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Started by upstream project "BIOFORMATS-test-repo" build number 216 originally caused by: Started by upstream project "Trigger" build number 243 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@2 [BIOFORMATS-test-folder@2] $ /bin/bash -xe /tmp/jenkins1774232577812587712.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_34245_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:55:20,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:55:20,376 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:55:20,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:55:20,410 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:55:20,429 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:55:20,429 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:55:20,429 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:55:20,430 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:55:20,430 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2d710f1a - End of configuration. [testng] 01:55:20,431 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@13fd2ccd - Registering current configuration as safe fallback point [testng] 01:55:20,431 |-INFO in ch.qos.logback.classic.util.ContextInitializer@b9b00e0 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 623 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-10 01:55:20,440] [main] java.version = 21 [testng] 01:55:20,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:55:20,443 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:55:20,625 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-10_01-55-20.log] [testng] 01:55:20,627 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-10-10 01:55:20,628] [main] testng.directory = /data [testng] [2024-10-10 01:55:20,628] [main] testng.configDirectory = /config [testng] [2024-10-10 01:55:20,647] [main] testng.multiplier = 1.0 [testng] [2024-10-10 01:55:20,666] [main] testng.in-memory = false [testng] [2024-10-10 01:55:20,666] [main] testng.allow-missing = false [testng] [2024-10-10 01:55:20,666] [main] user.language = en [testng] [2024-10-10 01:55:20,666] [main] user.country = ${user.country} [testng] [2024-10-10 01:55:20,666] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-10 01:56:15,688] [main] ---------------------------------------- [testng] [2024-10-10 01:56:15,688] [main] Total files: 259 [testng] [2024-10-10 01:56:15,688] [main] Scan time: 55.022 s (212 ms/file) [testng] [2024-10-10 01:56:15,689] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-10 02:13:04,051] [pool-1-thread-1] Initializing /data/molly/11OCT2.OIF: [testng] 02:13:04,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:13:04,052 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:04,053 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-10_02-13-04.log] [testng] 02:13:04,054 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c31bca - End of configuration. [testng] [2024-10-10 02:13:29,655] [pool-1-thread-12] Initializing /data/kay/IM2pg.oib: [testng] 02:13:29,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:13:29,655 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:29,656 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-10_02-13-29.log] [testng] 02:13:29,656 |-INFO in ch.qos.logback.core.sift.SiftProcessor@228dfed - End of configuration. [testng] [2024-10-10 02:13:30,466] [pool-1-thread-11] Initializing /data/johannes/step2.bmp: [testng] 02:13:30,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:13:30,466 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:30,467 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-10_02-13-30.log] [testng] 02:13:30,468 |-INFO in ch.qos.logback.core.sift.SiftProcessor@56373f36 - End of configuration. [testng] [2024-10-10 02:13:30,635] [pool-1-thread-10] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] 02:13:30,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:13:30,635 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:30,636 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-10_02-13-30.log] [testng] 02:13:30,636 |-INFO in ch.qos.logback.core.sift.SiftProcessor@372b27c3 - End of configuration. [testng] [2024-10-10 02:13:31,235] [pool-1-thread-9] Initializing /data/chris/missegragation-15.oib: [testng] 02:13:31,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:13:31,235 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:31,236 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-10_02-13-31.log] [testng] 02:13:31,236 |-INFO in ch.qos.logback.core.sift.SiftProcessor@626501d4 - End of configuration. [testng] [2024-10-10 02:13:31,540] [pool-1-thread-8] Initializing /data/aryeh/1h_after_pdt.oib: [testng] 02:13:31,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:13:31,540 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:31,541 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-10_02-13-31.log] [testng] 02:13:31,541 |-INFO in ch.qos.logback.core.sift.SiftProcessor@75efce7 - End of configuration. [testng] [2024-10-10 02:13:39,327] [pool-1-thread-7] Initializing /data/allan/new_30min3_1z2.oib: [testng] 02:13:39,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:13:39,327 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:39,328 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-10_02-13-39.log] [testng] 02:13:39,328 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a6c22e5 - End of configuration. [testng] [2024-10-10 02:13:40,074] [pool-1-thread-6] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] 02:13:40,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:13:40,074 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:40,075 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-10_02-13-40.log] [testng] 02:13:40,075 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e519c94 - End of configuration. [testng] [2024-10-10 02:13:40,502] [pool-1-thread-5] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 02:13:40,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:13:40,502 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:40,503 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-10_02-13-40.log] [testng] 02:13:40,504 |-INFO in ch.qos.logback.core.sift.SiftProcessor@20360706 - End of configuration. [testng] [2024-10-10 02:13:41,373] [pool-1-thread-4] Initializing /data/stefan/cytosol_01a.oif: [testng] 02:13:41,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:13:41,374 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:13:41,374 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-10_02-13-41.log] [testng] 02:13:41,375 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ee1bb3d - End of configuration. [testng] [2024-10-10 02:14:26,296] [pool-1-thread-3] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 02:14:26,296 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:14:26,297 