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Started by upstream project "BIOFORMATS-test-repo" build number 218 originally caused by: Started by upstream project "Trigger" build number 245 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@8 [BIOFORMATS-test-folder@8] $ /bin/bash -xe /tmp/jenkins10151881919860686775.sh + '[' tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_34544_merge_ci -v /uod/idr/repos/curated/tiff:/data -v /uod/idr-scratch/merge-ci/curated/tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:30:09,541 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:30:09,543 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 01:30:09,543 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:30:09,544 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:30:09,544 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:30:09,545 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:30:09,545 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:30:09,545 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:30:09,545 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:30:09,546 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:30:09,546 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:30:09,547 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:30:09,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:30:09,710 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:30:09,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:30:09,732 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:30:09,737 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:30:09,738 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:30:09,738 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:30:09,738 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:30:09,738 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 01:30:09,739 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 01:30:09,739 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 194 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-12 01:30:09,747] [main] java.version = 11.0.16 [testng] 01:30:09,750 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:30:09,751 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:30:09,792 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-12_01-30-09.log] [testng] 01:30:09,793 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-12 01:30:09,795] [main] testng.directory = /data [testng] [2024-10-12 01:30:09,795] [main] testng.configDirectory = /config [testng] [2024-10-12 01:30:09,805] [main] testng.multiplier = 1.0 [testng] [2024-10-12 01:30:09,806] [main] testng.in-memory = false [testng] [2024-10-12 01:30:09,806] [main] testng.allow-missing = false [testng] [2024-10-12 01:30:09,806] [main] user.language = en [testng] [2024-10-12 01:30:09,806] [main] user.country = ${user.country} [testng] [2024-10-12 01:30:09,806] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-12 01:33:39,304] [main] ---------------------------------------- [testng] [2024-10-12 01:33:39,304] [main] Total files: 4426 [testng] [2024-10-12 01:33:39,305] [main] Scan time: 209.498 s (47 ms/file) [testng] [2024-10-12 01:33:39,305] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 722 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-12 02:07:41,587] [pool-1-thread-1] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-32x64.tiff: [testng] 02:07:41,588 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:07:41,589 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:41,591 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-12_02-07-41.log] [testng] 02:07:41,592 |-INFO in