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Started by upstream project "BIOFORMATS-test-repo" build number 216 originally caused by: Started by upstream project "Trigger" build number 243 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins11573015579353686667.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 4 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_34332_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] warning: [options] source value 8 is obsolete and will be removed in a future release [javac] warning: [options] target value 8 is obsolete and will be removed in a future release [javac] warning: [options] To suppress warnings about obsolete options, use -Xlint:-options. [javac] 4 warnings test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 05:51:21,384 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 05:51:21,385 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - No custom configurators were discovered as a service. [testng] 05:51:21,385 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 05:51:21,386 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 05:51:21,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 05:51:21,387 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 05:51:21,387 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 05:51:21,387 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 05:51:21,388 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 05:51:21,388 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 05:51:21,389 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 05:51:21,389 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 05:51:21,549 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 05:51:21,550 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 05:51:21,581 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 05:51:21,582 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 05:51:21,588 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 05:51:21,588 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 05:51:21,588 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 05:51:21,589 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 05:51:21,589 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@29215f06 - End of configuration. [testng] 05:51:21,590 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@b9b00e0 - Registering current configuration as safe fallback point [testng] 05:51:21,590 |-INFO in ch.qos.logback.classic.util.ContextInitializer@4f67eb2a - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 202 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-10 05:51:21,599] [main] java.version = 21 [testng] 05:51:21,602 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:51:21,602 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:51:21,647 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-10_05-51-21.log] [testng] 05:51:21,649 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b919693 - End of configuration. [testng] [2024-10-10 05:51:21,651] [main] testng.directory = /data [testng] [2024-10-10 05:51:21,651] [main] testng.configDirectory = /config [testng] [2024-10-10 05:51:21,660] [main] testng.multiplier = 1.0 [testng] [2024-10-10 05:51:21,661] [main] testng.in-memory = false [testng] [2024-10-10 05:51:21,661] [main] testng.allow-missing = false [testng] [2024-10-10 05:51:21,661] [main] user.language = en [testng] [2024-10-10 05:51:21,661] [main] user.country = ${user.country} [testng] [2024-10-10 05:51:21,661] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-10 05:53:36,720] [main] ---------------------------------------- [testng] [2024-10-10 05:53:36,721] [main] Total files: 15735 [testng] [2024-10-10 05:53:36,721] [main] Scan time: 135.059 s (8 ms/file) [testng] [2024-10-10 05:53:36,721] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-10 05:57:09,652] [pool-1-thread-1] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 05:57:09,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 05:57:09,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:09,654 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-10_05-57-09.log] [testng] 05:57:09,654 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59bbea29 - End of configuration. [testng] [2024-10-10 05:57:12,544] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] 05:57:12,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 05:57:12,544 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:12,545 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-10_05-57-12.log] [testng] 05:57:12,545 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f8f5386 - End of configuration. [testng] [2024-10-10 05:57:14,423] [pool-1-thread-11] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] 05:57:14,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 05:57:14,423 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:14,424 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-10_05-57-14.log] [testng] 05:57:14,424 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4acc8fc1 - End of configuration. [testng] [2024-10-10 05:57:15,575] [pool-1-thread-10] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] 05:57:15,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 05:57:15,575 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:15,576 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-10_05-57-15.log] [testng] 05:57:15,576 |-INFO in ch.qos.logback.core.sift.SiftProcessor@673bbc81 - End of configuration. [testng] [2024-10-10 05:57:20,141] [pool-1-thread-9] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] 05:57:20,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 05:57:20,141 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:20,141 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-10_05-57-20.log] [testng] 05:57:20,142 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ad6c9be - End of configuration. [testng] [2024-10-10 05:57:21,479] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] 05:57:21,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 05:57:21,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:21,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-10_05-57-21.log] [testng] 05:57:21,481 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2ede508b - End of configuration. [testng] [2024-10-10 05:57:22,652] [pool-1-thread-7] Initializing /data/scott/Slide133-01.tif: [testng] 05:57:22,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 05:57:22,652 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:22,653 