![[Jenkins]](/jenkins/static/f5fa13f0/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 216 originally caused by: Started by upstream project "Trigger" build number 243 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins13523098967068639178.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_34206_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:23:04,472 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:23:04,473 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 01:23:04,474 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:23:04,474 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:23:04,475 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:23:04,475 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:23:04,475 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:23:04,475 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:23:04,476 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:23:04,476 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:23:04,477 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:23:04,477 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:23:04,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:23:04,636 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:23:04,660 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:23:04,661 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:23:04,668 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:23:04,668 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:23:04,668 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:23:04,668 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:23:04,668 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 01:23:04,669 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 01:23:04,669 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 193 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-10 01:23:04,678] [main] java.version = 21 [testng] 01:23:04,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:23:04,682 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:04,724 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-10_01-23-04.log] [testng] 01:23:04,726 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-10-10 01:23:04,727] [main] testng.directory = /data [testng] [2024-10-10 01:23:04,728] [main] testng.configDirectory = /config [testng] [2024-10-10 01:23:04,737] [main] testng.multiplier = 1.0 [testng] [2024-10-10 01:23:04,738] [main] testng.in-memory = false [testng] [2024-10-10 01:23:04,738] [main] testng.allow-missing = false [testng] [2024-10-10 01:23:04,738] [main] user.language = en [testng] [2024-10-10 01:23:04,738] [main] user.country = ${user.country} [testng] [2024-10-10 01:23:04,738] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-10 01:23:13,963] [main] ---------------------------------------- [testng] [2024-10-10 01:23:13,963] [main] Total files: 103 [testng] [2024-10-10 01:23:13,963] [main] Scan time: 9.225 s (89 ms/file) [testng] [2024-10-10 01:23:13,963] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-10 01:23:44,129] [pool-1-thread-1] Initializing /data/jay/samples/APC2a-e4.tif: [testng] 01:23:44,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:23:44,130 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:44,132 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-10_01-23-44.log] [testng] 01:23:44,132 |-INFO in ch.qos.logback.core.sift.SiftProcessor@340cdf3f - End of configuration. [testng] [2024-10-10 01:23:44,652] [pool-1-thread-12] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] 01:23:44,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:23:44,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:44,653 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-10_01-23-44.log] [testng] 01:23:44,653 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7a912c99 - End of configuration. [testng] [2024-10-10 01:23:44,742] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] 01:23:44,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:23:44,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:44,743 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-10_01-23-44.log] [testng] 01:23:44,743 |-INFO in ch.qos.logback.core.sift.SiftProcessor@344708d2 - End of configuration. [testng] [2024-10-10 01:23:44,817] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] 01:23:44,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:23:44,818 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:44,818 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-10_01-23-44.log] [testng] 01:23:44,819 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b59108f - End of configuration. [testng] [2024-10-10 01:23:44,905] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] 01:23:44,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:23:44,905 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:44,906 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-10_01-23-44.log] [testng] 01:23:44,906 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1e4cd742 - End of configuration. [testng] [2024-10-10 01:23:44,990] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] 01:23:44,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:23:44,990 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:44,991 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-10_01-23-44.log] [testng] 01:23:44,991 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66f6340e - End of configuration. [testng] [2024-10-10 01:23:45,094] [pool-1-thread-7] Initializing /data/jay/biosamplefullframetif.tif: [testng] 01:23:45,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:23:45,094 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:45,095 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-10_01-23-45.log] [testng] 01:23:45,095 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e014271 - End of configuration. [testng] [2024-10-10 01:23:45,716] [pool-1-thread-6] Initializing /data/jay/Carbon.34.dm3: [testng] 01:23:45,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:23:45,716 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:45,716 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-10_01-23-45.log] [testng] 01:23:45,717 |-INFO in ch.qos.logback.core.sift.SiftProcessor@675de9b8 - End of configuration. [testng] [2024-10-10 01:23:45,843] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] 01:23:45,843 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:23:45,844 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:45,844 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-10_01-23-45.log] [testng] 01:23:45,844 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2525044f - End of configuration. [testng] [2024-10-10 01:23:46,025] [pool-1-thread-4] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] 01:23:46,025 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:23:46,026 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:46,027 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-10_01-23-46.log] [testng] 01:23:46,027 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f3b47cc - End of configuration. [testng] [2024-10-10 01:23:46,179] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] 01:23:46,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:23:46,179 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:46,180 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-10_01-23-46.log] [testng] 01:23:46,180 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38636bfc - End of configuration. [testng] [2024-10-10 01:23:46,272] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] 