ch.qos.logback.core.sift.SiftProcessor@65db2bbb - End of configuration. [testng] [2024-10-12 02:07:43,125] [pool-1-thread-12] Initializing /data/misc/wtembryo.tiff: [testng] 02:07:43,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:07:43,125 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:43,126 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-12_02-07-43.log] [testng] 02:07:43,127 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d50c86f - End of configuration. [testng] [2024-10-12 02:07:44,138] [pool-1-thread-11] Initializing /data/brian/retina/retina_C1_Z022.tif: [testng] 02:07:44,138 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:07:44,138 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:44,139 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-12_02-07-44.log] [testng] 02:07:44,140 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d93413c - End of configuration. [testng] [2024-10-12 02:07:45,291] [pool-1-thread-10] Initializing /data/brian/Alx-488-pk.tif: [testng] 02:07:45,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:07:45,291 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:45,292 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-12_02-07-45.log] [testng] 02:07:45,293 |-INFO in ch.qos.logback.core.sift.SiftProcessor@88757ce - End of configuration. [testng] [2024-10-12 02:07:45,879] [pool-1-thread-9] Initializing /data/josh/jnb1s1_raw0255.TIF: [testng] 02:07:45,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:07:45,880 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:45,880 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-12_02-07-45.log] [testng] 02:07:45,881 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4a92b5d4 - End of configuration. [testng] [2024-10-12 02:07:46,724] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z046.tif: [testng] 02:07:46,725 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:07:46,725 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:46,726 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-12_02-07-46.log] [testng] 02:07:46,726 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1cceeb05 - End of configuration. [testng] [2024-10-12 02:07:47,696] [pool-1-thread-7] Initializing /data/ascb/FND-15_PorterFast_4800.tif: [testng] 02:07:47,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:07:47,696 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:47,697 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-12_02-07-47.log] [testng] 02:07:47,697 |-INFO in ch.qos.logback.core.sift.SiftProcessor@48eec7df - End of configuration. [testng] [2024-10-12 02:07:50,504] [pool-1-thread-6] Initializing /data/public/libtiff/oxford.tif: [testng] 02:07:50,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:07:50,504 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:50,505 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-12_02-07-50.log] [testng] 02:07:50,505 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4f304872 - End of configuration. [testng] [2024-10-12 02:07:51,369] [pool-1-thread-5] Initializing /data/brian/Ch1_fld1.tif: [testng] 02:07:51,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:07:51,369 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:51,370 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-12_02-07-51.log] [testng] 02:07:51,370 |-INFO in ch.qos.logback.core.sift.SiftProcessor@30b8f392 - End of configuration. [testng] [2024-10-12 02:07:52,334] [pool-1-thread-4] Initializing /data/josiah/cell-Z17.C0.tiff: [testng] 02:07:52,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:07:52,335 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:52,335 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-12_02-07-52.log] [testng] 