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Started by upstream project "BIOFORMATS-test-repo" build number 220 originally caused by: Started by upstream project "Trigger" build number 247 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@5 [BIOFORMATS-test-folder@5] $ /bin/bash -xe /tmp/jenkins12085061101076981634.sh + '[' gatan = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_34863_merge_ci -v /uod/idr/repos/curated/gatan:/data -v /uod/idr-scratch/merge-ci/curated/gatan:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 01:27:00,904 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:27:00,906 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 01:27:00,906 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:27:00,907 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:27:00,907 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:27:00,907 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:27:00,908 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:27:00,908 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:27:00,908 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:27:00,909 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:27:00,909 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:27:00,909 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:27:01,143 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:27:01,144 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:27:01,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:27:01,173 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:27:01,181 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:27:01,181 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:27:01,182 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:27:01,182 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:27:01,182 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 01:27:01,183 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 01:27:01,183 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 275 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-14 01:27:01,194] [main] java.version = 1.8.0_342 [testng] 01:27:01,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:27:01,198 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:01,242 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-14_01-27-01.log] [testng] 01:27:01,243 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-14 01:27:01,245] [main] testng.directory = /data [testng] [2024-10-14 01:27:01,245] [main] testng.configDirectory = /config [testng] [2024-10-14 01:27:01,257] [main] testng.multiplier = 1.0 [testng] [2024-10-14 01:27:01,258] [main] testng.in-memory = false [testng] [2024-10-14 01:27:01,258] [main] testng.allow-missing = false [testng] [2024-10-14 01:27:01,258] [main] user.language = fr [testng] [2024-10-14 01:27:01,258] [main] user.country = FR [testng] [2024-10-14 01:27:01,258] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-14 01:27:05,783] [main] ---------------------------------------- [testng] [2024-10-14 01:27:05,784] [main] Total files: 103 [testng] [2024-10-14 01:27:05,784] [main] Scan time: 4.525 s (43 ms/file) [testng] [2024-10-14 01:27:05,784] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 98 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-14 01:27:22,701] [pool-1-thread-1] Initializing /data/melissa/annotation-test.dm3: [testng] 01:27:22,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:27:22,702 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:22,703 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-14_01-27-22.log] [testng] 01:27:22,704 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1292fb19 - End of configuration. [testng] [2024-10-14 01:27:22,765] [pool-1-thread-12] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-256x256.tif: [testng] 01:27:22,765 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:27:22,765 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:22,766 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-14_01-27-22.log] [testng] 01:27:22,766 |-INFO in ch.qos.logback.core.sift.SiftProcessor@561da817 - End of configuration. [testng] [2024-10-14 01:27:23,211] [pool-1-thread-11] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0013.dm4: [testng] 01:27:23,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:27:23,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:23,212 