01:23:46,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:23:46,272 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:23:46,273 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-10_01-23-46.log] [testng] 01:23:46,273 |-INFO in ch.qos.logback.core.sift.SiftProcessor@714d4311 - End of configuration. [testng] [2024-10-10 01:23:49,247] [pool-1-thread-12] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-10-10 01:23:49,507] [pool-1-thread-9] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-10-10 01:23:50,317] [pool-1-thread-10] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-10-10 01:23:50,446] [pool-1-thread-11] Initializing /data/jay/DMtest.dm3: [testng] [2024-10-10 01:23:50,566] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-10-10 01:23:50,749] [pool-1-thread-3] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-10-10 01:23:52,944] [pool-1-thread-2] Initializing /data/jay/smallerfile.dm3: [testng] [2024-10-10 01:23:53,210] [pool-1-thread-6] Initializing /data/jay/dnasample.tif: [testng] [2024-10-10 01:23:54,059] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-10-10 01:23:54,770] [pool-1-thread-4] Initializing /data/qa-7642/8.dm4: [testng] [2024-10-10 01:23:55,569] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-10-10 01:23:55,918] [pool-1-thread-1] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-10-10 01:23:56,071] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] [2024-10-10 01:23:56,445] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-10 01:23:57,915] [pool-1-thread-7] Initializing /data/melissa/annotation-test.tif: [testng] [2024-10-10 01:23:58,352] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-10-10 01:23:58,954] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-10-10 01:23:59,394] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-10-10 01:23:59,537] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] [2024-10-10 01:24:00,511] [pool-1-thread-8] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-10-10 01:24:01,051] [pool-1-thread-3] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-10-10 01:24:01,964] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-10-10 01:24:02,488] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-10-10 01:24:03,375] [pool-1-thread-8] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-10 01:24:04,654] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] [2024-10-10 01:24:05,384] [pool-1-thread-4] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-10-10 01:24:05,591] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] [2024-10-10 01:24:06,702] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-10-10 01:24:07,402] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-10-10 01:24:08,653] [pool-1-thread-12] Initializing /data/jay/DMtest2.dm3: [testng] [2024-10-10 01:24:09,227] [pool-1-thread-4] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-10-10 01:24:09,522] [pool-1-thread-9] Initializing /data/ofra/lowloss.dm3: [testng] [2024-10-10 01:24:09,763] [pool-1-thread-10] Initializing /data/samples/test-tiles.dm3: [testng] [2024-10-10 01:24:10,598] [pool-1-thread-5] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-10-10 01:24:10,923] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-10-10 01:24:11,767] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-10-10 01:24:12,203] [pool-1-thread-10] Initializing /data/jay/dnasample1.dm3: [testng] [2024-10-10 01:24:12,971] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-10-10 01:24:14,242] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-10-10 01:24:14,891] [pool-1-thread-8] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-10-10 01:24:15,209] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-10-10 01:24:15,589] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-10 01:24:16,609] [pool-1-thread-11] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-10-10 01:24:16,829] [pool-1-thread-3] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-10-10 01:24:17,379] [pool-1-thread-1] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-10-10 01:24:17,824] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-10-10 01:24:17,995] [pool-1-thread-4] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-10-10 01:24:18,092] [pool-1-thread-7] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-10-10 01:24:20,249] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] [2024-10-10 01:24:20,826] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-10-10 01:24:21,236] [pool-1-thread-10] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-10 01:24:21,460] [pool-1-thread-2] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-10-10 01:24:21,919] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-10-10 01:24:22,078] [pool-1-thread-8] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-10 01:24:22,358] [pool-1-thread-1] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-10-10 01:24:22,498] [pool-1-thread-12] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-10 01:24:24,350] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-10-10 01:24:25,745] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-10-10 01:24:26,726] [pool-1-thread-10] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-10-10 01:24:27,562] [pool-1-thread-3] Initializing /data/jay/camtest1.dm3: [testng] [2024-10-10 01:24:27,893] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-10-10 01:24:28,174] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-10-10 01:24:28,477] [pool-1-thread-6] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-10-10 01:24:28,689] [pool-1-thread-7] Initializing /data/melissa/annotation-test.dm3: [testng] [2024-10-10 01:24:29,112] [pool-1-thread-2] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-10-10 01:24:29,613] [pool-1-thread-5] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-10-10 01:24:31,313] [pool-1-thread-7] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] [2024-10-10 01:24:32,103] [pool-1-thread-11] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-10-10 01:24:32,234] [pool-1-thread-8] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-10-10 01:24:33,930] [pool-1-thread-3] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-10-10 01:24:34,260] [pool-1-thread-7] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] [2024-10-10 01:24:35,024] [pool-1-thread-9] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-10-10 01:24:35,190] [pool-1-thread-2] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-10-10 01:24:35,981] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-10-10 01:24:36,223] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-10-10 01:24:36,567] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-10-10 01:24:37,091] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-10 01:24:37,839] [pool-1-thread-12] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-10-10 01:24:39,098] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-10-10 01:24:40,278] [pool-1-thread-10] Initializing /data/qa-21761/example.dm4: [testng] [2024-10-10 01:24:40,464] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-10-10 01:24:40,680] [pool-1-thread-6] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-10-10 01:24:40,983] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-10-10 01:24:42,142] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-10-10 01:24:42,569] [pool-1-thread-9] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-10 01:24:44,609] [pool-1-thread-2] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 58 seconds Finished: SUCCESS