02:07:52,336 |-INFO in ch.qos.logback.core.sift.SiftProcessor@53858bc5 - End of configuration. [testng] [2024-10-12 02:07:53,733] [pool-1-thread-3] Initializing /data/brian/PlantCell/PlantCell_C0_Z034.tif: [testng] 02:07:53,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:07:53,733 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:53,734 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-12_02-07-53.log] [testng] 02:07:53,734 |-INFO in ch.qos.logback.core.sift.SiftProcessor@69f98597 - End of configuration. [testng] [2024-10-12 02:07:55,251] [pool-1-thread-2] Initializing /data/jae/first image.tif: [testng] 02:07:55,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:07:55,252 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:07:55,253 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-12_02-07-55.log] [testng] 02:07:55,253 |-INFO in ch.qos.logback.core.sift.SiftProcessor@42f6d403 - End of configuration. [testng] [2024-10-12 02:08:06,598] [pool-1-thread-11] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-48x48.tiff: [testng] [2024-10-12 02:08:07,639] [pool-1-thread-8] Initializing /data/samples/melissa/imagej-units/1000cmx1000cm-test.tif: [testng] [2024-10-12 02:08:09,239] [pool-1-thread-1] Initializing /data/josiah/cell-Z16.C1.tiff: [testng] [2024-10-12 02:08:10,738] [pool-1-thread-3] Initializing /data/big-images/2kx2k.tif: [testng] [2024-10-12 02:08:12,517] [pool-1-thread-2] Initializing /data/josiah/cell-Z9.C0.tiff: [testng] [2024-10-12 02:08:14,124] [pool-1-thread-6] Initializing /data/kevino/_BF_00000.tif: [testng] [2024-10-12 02:08:15,536] [pool-1-thread-4] Initializing /data/josiah/cell-Z10.C0.tiff: [testng] [2024-10-12 02:08:17,138] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z040.tif: [testng] [2024-10-12 02:08:18,606] [pool-1-thread-12] Initializing /data/josiah/cell-Z6.C1.tiff: [testng] [2024-10-12 02:08:20,268] [pool-1-thread-9] Initializing /data/josiah/cell-Z20.C0.tiff: [testng] [2024-10-12 02:08:31,993] [pool-1-thread-11] Initializing /data/public/condensation/E4.pattern7.tif: [testng] [2024-10-12 02:08:34,010] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z041.tif: [testng] [2024-10-12 02:08:35,470] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0232.TIF: [testng] [2024-10-12 02:08:36,913] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z048.tif: [testng] [2024-10-12 02:08:38,336] [pool-1-thread-8] Initializing /data/josiah/cell-Z36.C0.tiff: [testng] [2024-10-12 02:08:39,734] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x64.tiff: [testng] [2024-10-12 02:08:42,080] [pool-1-thread-9] Initializing /data/public/libtiff/jim___gg.tif: [testng] [2024-10-12 02:08:44,421] [pool-1-thread-1] Initializing /data/kevino/_BF_00004.tif: [testng] [2024-10-12 02:08:46,317] [pool-1-thread-12] Initializing /data/brian/PlantCell/PlantCell_C1_Z007.tif: [testng] [2024-10-12 02:08:48,220] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0212.TIF: [testng] [2024-10-12 02:08:50,487] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C0_Z017.tif: [testng] [2024-10-12 02:09:02,469] [pool-1-thread-5] Initializing /data/wayne/mBoeglin_lzw/mm_7.1.2.0.tif: [testng] [2024-10-12 02:09:03,824] [pool-1-thread-2] Initializing /data/unknown/epsImgColony.tif: [testng] [2024-10-12 02:09:05,608] [pool-1-thread-6] Initializing /data/public/condensation/B12.pattern2.tif: [testng] [2024-10-12 02:09:08,412] [pool-1-thread-10] Initializing /data/josiah/cell-Z6.C0.tiff: [testng] [2024-10-12 02:09:09,986] [pool-1-thread-12] Initializing /data/glen/742015a20x3middle16bit.tif: [testng] [2024-10-12 02:09:12,097] [pool-1-thread-11] Initializing /data/brian/retina/retina_C0_Z005.tif: [testng] [2024-10-12 02:09:14,038] [pool-1-thread-4] Initializing /data/brian/PlantCell/PlantCell_C0_Z031.tif: [testng] [2024-10-12 02:09:16,318] [pool-1-thread-8] Initializing /data/ascb/CYT-91_PasolliMouse1a_4800.tif: [testng] [2024-10-12 02:09:18,543] [pool-1-thread-9] Initializing /data/tom/TLD - n000000_Stamp.tif: [testng] [2024-10-12 02:09:20,604] [pool-1-thread-1] Initializing /data/public/libtiff/cramps.tif: [testng] [2024-10-12 02:09:22,465] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z055.tif: [testng] [2024-10-12 02:09:23,926] [pool-1-thread-7] Initializing /data/imagesc-50416/_Fadeh_Alonzy_OD_Lower__M5_A8_F950nmD_I022_20130424115201.tiff: [testng] [2024-10-12 02:09:36,321] [pool-1-thread-5] Initializing /data/tom-kazimiers/test_noexiftool.tiff: [testng] [2024-10-12 02:09:37,982] [pool-1-thread-3] Initializing /data/tamjid/Image_843.tif: [testng] [2024-10-12 02:09:39,554] [pool-1-thread-11] Initializing /data/koen/nt3_cortex_rots_thresh45.tif: [testng] [2024-10-12 02:09:41,141] [pool-1-thread-9] Initializing /data/damian/36m.tiff: [testng] [2024-10-12 02:09:42,942] [pool-1-thread-4] Initializing /data/ascb/CYT-49_FriendSecretoryPair_4800.tif: [testng] [2024-10-12 02:09:44,519] [pool-1-thread-1] Initializing /data/josh/jnb1s1_raw0257.TIF: [testng] [2024-10-12 02:09:46,108] [pool-1-thread-12] Initializing /data/josiah/cell-Z19.C1.tiff: [testng] [2024-10-12 02:09:47,629] [pool-1-thread-7] Initializing /data/ascb/FND-10_PorterMitochondria_4800.tif: [testng] [2024-10-12 02:09:49,946] [pool-1-thread-2] Initializing /data/ascb/CYT-77_PasolliMouse2_4800.tif: [testng] [2024-10-12 02:09:51,820] [pool-1-thread-6] Initializing /data/josiah/cell-Z23.C1.tiff: [testng] [2024-10-12 02:09:52,942] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z007.tif: [testng] [2024-10-12 02:09:55,295] [pool-1-thread-8] Initializing /data/public/condensation/C4.pattern5.tif: [testng] [2024-10-12 02:10:02,899] [pool-1-thread-5] Initializing /data/qa-17411/_t20271.tif: [testng] [2024-10-12 02:10:06,647] [pool-1-thread-10] Initializing 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[testng] [2024-10-12 02:29:36,337] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z012.tif: [testng] [2024-10-12 02:29:37,001] [pool-1-thread-12] Initializing /data/public/condensation/A6.pattern3.tif: [testng] [2024-10-12 02:29:38,106] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C1_Z015.tif: [testng] [2024-10-12 02:29:43,206] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z019.tif: [testng] [2024-10-12 02:29:45,134] [pool-1-thread-3] Initializing /data/josh/jnb1s1_raw0205.TIF: [testng] [2024-10-12 02:29:47,900] [pool-1-thread-11] Initializing /data/julien/Chadisoukkarieh6.TIF: [testng] [2024-10-12 02:29:49,334] [pool-1-thread-2] Initializing /data/misc/9 h test.tif: [testng] [2024-10-12 02:29:49,652] [pool-1-thread-12] Initializing /data/ascb/FND-1_PorterClaudeFullamFirst_4800.tif: [testng] [2024-10-12 02:29:51,629] [pool-1-thread-8] Initializing /data/josh/jnb1s1_raw0235.TIF: [testng] [2024-10-12 02:29:53,063] [pool-1-thread-4] Initializing /data/michael/MFISH.tiff: [testng] [2024-10-12 02:29:54,431] [pool-1-thread-1] Initializing /data/public/libtiff/quad-tile.tif: [testng] [2024-10-12 02:29:55,247] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z054.tif: [testng] [2024-10-12 02:29:56,371] [pool-1-thread-5] Initializing /data/brian/retina/retina_C0_Z052.tif: [testng] [2024-10-12 02:29:58,100] [pool-1-thread-6] Initializing /data/josiah/cell-Z35.C0.tiff: [testng] [2024-10-12 02:30:05,132] [pool-1-thread-2] Initializing /data/brian/retina/retina_C0_Z017.tif: [testng] [2024-10-12 