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Started by upstream project "BIOFORMATS-test-repo" build number 217 originally caused by: Started by upstream project "Trigger" build number 244 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins17498759798849592264.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_34409_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:14:45,739 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:14:45,741 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 02:14:45,741 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:14:45,742 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:14:45,742 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:14:45,742 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:14:45,742 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:14:45,742 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:14:45,743 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:14:45,743 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:14:45,743 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:14:45,743 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:14:45,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:14:45,953 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:14:45,978 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:14:45,979 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:14:45,986 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:14:45,986 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:14:45,986 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:14:45,987 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:14:45,987 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 02:14:45,987 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 02:14:45,987 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 244 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-11 02:14:45,997] [main] java.version = 1.8.0_342 [testng] 02:14:46,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:14:46,000 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:14:46,042 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-11_02-14-46.log] [testng] 02:14:46,043 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-11 02:14:46,045] [main] testng.directory = /data [testng] [2024-10-11 02:14:46,045] [main] testng.configDirectory = /config [testng] [2024-10-11 02:14:46,057] [main] testng.multiplier = 1.0 [testng] [2024-10-11 02:14:46,057] [main] testng.in-memory = false [testng] [2024-10-11 02:14:46,057] [main] testng.allow-missing = false [testng] [2024-10-11 02:14:46,057] [main] user.language = en [testng] [2024-10-11 02:14:46,057] [main] user.country = ${user.country} [testng] [2024-10-11 02:14:46,057] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-11 02:16:22,449] [main] ---------------------------------------- [testng] [2024-10-11 02:16:22,449] [main] Total files: 259 [testng] [2024-10-11 02:16:22,450] [main] Scan time: 96.391 s (372 ms/file) [testng] [2024-10-11 02:16:22,450] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-11 02:55:45,368] [pool-1-thread-1] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] 02:55:45,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:55:45,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:55:45,370 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-11_02-55-45.log] [testng] 02:55:45,370 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1af03109 - End of configuration. [testng] [2024-10-11 02:55:52,856] [pool-1-thread-12] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] 02:55:52,856 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:55:52,856 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:55:52,857 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-11_02-55-52.log] [testng] 02:55:52,857 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c69bf75 - End of configuration. [testng] [2024-10-11 02:55:53,111] [pool-1-thread-11] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] 02:55:53,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:55:53,111 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:55:53,112 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-11_02-55-53.log] [testng] 02:55:53,112 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3500229b - End of configuration. [testng] [2024-10-11 02:56:25,747] [pool-1-thread-10] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] 02:56:25,747 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:56:25,747 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:56:25,748 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-11_02-56-25.log] [testng] 02:56:25,748 |-INFO in ch.qos.logback.core.sift.SiftProcessor@572311e1 - End of configuration. [testng] [2024-10-11 02:56:28,998] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] 02:56:28,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:56:28,998 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:56:28,999 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-11_02-56-28.log] [testng] 02:56:28,999 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52752ae - End of configuration. [testng] [2024-10-11 02:56:30,065] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] 02:56:30,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:56:30,065 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:56:30,066 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-11_02-56-30.log] [testng] 02:56:30,066 |-INFO in