializing /data/jay/DMtest.dm3: [testng] [2024-10-09 01:22:52,899] [pool-1-thread-7] Initializing /data/jay/biosamplefullframetif.tif: [testng] [2024-10-09 01:22:54,242] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-10-09 01:22:54,611] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-10-09 01:22:54,863] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-10-09 01:22:55,678] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-10-09 01:22:55,915] [pool-1-thread-8] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 57 seconds Finished: SUCCESS