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Started by upstream project "BIOFORMATS-test-repo" build number 228 originally caused by: Started by upstream project "Trigger" build number 253 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins16987407558621559324.sh + '[' zeiss-tiff = slidebook ']' ++ date +%u + '[' 6 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_35836_merge_ci -v /uod/idr/repos/curated/zeiss-tiff:/data -v /uod/idr-scratch/merge-ci/curated/zeiss-tiff:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 04:01:16,757 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 04:01:16,759 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 04:01:16,759 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:01:16,760 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 04:01:16,760 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 04:01:16,760 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 04:01:16,761 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 04:01:16,761 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:01:16,761 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 04:01:16,762 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 04:01:16,762 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 04:01:16,762 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 04:01:16,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 04:01:16,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 04:01:16,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 04:01:16,949 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 04:01:16,955 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 04:01:16,955 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 04:01:16,955 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 04:01:16,955 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 04:01:16,955 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 04:01:16,956 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 04:01:16,956 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 195 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-19 04:01:16,965] [main] java.version = 11.0.16 [testng] 04:01:16,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:01:16,968 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:01:17,009 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-19_04-01-16.log] [testng] 04:01:17,011 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-19 04:01:17,013] [main] testng.directory = /data [testng] [2024-10-19 04:01:17,013] [main] testng.configDirectory = /config [testng] [2024-10-19 04:01:17,023] [main] testng.multiplier = 1.0 [testng] [2024-10-19 04:01:17,024] [main] testng.in-memory = false [testng] [2024-10-19 04:01:17,024] [main] testng.allow-missing = false [testng] [2024-10-19 04:01:17,024] [main] user.language = en [testng] [2024-10-19 04:01:17,024] [main] user.country = ${user.country} [testng] [2024-10-19 04:01:17,024] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-19 04:02:11,086] [main] ---------------------------------------- [testng] [2024-10-19 04:02:11,086] [main] Total files: 15735 [testng] [2024-10-19 04:02:11,086] [main] Scan time: 54.061 s (3 ms/file) [testng] [2024-10-19 04:02:11,086] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 125 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-19 04:03:02,720] [pool-1-thread-1] Initializing /data/qa-21570/250618_J1_diff_D3-2-0002.tif: [testng] 04:03:02,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 04:03:02,721 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:02,722 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-19_04-03-02.log] [testng] 04:03:02,723 |-INFO in ch.qos.logback.core.sift.SiftProcessor@10ed83d5 - End of configuration. [testng] [2024-10-19 04:03:02,964] [pool-1-thread-12] Initializing /data/converted/jeffrey/750-30-03.tif: [testng] 04:03:02,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 04:03:02,965 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:02,966 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-19_04-03-02.log] [testng] 04:03:02,966 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1104e216 - End of configuration. [testng] [2024-10-19 04:03:03,173] [pool-1-thread-11] Initializing /data/converted/shalin/ibidiuslide1-timelapse3_mid2.tif: [testng] 04:03:03,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 04:03:03,174 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:03,174 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-19_04-03-03.log] [testng] 04:03:03,175 |-INFO in ch.qos.logback.core.sift.SiftProcessor@77950eb - End of configuration. [testng] [2024-10-19 