ch.qos.logback.core.sift.SiftProcessor@39a5353d - End of configuration. [testng] [2024-10-11 02:56:31,733] [pool-1-thread-7] Initializing /data/molly/11OCT4.OIF: [testng] 02:56:31,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:56:31,734 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:56:31,734 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-11_02-56-31.log] [testng] 02:56:31,735 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4262e88a - End of configuration. [testng] [2024-10-11 02:58:13,607] [pool-1-thread-6] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] 02:58:13,608 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:58:13,608 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:58:13,609 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-11_02-58-13.log] [testng] 02:58:13,609 |-INFO in ch.qos.logback.core.sift.SiftProcessor@541e0588 - End of configuration. [testng] [2024-10-11 02:58:17,694] [pool-1-thread-5] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] 02:58:17,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:58:17,694 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:58:17,695 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-11_02-58-17.log] [testng] 02:58:17,695 |-INFO in ch.qos.logback.core.sift.SiftProcessor@41aa624f - End of configuration. [testng] [2024-10-11 02:58:19,668] [pool-1-thread-4] Initializing /data/molly/11OCT5.OIF: [testng] 02:58:19,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:58:19,669 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:58:19,669 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-11_02-58-19.log] [testng] 02:58:19,670 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1ce54e01 - End of configuration. [testng] [2024-10-11 02:59:40,479] [pool-1-thread-3] Initializing /data/glen/Null file/test no change.oif: [testng] 02:59:40,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:59:40,480 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:40,480 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-11_02-59-40.log] [testng] 02:59:40,481 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a5327ec - End of configuration. [testng] [2024-10-11 02:59:45,508] [pool-1-thread-2] Initializing /data/sten/01.oib: [testng] 02:59:45,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:59:45,508 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:59:45,509 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-11_02-59-45.log] [testng] 02:59:45,510 |-INFO in ch.qos.logback.core.sift.SiftProcessor@b60262 - End of configuration. [testng] [2024-10-11 03:00:02,334] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-11 03:00:03,201] [pool-1-thread-8] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-11 03:00:20,153] [pool-1-thread-9] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-11 03:01:06,380] [pool-1-thread-2] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-11 03:01:10,011] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-11 03:01:11,375] [pool-1-thread-6] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] [2024-10-11 03:01:28,580] [pool-1-thread-12] Initializing /data/michael/CELL3.oib: [testng] [2024-10-11 03:01:36,830] [pool-1-thread-10] Initializing /data/brian/Lambda10nm.oib: [testng] [2024-10-11 03:01:56,980] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-11 03:02:10,021] [pool-1-thread-12] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-11 03:02:15,880] [pool-1-thread-10] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-11 03:09:08,901] [pool-1-thread-2] Initializing /data/glen/simulstack.oib: [testng] [2024-10-11 03:09:16,615] [pool-1-thread-12] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-11 03:10:24,103] [pool-1-thread-3] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-11 03:10:27,222] [pool-1-thread-5] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-11 03:10:37,963] [pool-1-thread-2] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-11 03:10:49,045] [pool-1-thread-3] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-11 03:10:53,041] [pool-1-thread-5] Initializing /data/monica/Image0056.oif: [testng] [2024-10-11 03:11:05,645] [pool-1-thread-2] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-11 03:11:14,841] [pool-1-thread-3] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-11 03:11:29,698] [pool-1-thread-2] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-11 03:11:41,003] [pool-1-thread-6] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-11 03:11:53,406] [pool-1-thread-3] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-11 03:12:12,353] [pool-1-thread-6] Initializing /data/glen/111407.oif: [testng] [2024-10-11 03:12:47,157] [pool-1-thread-3] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-11 03:13:33,630] [pool-1-thread-2] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-11 03:15:41,867] [pool-1-thread-5] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-11 03:18:05,552] [pool-1-thread-2] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-11 03:18:28,151] [pool-1-thread-2] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-11 03:18:49,832] [pool-1-thread-2] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-11 03:19:10,130] [pool-1-thread-2] Initializing /data/glen/Image0002.oif: [testng] [2024-10-11 03:40:40,288] [pool-1-thread-8] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-11 03:40:50,669] [pool-1-thread-8] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-11 