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Started by upstream project "BIOFORMATS-test-repo" build number 227 originally caused by: Started by upstream project "Trigger" build number 252 originally caused by: Started by user devspace Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@3 [BIOFORMATS-test-folder@3] $ /bin/bash -xe /tmp/jenkins1684785273668465160.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 5 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_35554_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test test-automated: [testng] File leak detector installed [testng] 07:38:59,707 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 07:38:59,709 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - No custom configurators were discovered as a service. [testng] 07:38:59,709 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 07:38:59,710 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 07:38:59,710 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 07:38:59,710 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 07:38:59,710 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 0 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 07:38:59,710 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 07:38:59,711 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 07:38:59,711 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 07:38:59,711 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 07:38:59,711 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 07:38:59,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 07:38:59,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 07:38:59,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 07:38:59,954 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 07:38:59,961 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 07:38:59,962 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 07:38:59,962 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 07:38:59,962 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 07:38:59,962 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@7a69b07 - End of configuration. [testng] 07:38:59,963 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@636be97c - Registering current configuration as safe fallback point [testng] 07:38:59,963 |-INFO in ch.qos.logback.classic.util.ContextInitializer@79ad8b2f - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 252 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-18 07:38:59,972] [main] java.version = 1.8.0_342 [testng] 07:38:59,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 07:38:59,976 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 07:39:00,019 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-18_07-38-59.log] [testng] 07:39:00,020 |-INFO in ch.qos.logback.core.sift.SiftProcessor@13c9d689 - End of configuration. [testng] [2024-10-18 07:39:00,022] [main] testng.directory = /data [testng] [2024-10-18 07:39:00,022] [main] testng.configDirectory = /config [testng] [2024-10-18 07:39:00,034] [main] testng.multiplier = 1.0 [testng] [2024-10-18 07:39:00,034] [main] testng.in-memory = false [testng] [2024-10-18 07:39:00,034] [main] testng.allow-missing = false [testng] [2024-10-18 07:39:00,034] [main] user.language = en [testng] [2024-10-18 07:39:00,034] [main] user.country = ${user.country} [testng] [2024-10-18 07:39:00,034] [main] Maximum heap size = 13653 MB [testng] Scanning for files... [testng] [2024-10-18 07:39:39,552] [main] ---------------------------------------- [testng] [2024-10-18 07:39:39,553] [main] Total files: 315 [testng] [2024-10-18 07:39:39,553] [main] Scan time: 39.518 s (125 ms/file) [testng] [2024-10-18 07:39:39,553] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 192 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-18 08:02:29,207] [pool-1-thread-1] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] 08:02:29,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 08:02:29,208 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:02:29,209 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-18_08-02-29.log] [testng] 08:02:29,209 |-INFO in ch.qos.logback.core.sift.SiftProcessor@66cf41cd - End of configuration. [testng] [2024-10-18 08:03:31,992] [pool-1-thread-12] Initializing /data/qa-17270/stack1.oir: [testng] 08:03:31,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 08:03:31,992 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:03:31,993 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-18_08-03-31.log] [testng] 08:03:31,993 |-INFO in ch.qos.logback.core.sift.SiftProcessor@607cde71 - End of configuration. [testng] [2024-10-18 08:03:35,933] [pool-1-thread-11] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] 08:03:35,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 08:03:35,933 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:03:35,934 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-18_08-03-35.log] [testng] 08:03:35,934 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58ae2748 - End of configuration. [testng] [2024-10-18 08:03:38,338] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 08:03:38,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 08:03:38,339 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:03:38,340 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-18_08-03-38.log] [testng] 08:03:38,340 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3da08571 - End of configuration. [testng] [2024-10-18 08:03:42,241] [pool-1-thread-9] Initializing /data/qa-17919/f10187.oir: [testng] 08:03:42,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 08:03:42,241 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:03:42,241 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-18_08-03-42.log] [testng] 08:03:42,242 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6fb085ec - End of configuration. [testng] [2024-10-18 08:04:03,742] [pool-1-thread-8] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] 08:04:03,742 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 08:04:03,743 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:04:03,743 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-18_08-04-03.log] [testng] 08:04:03,744 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2c1d43b0 - End of configuration. [testng] [2024-10-18 08:04:13,579] [pool-1-thread-7] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] 08:04:13,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 08:04:13,579 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:04:13,580 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-18_08-04-13.log] [testng] 08:04:13,580 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7d0c0f7 - End of configuration. [testng] [2024-10-18 08:04:17,427] [pool-1-thread-6] Initializing /data/qa-17270/image1.oir: [testng] 08:04:17,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 08:04:17,427 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:04:17,427 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-18_08-04-17.log] [testng] 08:04:17,428 |-INFO in ch.qos.logback.core.sift.SiftProcessor@38431e89 - End of configuration. [testng] [2024-10-18 08:04:20,373] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] 08:04:20,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 08:04:20,373 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:04:20,373 