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-10_05-57-22.log] [testng] 05:57:22,653 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a7403c7 - End of configuration. [testng] [2024-10-10 05:57:24,062] [pool-1-thread-6] Initializing /data/scott/Slide133-04.tif: [testng] 05:57:24,062 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 05:57:24,062 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:24,063 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-10_05-57-24.log] [testng] 05:57:24,063 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77047bff - End of configuration. [testng] [2024-10-10 05:57:25,364] [pool-1-thread-5] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] 05:57:25,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 05:57:25,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:25,365 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-10_05-57-25.log] [testng] 05:57:25,365 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4121560c - End of configuration. [testng] [2024-10-10 05:57:26,690] [pool-1-thread-4] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 05:57:26,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 05:57:26,690 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:26,691 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-10_05-57-26.log] [testng] 05:57:26,691 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3848bc75 - End of configuration. [testng] [2024-10-10 05:57:28,107] [pool-1-thread-3] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] 05:57:28,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 05:57:28,107 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:28,108 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-10_05-57-28.log] [testng] 05:57:28,108 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7e536289 - End of configuration. [testng] [2024-10-10 05:57:29,607] [pool-1-thread-2] Initializing /data/scott/Slide133-08.tif: [testng] 05:57:29,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 05:57:29,607 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:57:29,607 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-10_05-57-29.log] [testng] 05:57:29,608 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d648ea4 - End of configuration. [testng] [2024-10-10 05:57:57,219] [pool-1-thread-11] Initializing /data/converted/michel/c.tif: [testng] [2024-10-10 05:57:58,859] [pool-1-thread-3] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-10-10 05:58:01,029] [pool-1-thread-6] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-10-10 05:58:02,478] [pool-1-thread-7] Initializing /data/converted/converted/damian.tif: [testng] [2024-10-10 05:58:03,782] [pool-1-thread-2] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-10-10 05:58:14,101] [pool-1-thread-4] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-10-10 05:58:16,212] [pool-1-thread-9] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-10-10 05:58:25,547] [pool-1-thread-8] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-10-10 05:58:32,624] [pool-1-thread-7] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-10-10 05:58:37,309] [pool-1-thread-2] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-10-10 05:58:45,038] [pool-1-thread-11] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] [2024-10-10 05:58:54,756] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-10-10 05:59:04,353] [pool-1-thread-8] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-10-10 05:59:06,373] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-10-10 06:01:20,445] [pool-1-thread-5] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-10-10 06:01:55,478] [pool-1-thread-9] Initializing /data/scott/Slide133-11.tif: [testng] [2024-10-10 06:02:12,255] [pool-1-thread-4] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-10-10 06:02:24,132] [pool-1-thread-9] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-10-10 06:02:27,570] [pool-1-thread-3] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] [2024-10-10 06:02:48,718] [pool-1-thread-4] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-10-10 06:03:01,139] [pool-1-thread-3] Initializing /data/converted/michel/b.tif: [testng] [2024-10-10 06:03:13,199] [pool-1-thread-4] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-10-10 06:03:39,796] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-10-10 06:03:54,858] [pool-1-thread-5] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-10-10 06:04:09,710] [pool-1-thread-7] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-10-10 06:04:45,044] [pool-1-thread-7] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-10-10 06:05:10,967] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-10-10 06:05:29,695] [pool-1-thread-11] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] [2024-10-10 06:05:54,861] [pool-1-thread-7] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-10-10 06:06:32,329] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-10-10 06:07:12,414] [pool-1-thread-2] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-10-10 06:07:51,401] [pool-1-thread-2] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-10-10 06:07:53,392] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-10-10 06:09:43,219] [pool-1-thread-6] Initializing /data/converted/nicolas/image.tif: [testng] [2024-10-10 06:10:11,950] [pool-1-thread-6] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-10-10 06:12:08,213] [pool-1-thread-6] Initializing /data/converted/dietmar/137.tif: [testng] [2024-10-10 06:12:15,981] [pool-1-thread-3] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-10-10 06:12:29,761] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-10-10 06:12:48,445] [pool-1-thread-9] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-10-10 06:13:27,884] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] [2024-10-10 06:13:35,989] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-10-10 06:13:39,903] [pool-1-thread-5] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-10-10 06:13:58,527] [pool-1-thread-9] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-10-10 06:14:18,561] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-10-10 06:14:35,048] [pool-1-thread-12] Initializing /data/converted/sebastien/test.tif: [testng] [2024-10-10 06:14:40,362] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-10-10 06:14:55,618] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-10-10 06:18:01,797] [pool-1-thread-8] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-10-10 06:19:08,227] [pool-1-thread-8] Initializing /data/othmar/mozaic.tif: [testng] [2024-10-10 