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:26,299 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-10_02-14-26.log] [testng] 02:14:26,299 |-INFO in ch.qos.logback.core.sift.SiftProcessor@500fb382 - End of configuration. [testng] [2024-10-10 02:14:27,303] [pool-1-thread-2] Initializing /data/glen/LUT issue/60x11.oif: [testng] 02:14:27,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:14:27,303 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:27,304 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-10_02-14-27.log] [testng] 02:14:27,305 |-INFO in ch.qos.logback.core.sift.SiftProcessor@919ca1a - End of configuration. [testng] [2024-10-10 02:14:34,362] [pool-1-thread-11] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-10 02:14:39,949] [pool-1-thread-9] Initializing /data/aryeh/1h.oib: [testng] [2024-10-10 02:14:43,466] [pool-1-thread-7] Initializing /data/david/Image0016.oib: [testng] [2024-10-10 02:14:44,498] [pool-1-thread-6] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-10-10 02:14:45,612] [pool-1-thread-12] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-10 02:14:46,847] [pool-1-thread-10] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-10 02:14:50,671] [pool-1-thread-10] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-10 02:14:53,160] [pool-1-thread-7] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-10 02:14:53,519] [pool-1-thread-6] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-10 02:14:56,680] [pool-1-thread-12] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-10-10 02:14:57,754] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] [2024-10-10 02:14:59,341] [pool-1-thread-8] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-10 02:15:01,430] [pool-1-thread-10] Initializing /data/johannes/step3.bmp: [testng] [2024-10-10 02:15:02,429] [pool-1-thread-9] Initializing /data/glen/Image0002.oif: [testng] [2024-10-10 02:15:09,724] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-10 02:15:11,808] [pool-1-thread-10] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-10 02:15:14,851] [pool-1-thread-12] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-10 02:15:17,820] [pool-1-thread-11] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-10 02:15:20,805] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-10 02:15:22,687] [pool-1-thread-3] Initializing /data/johannes/step1.bmp: [testng] [2024-10-10 02:15:23,534] [pool-1-thread-6] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-10 02:15:26,008] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-10-10 02:15:28,508] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-10 02:15:29,801] [pool-1-thread-11] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-10 02:15:31,589] [pool-1-thread-7] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-10 02:15:33,310] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-10 02:15:36,328] [pool-1-thread-10] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-10 02:15:38,060] [pool-1-thread-11] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-10 02:15:38,663] [pool-1-thread-7] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-10 02:15:40,324] [pool-1-thread-5] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-10-10 02:15:41,534] [pool-1-thread-3] Initializing /data/michael/CELL3.oib: [testng] [2024-10-10 02:15:45,011] [pool-1-thread-6] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-10 02:15:46,116] [pool-1-thread-11] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-10 02:15:48,257] [pool-1-thread-10] Initializing /data/simon/never_worked.oib: [testng] [2024-10-10 02:15:50,316] [pool-1-thread-3] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-10 02:15:50,750] [pool-1-thread-5] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-10-10 02:15:52,722] [pool-1-thread-6] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-10 02:15:54,217] [pool-1-thread-10] Initializing /data/molly/11OCT5.OIF: [testng] [2024-10-10 02:16:14,327] [pool-1-thread-3] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-10 02:16:15,457] [pool-1-thread-11] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-10-10 02:16:18,995] [pool-1-thread-5] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-10-10 02:16:19,746] [pool-1-thread-8] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-10 02:16:21,151] [pool-1-thread-3] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-10 02:16:21,999] [pool-1-thread-11] Initializing /data/marc/V0606L.oib: [testng] [2024-10-10 02:16:27,381] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-10 02:16:30,328] [pool-1-thread-8] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-10-10 02:16:31,767] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-10 02:16:37,211] [pool-1-thread-8] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-10 02:16:37,619] [pool-1-thread-5] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-10 02:16:39,499] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-10 02:16:40,843] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-10 02:16:45,530] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-10-10 02:16:58,858] [pool-1-thread-3] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-10 02:17:29,975] [pool-1-thread-5] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-10 02:17:31,864] [pool-1-thread-8] Initializing /data/david/Image0016.oif: [testng] [2024-10-10 02:17:35,549] [pool-1-thread-6] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-10 02:17:40,842] [pool-1-thread-7] Initializing /data/marc/V0606J.oib: [testng] [2024-10-10 02:17:45,929] [pool-1-thread-5] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-10 02:18:26,529] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-10-10 02:18:34,793] [pool-1-thread-7] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-10 02:20:06,987] [pool-1-thread-12] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-10 02:20:24,234] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-10 02:20:32,926] [pool-1-thread-12] Initializing /data/sten/01.oib: [testng] [2024-10-10 02:20:40,260] [pool-1-thread-12] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-10 02:20:50,539] [pool-1-thread-12] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-10 02:20:58,121] [pool-1-thread-12] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-10 02:21:05,005] [pool-1-thread-8] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-10 02:21:14,786] [pool-1-thread-8] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-10 02:30:40,548] [pool-1-thread-6] Initializing /data/jae/Image0001.oib: [testng] [2024-10-10 02:30:51,389] [pool-1-thread-6] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-10-10 02:31:03,780] [pool-1-thread-6] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-10 02:41:28,483] [pool-1-thread-2] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-10 