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-18_08-04-20.log] [testng] 08:04:20,374 |-INFO in ch.qos.logback.core.sift.SiftProcessor@cc608f8 - End of configuration. [testng] [2024-10-18 08:04:30,027] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] 08:04:30,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 08:04:30,028 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:04:30,028 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-18_08-04-30.log] [testng] 08:04:30,028 |-INFO in ch.qos.logback.core.sift.SiftProcessor@31ff3daa - End of configuration. [testng] [2024-10-18 08:04:37,967] [pool-1-thread-3] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] 08:04:37,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 08:04:37,967 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:04:37,968 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-18_08-04-37.log] [testng] 08:04:37,968 |-INFO in ch.qos.logback.core.sift.SiftProcessor@aa20f93 - End of configuration. [testng] [2024-10-18 08:04:44,446] [pool-1-thread-2] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] 08:04:44,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 08:04:44,446 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 08:04:44,446 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-18_08-04-44.log] [testng] 08:04:44,447 |-INFO in ch.qos.logback.core.sift.SiftProcessor@58188001 - End of configuration. [testng] [2024-10-18 08:05:12,243] [pool-1-thread-11] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-10-18 08:05:21,979] [pool-1-thread-10] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2024-10-18 08:05:27,218] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-10-18 08:05:35,216] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-10-18 08:05:47,405] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-10-18 08:05:51,908] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-10-18 08:05:55,831] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2024-10-18 08:06:06,210] [pool-1-thread-2] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-10-18 08:06:27,370] [pool-1-thread-10] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-10-18 08:06:36,943] [pool-1-thread-11] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-10-18 08:06:44,580] [pool-1-thread-8] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2024-10-18 08:06:48,511] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-10-18 08:06:56,377] [pool-1-thread-5] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-10-18 08:07:00,977] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-10-18 08:07:08,408] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-10-18 08:07:11,079] [pool-1-thread-12] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-10-18 08:07:21,454] [pool-1-thread-2] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-10-18 08:07:42,904] [pool-1-thread-10] Initializing /data/olympus/XYZt.oir: [testng] [2024-10-18 08:07:55,533] [pool-1-thread-5] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-10-18 08:08:07,712] [pool-1-thread-7] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-10-18 08:08:16,070] [pool-1-thread-4] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-10-18 08:08:19,381] [pool-1-thread-12] Initializing /data/qa-17922/example_multipart.oir: [testng] [2024-10-18 08:08:48,452] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-10-18 08:08:51,690] [pool-1-thread-3] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2024-10-18 08:08:56,211] [pool-1-thread-2] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-10-18 08:09:24,400] [pool-1-thread-9] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-10-18 08:09:28,036] [pool-1-thread-5] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir: [testng] [2024-10-18 08:09:32,103] [pool-1-thread-7] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-10-18 08:09:42,784] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-10-18 08:09:54,846] [pool-1-thread-10] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-10-18 08:09:59,405] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-10-18 08:10:07,430] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] [2024-10-18 08:10:15,106] [pool-1-thread-3] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-10-18 08:10:17,907] [pool-1-thread-11] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-10-18 08:10:45,079] [pool-1-thread-2] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-10-18 08:10:58,007] [pool-1-thread-7] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-10-18 08:11:13,031] [pool-1-thread-5] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-10-18 08:11:30,043] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2024-10-18 08:11:32,197] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-10-18 08:11:35,327] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-10-18 08:11:38,017] [pool-1-thread-3] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2024-10-18 08:11:54,992] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-10-18 08:11:59,269] [pool-1-thread-7] Initializing 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[pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-10-18 08:40:10,518] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-10-18 08:40:20,951] [pool-1-thread-3] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-10-18 08:40:44,962] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-10-18 08:40:51,088] [pool-1-thread-2] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-10-18 08:41:12,589] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-10-18 08:41:22,365] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-10-18 08:41:49,072] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-10-18 08:42:03,690] [pool-1-thread-7] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-10-18 08:42:34,475] [pool-1-thread-2] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-10-18 08:43:12,804] [pool-1-thread-4] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-10-18 08:43:28,980] [pool-1-thread-7] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2024-10-18 08:44:27,060] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-10-18 08:44:57,050] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-10-18 08:46:07,455] [pool-1-thread-9] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-10-18 08:46:19,680] [pool-1-thread-9] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-10-18 08:46:26,692] [pool-1-thread-2] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir: [testng] [2024-10-18 08:46:34,650] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-10-18 08:46:44,668] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-10-18 08:47:49,379] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2024-10-18 08:47:59,942] [pool-1-thread-7] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-10-18 08:48:16,465] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] 10:03:00,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 10:03:00,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 10:03:00,345 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-18_10-03-00.log] [testng] 10:03:00,345 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d61b259 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10176, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 144 minutes 5 seconds Finished: SUCCESS