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-14_01-27-23.log] [testng] 01:27:23,212 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7460261a - End of configuration. [testng] [2024-10-14 01:27:23,286] [pool-1-thread-10] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] 01:27:23,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:27:23,287 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:23,288 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-14_01-27-23.log] [testng] 01:27:23,288 |-INFO in ch.qos.logback.core.sift.SiftProcessor@112323ba - End of configuration. [testng] [2024-10-14 01:27:23,822] [pool-1-thread-9] Initializing /data/jayne/AM-2/MonGb3-S1.dm3: [testng] 01:27:23,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:27:23,822 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:23,823 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-14_01-27-23.log] [testng] 01:27:23,824 |-INFO in ch.qos.logback.core.sift.SiftProcessor@bc45bba - End of configuration. [testng] [2024-10-14 01:27:23,888] [pool-1-thread-8] Initializing /data/jay/camtest1.dm3: [testng] 01:27:23,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:27:23,888 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:23,889 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-14_01-27-23.log] [testng] 01:27:23,889 |-INFO in ch.qos.logback.core.sift.SiftProcessor@54b408a5 - End of configuration. [testng] [2024-10-14 01:27:24,029] [pool-1-thread-7] Initializing /data/qa-11392/Example_Gatan_File.dm4: [testng] 01:27:24,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:27:24,029 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:24,030 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-14_01-27-24.log] [testng] 01:27:24,031 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7461f431 - End of configuration. [testng] [2024-10-14 01:27:24,117] [pool-1-thread-6] Initializing /data/ofra/Co on INT 28-12-10.11.dm3: [testng] 01:27:24,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:27:24,117 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:24,118 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-14_01-27-24.log] [testng] 01:27:24,118 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1b7f8c7f - End of configuration. [testng] [2024-10-14 01:27:24,250] [pool-1-thread-5] Initializing /data/public/imagesc-36590/SmallMontage0007.dm4: [testng] 01:27:24,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:27:24,250 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:24,250 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-14_01-27-24.log] [testng] 01:27:24,251 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3a5f73fd - End of configuration. [testng] [2024-10-14 01:27:24,322] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0048.dm4: [testng] 01:27:24,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:27:24,323 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:24,323 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-14_01-27-24.log] [testng] 01:27:24,323 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f8180e0 - End of configuration. [testng] [2024-10-14 01:27:24,481] [pool-1-thread-3] Initializing /data/qa-21761/example.dm4: [testng] 01:27:24,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:27:24,481 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:24,481 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-14_01-27-24.log] [testng] 01:27:24,482 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5e314d56 - End of configuration. [testng] [2024-10-14 01:27:24,560] [pool-1-thread-2] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-363.dm3: [testng] 01:27:24,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:27:24,561 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:24,561 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-14_01-27-24.log] [testng] 01:27:24,562 |-INFO in ch.qos.logback.core.sift.SiftProcessor@be735ce - End of configuration. [testng] [2024-10-14 01:27:28,117] [pool-1-thread-1] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-96x96.tif: [testng] [2024-10-14 01:27:28,804] [pool-1-thread-5] Initializing /data/jay/samples/APC2a-e3.dm3: [testng] [2024-10-14 01:27:28,873] [pool-1-thread-3] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0045.dm4: [testng] [2024-10-14 01:27:28,947] [pool-1-thread-6] Initializing /data/jayne/AM-2/MonGb2-S9.dm3: [testng] [2024-10-14 