02:30:06,145] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0258.TIF: [testng] [2024-10-12 02:30:09,058] [pool-1-thread-3] Initializing /data/stephane/P014.tif: [testng] [2024-10-12 02:30:11,066] [pool-1-thread-9] Initializing /data/ascb/bad/FND-17_FawcettNucleus_4800.tif: [testng] [2024-10-12 02:30:13,972] [pool-1-thread-5] Initializing /data/josiah/cell-Z24.C1.tiff: [testng] [2024-10-12 02:30:15,228] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z025.tif: [testng] [2024-10-12 02:30:16,358] [pool-1-thread-11] Initializing /data/josiah/cell-Z29.C0.tiff: [testng] [2024-10-12 02:30:18,795] [pool-1-thread-6] Initializing /data/josiah/cell-Z30.C0.tiff: [testng] [2024-10-12 02:30:23,464] [pool-1-thread-8] Initializing /data/sub-resolution/Leica-3/Leica-3-subifds.tiff: [testng] [2024-10-12 02:30:27,797] [pool-1-thread-4] Initializing /data/misc/mri-new.mov: [testng] [2024-10-12 02:30:28,844] [pool-1-thread-12] Initializing /data/julien/baldindq-OVA.TIF: [testng] [2024-10-12 02:30:31,191] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z058.tif: [testng] [2024-10-12 02:30:36,684] [pool-1-thread-4] Initializing /data/josh/NESb_C2_TP3.tiff: [testng] [2024-10-12 02:30:38,463] [pool-1-thread-2] Initializing /data/josiah/cell-Z3.C0.tiff: [testng] [2024-10-12 02:30:39,456] [pool-1-thread-10] Initializing /data/brian/retina/retina_C1_Z057.tif: [testng] [2024-10-12 02:30:40,256] [pool-1-thread-3] Initializing /data/brian/retina/retina_C1_Z061.tif: [testng] [2024-10-12 02:30:43,104] [pool-1-thread-7] Initializing /data/brian/PlantCell/PlantCell_C1_Z031.tif: [testng] [2024-10-12 02:30:45,167] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z032.tif: [testng] [2024-10-12 02:30:46,510] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0227.TIF: [testng] [2024-10-12 02:30:47,723] [pool-1-thread-6] Initializing /data/misc/mri-old.mov: [testng] [2024-10-12 02:30:47,940] [pool-1-thread-5] Initializing /data/carolyn/tumor_1.tif: [testng] [2024-10-12 02:30:48,779] [pool-1-thread-12] Initializing /data/kevino/_BF_00003.tif: [testng] [2024-10-12 02:30:50,648] [pool-1-thread-2] Initializing /data/public/libtiff/cramps-tile.tif: [testng] [2024-10-12 02:30:51,614] [pool-1-thread-4] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs009.TIF: [testng] [2024-10-12 02:30:53,815] [pool-1-thread-6] Initializing 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/data/brian/PlantCell/PlantCell_C1_Z018.tif: [testng] [2024-10-12 02:31:11,170] [pool-1-thread-4] Initializing /data/damian/18m.tiff: [testng] [2024-10-12 02:31:12,319] [pool-1-thread-10] Initializing /data/jacques/20110629-Spat-1_1.tif: [testng] [2024-10-12 02:31:14,937] [pool-1-thread-7] Initializing /data/josiah/cell-Z24.C0.tiff: [testng] [2024-10-12 02:31:15,902] [pool-1-thread-6] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-16x16.tiff: [testng] [2024-10-12 02:31:16,638] [pool-1-thread-3] Initializing /data/public/cellprofiler/fruit-fly-cells/POS218.pattern/POS218.pattern: [testng] [2024-10-12 02:31:25,129] [pool-1-thread-5] Initializing /data/paulh/quickpollen4_w2_t1.tif: [testng] [2024-10-12 02:31:26,608] [pool-1-thread-1] Initializing /data/tom-kazimiers/test_exiftool2_resave2.tiff: [testng] [2024-10-12 02:31:27,843] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z027.tif: [testng] [2024-10-12 02:31:28,812] [pool-1-thread-2] Initializing /data/josh/jnb1s1_raw0219.TIF: [testng] [2024-10-12 02:31:30,052] [pool-1-thread-11] Initializing /data/julien/Chadisoukkarieh.TIF: [testng] [2024-10-12 02:31:31,234] [pool-1-thread-6] Initializing /data/jerome/e346_plt1(m)_F1-6.tif: [testng] [2024-10-12 02:31:32,886] [pool-1-thread-8] Initializing /data/josiah/cell-Z37.C0.tiff: [testng] [2024-10-12 02:31:33,883] [pool-1-thread-12] Initializing /data/brian/retina/retina_C0_Z061.tif: [testng] [2024-10-12 02:31:34,253] [pool-1-thread-4] Initializing /data/jayne/Zst_47/WTZER_Series47_z000_ch00.tif: [testng] [2024-10-12 02:31:38,258] [pool-1-thread-7] Initializing /data/brian/retina/retina_C0_Z009.tif: [testng] [2024-10-12 02:31:44,543] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C1_Z032.tif: [testng] [2024-10-12 02:31:45,657] [pool-1-thread-1] Initializing /data/josiah/cell-Z15.C1.tiff: [testng] [2024-10-12 02:31:46,822] [pool-1-thread-5] Initializing /data/stephane/test sortie_t0000_z0000.tif: [testng] [2024-10-12 02:31:48,262] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-strips-01.tiff: [testng] [2024-10-12 02:31:49,398] [pool-1-thread-7] Initializing /data/public/condensation/A5.pattern1.tif: [testng] [2024-10-12 02:31:50,359] [pool-1-thread-8] Initializing /data/brian/PlantCell/PlantCell_C0_Z032.tif: [testng] [2024-10-12 02:31:51,871] [pool-1-thread-11] Initializing /data/misc/ms-paint.png: [testng] [2024-10-12 02:31:52,379] [pool-1-thread-6] Initializing /data/josiah/cell-Z29.C1.tiff: [testng] [2024-10-12 02:31:53,056] [pool-1-thread-2] Initializing /data/josiah/cell-Z21.C0.tiff: [testng] [2024-10-12 02:31:56,469] [pool-1-thread-11] Initializing /data/josh/jnb1s1_raw0204.TIF: [testng] [2024-10-12 02:31:58,497] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z024.tif: [testng] [2024-10-12 02:32:08,936] [pool-1-thread-5] Initializing /data/chris-lesiak/half-float.tiff: [testng] [2024-10-12 02:32:10,827] [pool-1-thread-6] Initializing /data/brian/PlantCell/PlantCell_C0_Z026.tif: [testng] [2024-10-12 02:32:13,181] [pool-1-thread-2] Initializing /data/josh/stack.tif: [testng] [2024-10-12 02:32:14,480] [pool-1-thread-1] Initializing /data/brian/retina/retina_C0_Z046.tif: [testng] [2024-10-12 02:32:15,728] [pool-1-thread-8] Initializing /data/stephane/Copy of listeria + clathrin1_w3Cy5.tif: [testng] [2024-10-12 02:32:17,059] [pool-1-thread-9] Initializing /data/josh/NESa_C2_TP1.tiff: [testng] [2024-10-12 02:32:19,548] [pool-1-thread-12] Initializing /data/curtis/itk/MG63_0_1.tif: [testng] [2024-10-12 02:32:21,455] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0239.TIF: [testng] [2024-10-12 02:32:24,000] [pool-1-thread-11] Initializing /data/brian/PlantCell/PlantCell_C1_Z035.tif: [testng] [2024-10-12 02:32:25,758] [pool-1-thread-10] Initializing /data/josiah/cell-Z36.C1.tiff: [testng] [2024-10-12 02:32:32,658] [pool-1-thread-8] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs010.TIF: [testng] [2024-10-12 02:32:34,263] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z045.tif: [testng] [2024-10-12 02:32:36,101] [pool-1-thread-6] Initializing /data/alla/deconvolve6/deconvolve6_Pseudo_Tl000_Zs014.TIF: [testng] [2024-10-12 02:32:38,296] [pool-1-thread-2] Initializing /data/stephane/Fluid Dynamics.tif: [testng] [2024-10-12 02:32:39,840] [pool-1-thread-12] Initializing /data/josiah/cell-Z13.C0.tiff: [testng] [2024-10-12 02:32:41,625] [pool-1-thread-9] Initializing /data/brian/retina/retina_C0_Z032.tif: [testng] [2024-10-12 02:32:43,114] [pool-1-thread-11] Initializing /data/pavel/Dmel/full.pattern: [testng] [2024-10-12 02:39:11,129] [pool-1-thread-5] Initializing /data/brian/retina/retina_C1_Z055.tif: [testng] [2024-10-12 02:39:14,247] [pool-1-thread-7] Initializing /data/josiah/cell-Z13.C1.tiff: [testng] [2024-10-12 02:39:17,233] [pool-1-thread-3] Initializing /data/public/libtiff/quad-jpeg.tif: [testng] [2024-10-12 02:39:25,610] [pool-1-thread-10] Initializing /data/brian/PlantCell/PlantCell_C0_Z019.tif: [testng] [2024-10-12 02:39:32,805] [pool-1-thread-2] Initializing /data/qa-4017/Artificial_xyt_8bit.tif: [testng] [2024-10-12 02:39:39,910] [pool-1-thread-4] Initializing /data/ascb/CYT-57_HowellClatharinDetails_4800.tif: [testng] [2024-10-12 02:39:41,856] [pool-1-thread-12] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-60.tiff: [testng] [2024-10-12 02:39:43,397] [pool-1-thread-5] Initializing /data/carolyn/tumor_2.tif: [testng] [2024-10-12 02:39:44,049] [pool-1-thread-1] Initializing /data/ascb/CYT-44_HowellAcinarLabeled_4800.tif: [testng] [2024-10-12 02:39:48,668] [pool-1-thread-8] Initializing /data/brian/retina/retina_C1_Z017.tif: [testng] [2024-10-12 02:39:53,667] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x48.tiff: [testng] [2024-10-12 02:39:54,351] [pool-1-thread-9] Initializing /data/brian/PlantCell/PlantCell_C0_Z001.tif: [testng] [2024-10-12 02:39:55,729] [pool-1-thread-6] Initializing /data/carolyn/tumor_4.tif: [testng] [2024-10-12 02:39:57,005] [pool-1-thread-3] Initializing /data/josiah/cell-Z5.C0.tiff: [testng] [2024-10-12 02:40:01,919] [pool-1-thread-10] Initializing /data/samples/tiling-variants/data-layout-64x64-planar-tiles-64x32.tiff: [testng] [2024-10-12 02:40:04,861] [pool-1-thread-2] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-tiles-64x32.tiff: [testng] [2024-10-12 02:40:06,783] [pool-1-thread-7] Initializing /data/josh/jnb1s1_raw0236.TIF: [testng] [2024-10-12 02:40:08,720] [pool-1-thread-12] Initializing /data/josiah/cell-Z22.C1.tiff: [testng] [2024-10-12 02:40:10,101] [pool-1-thread-9] Initializing /data/samples/cielab/Ski_TC8-03_sRGB_lab.tif: [testng] [2024-10-12 02:40:11,306] [pool-1-thread-8] Initializing /data/chris-wood/ticket-10050/cjw_stowers.tif: [testng] [2024-10-12 02:40:12,487] [pool-1-thread-5] Initializing /data/josiah/cell-Z0.C0.tiff: [testng] [2024-10-12 02:40:13,140] [pool-1-thread-6] Initializing /data/ascb/bad/FND-16_FawcettPrincipal_4800.tif: [testng] [2024-10-12 02:40:13,701] [pool-1-thread-3] Initializing /data/brian/retina/retina_C0_Z006.tif: [testng] [2024-10-12 02:40:15,358] [pool-1-thread-10] Initializing /data/brian/retina/retina_C0_Z026.tif: [testng] [2024-10-12 02:40:15,938] [pool-1-thread-4] Initializing /data/public/condensation/E4.pattern6.tif: [testng] [2024-10-12 02:40:17,045] [pool-1-thread-1] Initializing /data/damian/damian.tif: [testng] [2024-10-12 02:40:21,836] [pool-1-thread-2] Initializing /data/ascb/FND-24_GeorgeEPalade.tif: [testng] [2024-10-12 02:40:24,383] [pool-1-thread-5] Initializing /data/david/100umbeads_stack.tif: [testng] [2024-10-12 02:40:25,930] [pool-1-thread-7] Initializing /data/samples/tiling-variants/data-layout-64x64-chunky-strips-01.tiff: [testng] [2024-10-12 02:40:26,682] [pool-1-thread-12] Initializing /data/josh/jnb1s1_raw0244.TIF: [testng] [2024-10-12 02:40:27,524] [pool-1-thread-3] Initializing /data/josiah/cell-Z34.C1.tiff: [testng] [2024-10-12 02:40:28,988] [pool-1-thread-4] Initializing /data/brian/retina/retina_C1_Z002.tif: [testng] [2024-10-12 02:40:29,625] [pool-1-thread-10] Initializing /data/josh/jnb1s1_raw0246.TIF: [testng] [2024-10-12 02:40:31,529] [pool-1-thread-1] Initializing /data/brian/retina/retina_C1_Z028.tif: [testng] [2024-10-12 02:40:35,861] [pool-1-thread-9] Initializing /data/brian/datamanager.tiff: [testng] [2024-10-12 02:40:37,910] [pool-1-thread-4] Initializing /data/brian/retina/retina_C0_Z051.tif: [testng] [2024-10-12 02:40:38,922] [pool-1-thread-7] Initializing /data/qa-4968/twocars2.tif: [testng] [2024-10-12 02:40:41,047] [pool-1-thread-3] Initializing /data/public/condensation/E4.pattern9.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 38266, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 71 minutes 52 seconds Finished: SUCCESS