06:20:04,301] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-10-10 06:21:26,528] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-10-10 06:21:29,689] [pool-1-thread-6] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-10-10 06:22:12,387] [pool-1-thread-6] Initializing /data/converted/converted/2chz.tif: [testng] [2024-10-10 06:24:39,591] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-10-10 06:24:59,545] [pool-1-thread-8] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-10-10 06:25:36,389] [pool-1-thread-7] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-10-10 06:25:38,999] [pool-1-thread-8] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-10-10 06:26:21,516] [pool-1-thread-11] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-10-10 06:26:27,259] [pool-1-thread-7] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-10-10 06:26:46,621] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-10-10 06:27:03,350] [pool-1-thread-11] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-10-10 06:27:19,334] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-10-10 06:27:53,988] [pool-1-thread-7] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-10-10 06:30:28,940] [pool-1-thread-7] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-10-10 06:30:55,078] [pool-1-thread-3] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-10-10 06:31:30,731] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-10-10 06:32:42,991] [pool-1-thread-9] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] [2024-10-10 06:33:20,701] [pool-1-thread-9] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-10-10 06:33:49,072] [pool-1-thread-7] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-10-10 06:34:43,999] [pool-1-thread-7] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-10-10 06:34:47,957] [pool-1-thread-2] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-10-10 06:37:21,163] [pool-1-thread-6] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-10-10 06:37:34,456] [pool-1-thread-6] Initializing /data/converted/darren/section0002_w1.tif: [testng] [2024-10-10 06:37:52,341] [pool-1-thread-12] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-10-10 06:38:14,774] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-10-10 06:38:53,485] [pool-1-thread-6] Initializing /data/converted/michel/d.tif: [testng] [2024-10-10 06:39:08,572] [pool-1-thread-9] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-10-10 06:39:47,622] [pool-1-thread-6] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-10-10 06:40:30,376] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-10-10 06:41:16,444] [pool-1-thread-8] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-10-10 06:43:27,833] [pool-1-thread-6] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-10-10 06:44:07,501] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-10-10 06:44:23,751] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-10-10 06:45:24,152] [pool-1-thread-1] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-10-10 06:46:34,658] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-10-10 06:46:50,562] [pool-1-thread-4] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-10-10 06:53:43,895] [pool-1-thread-12] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-10-10 06:54:57,496] [pool-1-thread-12] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-10-10 06:55:37,180] [pool-1-thread-12] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-10-10 06:56:55,611] [pool-1-thread-12] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-10-10 06:57:07,464] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-10-10 06:57:23,861] [pool-1-thread-8] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-10-10 06:57:36,295] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] [2024-10-10 06:58:14,972] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-10-10 06:59:49,372] [pool-1-thread-4] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-10-10 07:00:15,955] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-10-10 07:01:51,210] [pool-1-thread-6] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-10-10 07:06:22,156] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-10-10 07:06:52,664] [pool-1-thread-9] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-10-10 07:07:29,306] [pool-1-thread-9] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-10-10 07:09:53,431] [pool-1-thread-3] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-10-10 07:10:01,717] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-10-10 07:12:04,826] [pool-1-thread-1] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-10-10 07:12:22,602] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-10-10 07:13:01,071] [pool-1-thread-1] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-10-10 07:13:03,888] [pool-1-thread-6] Initializing /data/converted/stephan/notok2.tif: [testng] [2024-10-10 07:13:46,234] [pool-1-thread-7] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-10-10 07:14:24,457] [pool-1-thread-7] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 07:14:55,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 07:14:55,997 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:14:55,998 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-10_07-14-55.log] [testng] 07:14:55,999 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d3689 - End of configuration. [testng] [2024-10-10 07:15:08,782] [pool-1-thread-7] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-10-10 07:15:44,887] [pool-1-thread-3] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-10-10 07:15:58,177] [pool-1-thread-7] Initializing /data/converted/michel/e.tif: [testng] [2024-10-10 07:16:03,838] [pool-1-thread-1] Initializing /data/converted/dietmar/138.tif: [testng] [2024-10-10 07:16:06,994] [pool-1-thread-6] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 08:14:20,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 08:14:20,058 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:14:20,060 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-10_08-14-20.log] [testng] 08:14:20,061 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1abe9281 - End of configuration. [testng] 08:17:33,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 08:17:33,290 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:17:33,291 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-10_08-17-33.log] [testng] 08:17:33,291 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3310bb28 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 146 minutes 16 seconds Finished: SUCCESS