01:27:29,914] [pool-1-thread-11] Initializing /data/public/imagesc-36590/SmallMontage0001.dm4: [testng] [2024-10-14 01:27:31,331] [pool-1-thread-5] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-14 01:27:32,175] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0014.dm4: [testng] [2024-10-14 01:27:32,292] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0005.dm4: [testng] [2024-10-14 01:27:32,468] [pool-1-thread-8] Initializing /data/public/imagesc-36590/SmallMontage0003.dm4: [testng] [2024-10-14 01:27:32,623] [pool-1-thread-12] Initializing /data/jayne/AM-2/MonGb3-S3.dm3: [testng] [2024-10-14 01:27:32,785] [pool-1-thread-11] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-480x480.tif: [testng] [2024-10-14 01:27:34,171] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0003.dm4: [testng] [2024-10-14 01:27:34,776] [pool-1-thread-6] Initializing /data/public/imagesc-36590/SmallMontage0004.dm4: [testng] [2024-10-14 01:27:35,124] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0004.dm4: [testng] [2024-10-14 01:27:35,252] [pool-1-thread-2] Initializing /data/nuno/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-14 01:27:35,980] [pool-1-thread-1] Initializing /data/jay/dnasample1.dm3: [testng] [2024-10-14 01:27:36,490] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0018.dm4: [testng] [2024-10-14 01:27:36,608] [pool-1-thread-6] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0047.dm4: [testng] [2024-10-14 01:27:37,211] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0005.dm4: [testng] [2024-10-14 01:27:37,338] [pool-1-thread-7] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.tif: [testng] [2024-10-14 01:27:37,975] [pool-1-thread-2] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-799x799.tif: [testng] [2024-10-14 01:27:39,247] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0000.dm4: [testng] [2024-10-14 01:27:39,520] [pool-1-thread-12] Initializing /data/jay/biosamplefullframe.dm3: [testng] [2024-10-14 01:27:40,184] [pool-1-thread-11] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0046.dm4: [testng] [2024-10-14 01:27:41,251] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0007.dm4: [testng] [2024-10-14 01:27:41,811] [pool-1-thread-10] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0009.dm4: [testng] [2024-10-14 01:27:42,956] [pool-1-thread-1] Initializing /data/imagesc-3719/Prefix_BSE_slice_0001.dm4: [testng] [2024-10-14 01:27:43,096] [pool-1-thread-8] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0049.dm4: [testng] [2024-10-14 01:27:44,636] [pool-1-thread-7] Initializing /data/nuno/Prefix_3VBSED_stack_30_slice_0290.dm3: [testng] [2024-10-14 01:27:44,929] [pool-1-thread-5] Initializing /data/qa-21647/Sample2_L1-0002.dm4: [testng] [2024-10-14 01:27:46,065] [pool-1-thread-9] Initializing /data/ofra/lowloss.dm3: [testng] [2024-10-14 01:27:46,214] [pool-1-thread-2] Initializing /data/jay/smallerfile.dm3: [testng] [2024-10-14 01:27:46,339] [pool-1-thread-10] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.tif: [testng] [2024-10-14 01:27:47,211] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0019.dm4: [testng] [2024-10-14 01:27:48,185] [pool-1-thread-9] Initializing /data/melissa/annotation-test.tif: [testng] [2024-10-14 01:27:48,843] [pool-1-thread-4] Initializing /data/public/imagesc-36590/SmallMontage0006.dm4: [testng] [2024-10-14 01:27:49,072] [pool-1-thread-5] Initializing /data/jayne/AM-2/MonGb2-S7.dm3: [testng] [2024-10-14 01:27:50,752] [pool-1-thread-2] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0002.dm4: [testng] [2024-10-14 01:27:51,468] [pool-1-thread-4] Initializing /data/chip/Nanogold-1.dm3: [testng] [2024-10-14 01:27:52,094] [pool-1-thread-12] Initializing /data/jay/samples/APC2a-e4.tif: [testng] [2024-10-14 01:27:52,892] [pool-1-thread-3] Initializing /data/jay/recAmaghi.dm3: [testng] [2024-10-14 01:27:54,099] [pool-1-thread-2] Initializing /data/public/imagesc-36590/SmallMontage0000.dm4: [testng] [2024-10-14 01:27:54,202] [pool-1-thread-9] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0008.dm4: [testng] [2024-10-14 01:27:54,278] [pool-1-thread-5] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.dm3: [testng] [2024-10-14 01:27:54,862] [pool-1-thread-4] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-362.tif: [testng] [2024-10-14 01:27:56,163] [pool-1-thread-2] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0052.dm4: [testng] [2024-10-14 