02:41:48,011] [pool-1-thread-2] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-10 02:42:07,583] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-10 02:42:27,803] [pool-1-thread-2] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-10 02:42:47,030] [pool-1-thread-2] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-10 02:45:09,579] [pool-1-thread-2] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-10 02:45:25,339] [pool-1-thread-2] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-10 02:45:34,275] [pool-1-thread-12] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-10 02:45:41,725] [pool-1-thread-2] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-10-10 02:45:52,103] [pool-1-thread-12] Initializing /data/christian/20min.oif: [testng] [2024-10-10 02:46:00,950] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-10 02:46:18,306] [pool-1-thread-2] Initializing /data/glen/111407.oif: [testng] [2024-10-10 02:47:18,723] [pool-1-thread-12] Initializing /data/glen/simulstack.oif: [testng] [2024-10-10 02:54:02,619] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-10 02:54:16,551] [pool-1-thread-9] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-10 02:54:29,583] [pool-1-thread-9] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-10 03:01:08,123] [pool-1-thread-9] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-10 03:02:38,732] [pool-1-thread-10] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-10-10 03:03:52,820] [pool-1-thread-5] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-10 03:04:05,012] [pool-1-thread-10] Initializing /data/glen/simulstack.oib: [testng] [2024-10-10 03:04:13,243] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-10-10 03:04:25,414] [pool-1-thread-10] Initializing /data/pedro/plv-test.oib: [testng] [2024-10-10 03:04:36,147] [pool-1-thread-10] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-10 03:04:48,214] [pool-1-thread-10] Initializing /data/allan/62909#1.oib: [testng] [2024-10-10 03:05:01,674] [pool-1-thread-10] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-10 03:05:50,485] [pool-1-thread-5] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-10 03:10:11,033] [pool-1-thread-9] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-10 03:12:05,508] [pool-1-thread-3] Initializing /data/brian/FLIP.oib: [testng] [2024-10-10 03:12:17,717] [pool-1-thread-3] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-10 03:14:25,648] [pool-1-thread-8] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-10 03:22:34,066] [pool-1-thread-2] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-10 03:22:58,774] [pool-1-thread-11] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-10 03:23:05,310] [pool-1-thread-11] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-10 03:23:07,718] [pool-1-thread-12] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-10 03:23:14,349] [pool-1-thread-2] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-10 03:23:16,291] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-10 03:23:19,969] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-10 03:23:28,418] [pool-1-thread-11] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-10 03:23:36,560] [pool-1-thread-11] Initializing /data/karl/Image0009.oib: [testng] [2024-10-10 03:23:43,534] [pool-1-thread-11] Initializing /data/molly/11OCT4.OIF: [testng] [2024-10-10 03:24:29,582] [pool-1-thread-2] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-10 03:24:36,656] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-10 03:24:45,001] [pool-1-thread-2] Initializing /data/molly/11OCT9.OIF: [testng] 03:26:37,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 03:26:37,898 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:26:37,899 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-10_03-26-37.log] [testng] 03:26:37,900 |-INFO in ch.qos.logback.core.sift.SiftProcessor@c1dc616 - End of configuration. [testng] [2024-10-10 03:27:37,999] [pool-1-thread-3] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-10 03:27:45,640] [pool-1-thread-3] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-10 03:27:49,944] [pool-1-thread-12] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-10 03:27:55,470] [pool-1-thread-3] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-10 03:28:06,328] [pool-1-thread-12] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-10 03:28:13,745] [pool-1-thread-12] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-10 03:30:33,222] [pool-1-thread-6] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-10 03:30:35,386] [pool-1-thread-6] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-10 03:32:05,790] [pool-1-thread-1] Initializing /data/monica/Image0056.oif: [testng] [2024-10-10 03:33:14,581] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-10 03:33:25,242] [pool-1-thread-1] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-10 03:33:34,580] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-10 03:35:47,172] [pool-1-thread-6] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-10 03:35:57,984] [pool-1-thread-6] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-10 03:36:04,215] [pool-1-thread-6] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-10 03:36:11,682] [pool-1-thread-6] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-10 03:36:17,410] [pool-1-thread-6] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-10-10 03:37:04,470] [pool-1-thread-6] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 04:08:29,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:08:29,615 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:08:29,617 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-10_04-08-29.log] [testng] 04:08:29,617 |-INFO in ch.qos.logback.core.sift.SiftProcessor@120c5356 - End of configuration. [testng] 04:43:08,103 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:43:08,103 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:43:08,105 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-10_04-43-08.log] [testng] 04:43:08,105 |-INFO in ch.qos.logback.core.sift.SiftProcessor@222563bd - End of configuration. [testng] 05:03:52,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 05:03:52,648 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:03:52,649 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-10_05-03-52.log] [testng] 05:03:52,650 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a714ef2 - End of configuration. [testng] 05:12:51,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:12:51,959 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:12:51,959 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-10_05-12-51.log] [testng] 05:12:51,959 |-INFO in ch.qos.logback.core.sift.SiftProcessor@a0d555f - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 197 minutes 39 seconds Finished: SUCCESS