03:41:02,760] [pool-1-thread-8] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-11 03:44:32,129] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] [2024-10-11 03:44:43,757] [pool-1-thread-1] Initializing /data/marc/V0606J.oib: [testng] [2024-10-11 03:45:07,972] [pool-1-thread-1] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] [2024-10-11 03:46:54,168] [pool-1-thread-5] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-11 03:46:58,112] [pool-1-thread-5] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-11 03:47:06,797] [pool-1-thread-1] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] [2024-10-11 03:47:10,574] [pool-1-thread-5] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-11 03:47:16,956] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] [2024-10-11 03:47:20,483] [pool-1-thread-5] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-11 03:47:28,764] [pool-1-thread-1] Initializing /data/johannes/step2.bmp: [testng] [2024-10-11 03:47:30,620] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-11 03:47:33,621] [pool-1-thread-1] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-11 03:47:42,421] [pool-1-thread-5] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-11 03:47:50,698] [pool-1-thread-5] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-11 03:50:07,862] [pool-1-thread-8] Initializing /data/aryeh/030408 2 1.oib: [testng] [2024-10-11 03:50:15,874] [pool-1-thread-8] Initializing /data/david/Image0016.oif: [testng] [2024-10-11 03:53:06,669] [pool-1-thread-8] Initializing /data/molly/11OCT2.OIF: [testng] [2024-10-11 03:54:47,045] [pool-1-thread-1] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-11 03:55:04,898] [pool-1-thread-5] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-11 03:55:35,961] [pool-1-thread-5] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-11 03:56:44,228] [pool-1-thread-5] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-11 03:56:55,639] [pool-1-thread-5] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-11 03:57:08,091] [pool-1-thread-5] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-11 03:57:26,119] [pool-1-thread-5] Initializing /data/karl/Image0009.oib: [testng] [2024-10-11 03:57:38,067] [pool-1-thread-5] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] [2024-10-11 03:57:50,495] [pool-1-thread-5] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-11 03:59:55,469] [pool-1-thread-6] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-11 04:00:07,575] [pool-1-thread-6] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-11 04:00:22,384] [pool-1-thread-6] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-11 04:00:34,482] [pool-1-thread-6] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-11 04:02:22,814] [pool-1-thread-1] Initializing /data/aryeh/1h.oib: [testng] [2024-10-11 04:02:37,312] [pool-1-thread-1] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-11 04:02:48,024] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-11 04:03:01,797] [pool-1-thread-1] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-11 04:03:13,893] [pool-1-thread-1] Initializing /data/brian/FLIP.oib: [testng] [2024-10-11 04:03:25,925] [pool-1-thread-1] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-11 04:03:38,220] [pool-1-thread-1] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-11 04:03:48,236] [pool-1-thread-1] Initializing /data/simon/never_worked.oib: [testng] [2024-10-11 04:03:59,098] [pool-1-thread-1] Initializing /data/johannes/step1.bmp: [testng] [2024-10-11 04:04:03,501] [pool-1-thread-1] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] [2024-10-11 04:04:15,619] [pool-1-thread-1] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-11 04:04:26,829] [pool-1-thread-1] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-11 04:04:37,914] [pool-1-thread-1] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-11 04:05:42,284] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-11 04:05:51,235] [pool-1-thread-7] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-11 04:05:59,797] [pool-1-thread-7] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-11 04:06:11,964] [pool-1-thread-7] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-11 04:06:14,459] [pool-1-thread-4] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-11 04:06:24,380] [pool-1-thread-7] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-11 04:06:35,381] [pool-1-thread-7] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-11 04:06:46,111] [pool-1-thread-7] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-11 04:06:56,189] [pool-1-thread-7] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-11 04:07:06,646] [pool-1-thread-7] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-11 04:07:59,235] [pool-1-thread-7] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-11 04:10:15,467] [pool-1-thread-4] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-11 04:10:20,961] [pool-1-thread-4] Initializing /data/david/Image0016.oib: [testng] [2024-10-11 04:10:23,688] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] 04:10:24,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:10:24,364 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:10:24,365 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-11_04-10-24.log] [testng] 04:10:24,366 |-INFO in ch.qos.logback.core.sift.SiftProcessor@28654a6d - End of configuration. [testng] [2024-10-11 04:10:27,805] [pool-1-thread-4] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-11 