01:27:56,465] [pool-1-thread-7] Initializing /data/qa-8007/Prefix_3VBSED_slice_0011.dm3: [testng] [2024-10-14 01:27:57,132] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0017.dm4: [testng] [2024-10-14 01:27:57,262] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0016.dm4: [testng] [2024-10-14 01:27:57,785] [pool-1-thread-9] Initializing /data/public/imagesc-36590/SmallMontage0002.dm4: [testng] [2024-10-14 01:27:58,140] [pool-1-thread-10] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0050.dm4: [testng] [2024-10-14 01:27:58,336] [pool-1-thread-6] Initializing /data/sindhu/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-14 01:27:59,853] [pool-1-thread-7] Initializing /data/jay/samples/APC2a-e4.dm3: [testng] [2024-10-14 01:28:00,020] [pool-1-thread-9] Initializing /data/jay/DMtest2.dm3: [testng] [2024-10-14 01:28:00,104] [pool-1-thread-1] Initializing /data/sindhu/cropped/JC76-G1-80000.0V-15000X-Sindhu-362-1020x1020.tif: [testng] [2024-10-14 01:28:01,018] [pool-1-thread-5] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0051.dm4: [testng] [2024-10-14 01:28:01,360] [pool-1-thread-11] Initializing /data/samples/test-tiles.dm3: [testng] [2024-10-14 01:28:01,594] [pool-1-thread-3] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0006.dm4: [testng] [2024-10-14 01:28:01,966] [pool-1-thread-12] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-360.tif: [testng] [2024-10-14 01:28:04,698] [pool-1-thread-11] Initializing /data/jay/ViewDMtest.dm3: [testng] [2024-10-14 01:28:04,923] [pool-1-thread-7] Initializing /data/thorsten/60kx_HAADF_03.dm3: [testng] [2024-10-14 01:28:05,957] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0011.dm4: [testng] [2024-10-14 01:28:06,929] [pool-1-thread-4] Initializing /data/jay/samples/APC2a-e5.dm3: [testng] [2024-10-14 01:28:07,029] [pool-1-thread-7] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0001.dm4: [testng] [2024-10-14 01:28:07,143] [pool-1-thread-3] Initializing /data/public/EMPIAR/EMPIAR-10013/BGal_000438_frames.dm4: [testng] [2024-10-14 01:28:07,899] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e5.tif: [testng] [2024-10-14 01:28:08,648] [pool-1-thread-1] Initializing /data/jayne/AM-2/MonGb2-S8.dm3: [testng] [2024-10-14 01:28:10,350] [pool-1-thread-8] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0015.dm4: [testng] [2024-10-14 01:28:10,615] [pool-1-thread-4] Initializing /data/public/imagesc-36590/191041a_ctl_M2_3VBSED_0053.dm4: [testng] [2024-10-14 01:28:10,824] [pool-1-thread-11] Initializing /data/sindhu/8bit/JC76-G1-80000.0V-15000X-Sindhu-362-smaller.tif: [testng] [2024-10-14 01:28:11,467] [pool-1-thread-6] Initializing /data/jay/Carbon.34.dm3: [testng] [2024-10-14 01:28:11,582] [pool-1-thread-7] Initializing /data/jay/dnasample.tif: [testng] [2024-10-14 01:28:13,987] [pool-1-thread-1] Initializing /data/imagesc-3719/Heart_BSE_slice_0019.dm4: [testng] [2024-10-14 01:28:14,314] [pool-1-thread-8] Initializing /data/jay/DMtest.dm3: [testng] [2024-10-14 01:28:14,496] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0010.dm4: [testng] [2024-10-14 01:28:14,767] [pool-1-thread-3] Initializing /data/samples/mode-metadata/mode_format_test.dm3: [testng] [2024-10-14 01:28:15,224] [pool-1-thread-9] Initializing /data/jay/samples/APC2a-e3.tif: [testng] [2024-10-14 01:28:16,781] [pool-1-thread-2] Initializing /data/sindhu/resampled/JC76-G1-80000.0V-15000X-Sindhu-362-128x128.tif: [testng] [2024-10-14 01:28:17,861] [pool-1-thread-6] Initializing /data/jay/recAmag6500dm.dm3: [testng] [2024-10-14 01:28:18,398] [pool-1-thread-11] Initializing /data/qa-21652/E coli phage H2O_100000.0V_67000X.dm4: [testng] [2024-10-14 01:28:18,844] [pool-1-thread-12] Initializing /data/jean-marc/5nm pixels 50nm cuts/5nm -- BSED - slice 0012.dm4: [testng] [2024-10-14 01:28:19,824] [pool-1-thread-8] Initializing /data/jay/graphitedm3.dm3: [testng] [2024-10-14 01:28:20,118] [pool-1-thread-11] Initializing /data/sindhu/JC76-G1-80000.0V-26000X-Sindhu-364.dm3: [testng] [2024-10-14 01:28:20,423] [pool-1-thread-1] Initializing /data/qa-7642/8.dm4: [testng] [2024-10-14 01:28:20,741] [pool-1-thread-10] Initializing /data/public/imagesc-36590/SmallMontage0008.dm4: [testng] [2024-10-14 01:28:21,443] [pool-1-thread-3] Initializing /data/jay/biosamplefullframetif.tif: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 5194, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 1 minute 34 seconds Finished: SUCCESS