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Started by upstream project "BIOFORMATS-test-repo" build number 27 originally caused by: Started by upstream project "Trigger" build number 30 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins369959216112370206.sh + '[' apng = slidebook ']' ++ date +%u + '[' 1 -le 1 ']' + DOCKER_ARGS='-Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR' + sudo docker run --rm --name BIOFORMATS-test-folder_3543_merge_ci -v /uod/idr/repos/curated/apng:/data -v /uod/idr-scratch/merge-ci/curated/apng:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 -Duser.language=fr -Duser.country=FR Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 02:27:44,422 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 02:27:44,424 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - No custom configurators were discovered as a service. [testng] 02:27:44,424 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:27:44,425 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 02:27:44,425 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 02:27:44,425 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 02:27:44,426 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 02:27:44,426 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:27:44,426 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 02:27:44,426 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 02:27:44,426 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 02:27:44,427 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 02:27:44,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 02:27:44,695 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 02:27:44,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 02:27:44,735 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 02:27:44,747 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 02:27:44,747 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 02:27:44,747 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 02:27:44,748 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 02:27:44,748 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@1ddf84b8 - End of configuration. [testng] 02:27:44,749 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@5e82df6a - Registering current configuration as safe fallback point [testng] 02:27:44,749 |-INFO in ch.qos.logback.classic.util.ContextInitializer@197d671 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 323 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-08 02:27:44,765] [main] java.version = 1.8.0_342 [testng] 02:27:44,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 02:27:44,770 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:44,838 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-08_02-27-44.log] [testng] 02:27:44,841 |-INFO in ch.qos.logback.core.sift.SiftProcessor@36fc695d - End of configuration. [testng] [2024-04-08 02:27:44,854] [main] testng.directory = /data [testng] [2024-04-08 02:27:44,855] [main] testng.configDirectory = /config [testng] [2024-04-08 02:27:44,918] [main] testng.multiplier = 1.0 [testng] [2024-04-08 02:27:44,919] [main] testng.in-memory = false [testng] [2024-04-08 02:27:44,920] [main] testng.allow-missing = false [testng] [2024-04-08 02:27:44,921] [main] user.language = fr [testng] [2024-04-08 02:27:44,922] [main] user.country = FR [testng] [2024-04-08 02:27:44,922] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-04-08 02:27:45,445] [main] ---------------------------------------- [testng] [2024-04-08 02:27:45,446] [main] Total files: 21 [testng] [2024-04-08 02:27:45,446] [main] Scan time: 0.522 s (24 ms/file) [testng] [2024-04-08 02:27:45,446] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 21 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-08 02:27:47,165] [pool-1-thread-1] Initializing /data/samples/Sun.png: [testng] 02:27:47,166 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:27:47,166 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,168 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-08_02-27-47.log] [testng] 02:27:47,169 |-INFO in ch.qos.logback.core.sift.SiftProcessor@70004006 - End of configuration. [testng] [2024-04-08 02:27:47,210] [pool-1-thread-12] Initializing /data/samples/atom.png: [testng] 02:27:47,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:27:47,211 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,212 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-08_02-27-47.log] [testng] 02:27:47,212 |-INFO in ch.qos.logback.core.sift.SiftProcessor@512195cb - End of configuration. [testng] [2024-04-08 02:27:47,216] [pool-1-thread-11] Initializing /data/samples/orbit.png: [testng] 02:27:47,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:27:47,216 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,217 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-08_02-27-47.log] [testng] 02:27:47,217 |-INFO in ch.qos.logback.core.sift.SiftProcessor@691e2ade - End of configuration. [testng] [2024-04-08 02:27:47,221] [pool-1-thread-10] Initializing /data/samples/monkey_apng.png: [testng] 02:27:47,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:27:47,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,221 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-08_02-27-47.log] [testng] 02:27:47,222 |-INFO in ch.qos.logback.core.sift.SiftProcessor@880d151 - End of configuration. [testng] [2024-04-08 02:27:47,227] [pool-1-thread-9] Initializing /data/qa-7473/x.png: [testng] 02:27:47,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:27:47,227 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,228 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-08_02-27-47.log] [testng] 02:27:47,228 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4e23d1d1 - End of configuration. [testng] [2024-04-08 02:27:47,233] [pool-1-thread-8] Initializing /data/samples/william_wong04.png: [testng] 02:27:47,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:27:47,233 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,234 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-08_02-27-47.log] [testng] 02:27:47,234 |-INFO in ch.qos.logback.core.sift.SiftProcessor@191d1319 - End of configuration. [testng] [2024-04-08 02:27:47,238] [pool-1-thread-7] Initializing /data/samples/daniel_coltri_two.png: [testng] 02:27:47,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:27:47,239 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,239 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-08_02-27-47.log] [testng] 02:27:47,240 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79cf8f32 - End of configuration. [testng] [2024-04-08 02:27:47,244] [pool-1-thread-6] Initializing /data/qa-7473/n.tif: [testng] 02:27:47,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:27:47,244 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,245 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-08_02-27-47.log] [testng] 02:27:47,246 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a1e136 - End of configuration. [testng] [2024-04-08 02:27:47,282] [pool-1-thread-5] Initializing /data/samples/MoonPhases.png: [testng] 02:27:47,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:27:47,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,283 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-08_02-27-47.log] [testng] 02:27:47,284 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3fcc724a - End of configuration. [testng] [2024-04-08 02:27:47,289] [pool-1-thread-4] Initializing /data/samples/joanna_viera01.png: [testng] 02:27:47,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:27:47,289 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,289 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-08_02-27-47.log] [testng] 02:27:47,290 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e866581 - End of configuration. [testng] [2024-04-08 02:27:47,293] [pool-1-thread-3] Initializing /data/samples/Matrix.png: [testng] 02:27:47,293 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:27:47,294 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,294 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-08_02-27-47.log] [testng] 02:27:47,295 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c43f26 - End of configuration. [testng] [2024-04-08 02:27:47,298] [pool-1-thread-2] Initializing /data/samples/phug_logo.png: [testng] 02:27:47,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:27:47,298 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:27:47,298 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-08_02-27-47.log] [testng] 02:27:47,299 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3d07845f - End of configuration. [testng] [2024-04-08 02:27:48,325] [pool-1-thread-7] Initializing /data/samples/william_wong02.png: [testng] [2024-04-08 02:27:48,333] [pool-1-thread-9] Initializing /data/samples/chompy2.png: [testng] [2024-04-08 02:27:48,337] [pool-1-thread-4] Initializing /data/samples/StarV838.png: [testng] [2024-04-08 02:27:48,689] [pool-1-thread-12] Initializing /data/samples/PhugAnimation3.png: [testng] [2024-04-08 02:27:48,693] [pool-1-thread-3] Initializing /data/samples/spinfox.png: [testng] [2024-04-08 02:27:48,697] [pool-1-thread-11] Initializing /data/samples/william_wong01.png: [testng] [2024-04-08 02:27:48,701] [pool-1-thread-5] Initializing /data/samples/william_wong05.png: [testng] [2024-04-08 02:27:48,706] [pool-1-thread-1] Initializing /data/colin/test.sfstdge.png: [testng] [2024-04-08 02:27:48,710] [pool-1-thread-10] Initializing /data/samples/daniel_coltri_one.png: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 1113, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 9 seconds Finished: SUCCESS