04:10:53,362] [pool-1-thread-2] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-11 04:10:59,262] [pool-1-thread-2] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-11 04:11:28,601] [pool-1-thread-3] Initializing /data/allan/62909#1.oib: [testng] [2024-10-11 04:11:34,376] [pool-1-thread-3] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-11 04:15:04,690] [pool-1-thread-12] Initializing /data/glen/simulstack.oif: [testng] [2024-10-11 04:16:17,748] [pool-1-thread-9] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-11 04:16:36,266] [pool-1-thread-9] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-11 04:24:06,456] [pool-1-thread-11] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-11 04:24:16,668] [pool-1-thread-11] Initializing /data/christian/20min.oif: [testng] [2024-10-11 04:25:12,325] [pool-1-thread-11] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-11 04:25:24,212] [pool-1-thread-11] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-11 04:25:58,151] [pool-1-thread-11] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-11 04:28:36,420] [pool-1-thread-11] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-11 04:37:34,192] [pool-1-thread-2] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-11 04:37:45,624] [pool-1-thread-2] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-11 04:37:53,428] [pool-1-thread-2] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-11 04:38:02,899] [pool-1-thread-2] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-11 04:38:08,394] [pool-1-thread-2] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-11 04:38:19,071] [pool-1-thread-2] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-11 04:38:29,376] [pool-1-thread-2] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-11 04:47:31,290] [pool-1-thread-12] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-11 04:48:29,024] [pool-1-thread-12] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-11 04:48:35,697] [pool-1-thread-12] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-11 04:49:05,483] [pool-1-thread-1] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-11 04:49:12,958] [pool-1-thread-1] Initializing /data/johannes/step4.bmp: [testng] [2024-10-11 04:49:16,771] [pool-1-thread-1] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-11 04:49:20,326] [pool-1-thread-1] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-11 04:49:29,728] [pool-1-thread-1] Initializing /data/johannes/step3.bmp: [testng] [2024-10-11 04:49:33,149] [pool-1-thread-1] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-11 04:49:40,304] [pool-1-thread-1] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-11 04:49:58,236] [pool-1-thread-1] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-11 04:50:09,908] [pool-1-thread-5] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-11 04:50:11,239] [pool-1-thread-1] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-11 04:51:27,490] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-11 04:51:33,694] [pool-1-thread-5] Initializing /data/jae/Image0001.oib: [testng] [2024-10-11 04:51:37,276] [pool-1-thread-4] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-11 04:51:42,697] [pool-1-thread-5] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-11 04:53:12,153] [pool-1-thread-4] Initializing /data/marc/V0606L.oib: [testng] [2024-10-11 04:53:34,490] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-11 04:53:50,667] [pool-1-thread-4] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] 05:01:59,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 05:01:59,515 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:01:59,518 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-11_05-01-59.log] [testng] 05:01:59,519 |-INFO in ch.qos.logback.core.sift.SiftProcessor@55ff541a - End of configuration. [testng] 05:09:15,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 05:09:15,027 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:09:15,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-11_05-09-15.log] [testng] 05:09:15,030 |-INFO in ch.qos.logback.core.sift.SiftProcessor@8fc7aaf - End of configuration. [testng] 06:14:05,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 06:14:05,958 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:14:05,960 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-11_06-14-05.log] [testng] 06:14:05,960 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d3cbfd4 - End of configuration. [testng] 06:58:22,671 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 06:58:22,672 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 06:58:22,673 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-11_06-58-22.log] [testng] 06:58:22,673 |-INFO in ch.qos.logback.core.sift.SiftProcessor@258a62dc - End of configuration. [testng] 07:04:16,602 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 07:04:16,602 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:04:16,603 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-11_07-04-16.log] [testng] 07:04:16,604 |-INFO in ch.qos.logback.core.sift.SiftProcessor@d6707ca - End of configuration. [testng] 07:11:39,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 07:11:39,496 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:11:39,497 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-11_07-11-39.log] [testng] 07:11:39,497 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3212ff1b - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 296 minutes 59 seconds Finished: SUCCESS