04:03:03,497] [pool-1-thread-10] Initializing /data/converted/susan/BY4741NQ2.tif: [testng] 04:03:03,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 04:03:03,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:03,499 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-19_04-03-03.log] [testng] 04:03:03,499 |-INFO in ch.qos.logback.core.sift.SiftProcessor@557ca3bb - End of configuration. [testng] [2024-10-19 04:03:03,785] [pool-1-thread-9] Initializing /data/converted/rolf/example_1-2010_11_25.tif: [testng] 04:03:03,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 04:03:03,785 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:03,785 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-19_04-03-03.log] [testng] 04:03:03,786 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2f76d63d - End of configuration. [testng] [2024-10-19 04:03:04,055] [pool-1-thread-8] Initializing /data/converted/dietmar/137.tif: [testng] 04:03:04,055 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 04:03:04,056 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:04,056 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-19_04-03-04.log] [testng] 04:03:04,056 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1f2dafcd - End of configuration. [testng] [2024-10-19 04:03:04,439] [pool-1-thread-7] Initializing /data/converted/markus/Branchiostoma_6x12_MosaiX_Tiles_color.tif: [testng] 04:03:04,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 04:03:04,439 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:04,439 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-19_04-03-04.log] [testng] 04:03:04,440 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5cb27aec - End of configuration. [testng] [2024-10-19 04:03:04,803] [pool-1-thread-6] Initializing /data/converted/thomas/test_axiocam_3_1.tif: [testng] 04:03:04,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 04:03:04,803 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:04,803 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-19_04-03-04.log] [testng] 04:03:04,804 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2df20b7a - End of configuration. [testng] [2024-10-19 04:03:05,053] [pool-1-thread-5] Initializing /data/converted/markus/PC12_neuroblastoma_Fura2_exp#9.tif: [testng] 04:03:05,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 04:03:05,053 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:05,054 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-19_04-03-05.log] [testng] 04:03:05,055 |-INFO in ch.qos.logback.core.sift.SiftProcessor@486e00c2 - End of configuration. [testng] [2024-10-19 04:03:05,932] [pool-1-thread-4] Initializing /data/converted/joseph/E-2009-0001a.tif: [testng] 04:03:05,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 04:03:05,932 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:05,933 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-19_04-03-05.log] [testng] 04:03:05,933 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d6f31f6 - End of configuration. [testng] [2024-10-19 04:03:06,381] [pool-1-thread-3] Initializing /data/converted/darren/section0002_w1.tif: [testng] 04:03:06,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 04:03:06,381 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:06,382 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-19_04-03-06.log] [testng] 04:03:06,382 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3e203ee - End of configuration. [testng] [2024-10-19 04:03:06,678] [pool-1-thread-2] Initializing /data/converted/markus/MosaiX_irregular_Z-stack_with_autofocus.tif: [testng] 04:03:06,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 04:03:06,678 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:03:06,679 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-19_04-03-06.log] [testng] 04:03:06,679 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2a563f64 - End of configuration. [testng] [2024-10-19 04:03:16,760] [pool-1-thread-1] Initializing /data/converted/eirinn/pharm3-saline2-0147_11.tif: [testng] [2024-10-19 04:03:18,944] [pool-1-thread-10] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-0016.tif: [testng] [2024-10-19 04:03:19,561] [pool-1-thread-9] Initializing /data/converted/strand/2Colors1Plane.tif: [testng] [2024-10-19 04:03:20,207] [pool-1-thread-6] Initializing /data/converted/michel/d.tif: [testng] [2024-10-19 04:03:20,901] [pool-1-thread-12] Initializing /data/scott/Slide133-08.tif: [testng] [2024-10-19 04:03:21,486] [pool-1-thread-3] Initializing /data/converted/nicolas/image.tif: [testng] [2024-10-19 04:03:32,464] [pool-1-thread-3] Initializing /data/converted/markus/Confidence_ratio_image_PC12_neuroblastoma_Fura2_exp#9-2.tif: [testng] [2024-10-19 04:03:36,581] [pool-1-thread-12] Initializing /data/converted/markus/Material_color_image_HRc_microscanned_4x3K.tif: [testng] [2024-10-19 04:03:37,383] [pool-1-thread-6] Initializing /data/converted/converted/damian-compressed.tif: [testng] [2024-10-19 04:03:50,000] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_9.tif: [testng] [2024-10-19 04:03:50,933] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_1.tif: [testng] [2024-10-19 04:03:54,872] [pool-1-thread-12] Initializing /data/converted/sebastien/test.tif: [testng] [2024-10-19 04:04:39,350] [pool-1-thread-10] Initializing /data/scott/Slide133-04.tif: [testng] [2024-10-19 04:04:42,682] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_12.tif: [testng] [2024-10-19 04:04:55,239] [pool-1-thread-10] Initializing /data/qa-21570/20150421_HepG2_yH2AX_DAPI_0.5h_5GyDOWN_1512_cell04_SIR_ALX.dv_comp.tif: [testng] [2024-10-19 04:05:00,453] [pool-1-thread-10] Initializing /data/converted/karsten/247096n3s3s9.tif: [testng] [2024-10-19 04:05:56,547] [pool-1-thread-10] Initializing /data/converted/joseph/BEST_EXAMPLE_LONGER_EXPOSURE.tif: [testng] [2024-10-19 04:06:18,772] [pool-1-thread-1] Initializing /data/converted/ville/MultiCh-RGB/pollen_rgb.tif: [testng] [2024-10-19 04:06:33,266] [pool-1-thread-8] Initializing /data/qa-21570/250618_J1_diff_D3-2-0004.tif: [testng] [2024-10-19 04:06:35,570] [pool-1-thread-10] Initializing /data/converted/rolf/example_2-2010_11_25.tif: [testng] [2024-10-19 04:06:37,108] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_13.tif: [testng] [2024-10-19 04:06:45,205] [pool-1-thread-8] Initializing /data/converted/lior/live+cf5b.tif: [testng] [2024-10-19 04:06:50,009] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_24.tif: [testng] [2024-10-19 04:06:51,757] [pool-1-thread-7] Initializing /data/converted/othmar/mozaic.tif: [testng] [2024-10-19 04:07:07,653] [pool-1-thread-6] Initializing /data/converted/kelsey/432x342BW.tif: [testng] [2024-10-19 04:07:10,276] [pool-1-thread-8] Initializing /data/converted/lior/live+cf2b.tif: [testng] [2024-10-19 04:07:21,678] [pool-1-thread-6] Initializing /data/converted/markus/HeLa-Reggie-GFP_ZT_fast-DCV-CI-measured-PSF.tif: [testng] [2024-10-19 04:07:29,975] [pool-1-thread-9] Initializing /data/converted/converted/wtzer_series76_z003_ch00.tif: [testng] [2024-10-19 04:07:38,128] [pool-1-thread-8] Initializing /data/converted/dan/zstack_convalaria.tif: [testng] [2024-10-19 04:07:40,064] [pool-1-thread-4] Initializing /data/othmar/mozaic.tif: [testng] [2024-10-19 04:07:43,805] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_23.tif: [testng] [2024-10-19 04:07:46,317] [pool-1-thread-2] Initializing /data/converted/kelsey/650x514BW.tif: [testng] [2024-10-19 04:07:56,449] [pool-1-thread-8] Initializing /data/converted/monica/Monica_elegans_movie.tif: [testng] [2024-10-19 04:08:00,814] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_JPEG_5percent_compressed.tif: [testng] [2024-10-19 04:08:01,630] [pool-1-thread-12] Initializing /data/converted/cecilia/day 1 naked nb positive 1-2007-0055.tif: [testng] [2024-10-19 04:08:20,023] [pool-1-thread-12] Initializing /data/converted/markus/Mouse-newborn-panorama.tif: [testng] [2024-10-19 04:08:29,396] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_14.tif: [testng] [2024-10-19 04:08:31,341] [pool-1-thread-11] Initializing /data/converted/stephan/notok1.tif: [testng] [2024-10-19 04:08:55,119] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_21.tif: [testng] [2024-10-19 04:09:13,609] [pool-1-thread-7] Initializing /data/converted/converted/mri-stack.tif: [testng] [2024-10-19 04:09:40,441] [pool-1-thread-7] Initializing /data/converted/sebastien/F1.tif: [testng] [2024-10-19 04:10:23,788] [pool-1-thread-11] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_2.tif: [testng] [2024-10-19 04:10:36,707] [pool-1-thread-4] Initializing /data/converted/markus/HighSpeedParas.tif: [testng] [2024-10-19 04:12:26,144] [pool-1-thread-1] Initializing /data/converted/michel/e.tif: [testng] [2024-10-19 04:13:23,675] [pool-1-thread-7] Initializing /data/converted/vladan/vladan.tif: [testng] [2024-10-19 04:13:25,252] [pool-1-thread-10] Initializing /data/converted/michel/b.tif: [testng] [2024-10-19 04:13:26,863] [pool-1-thread-1] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-ten.tif: [testng] [2024-10-19 04:14:02,485] [pool-1-thread-10] Initializing /data/converted/eirinn/demo-tile.tif: [testng] [2024-10-19 04:14:38,425] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_3.tif: [testng] [2024-10-19 04:15:03,418] [pool-1-thread-9] Initializing /data/converted/karsten/Bild1.tif: [testng] [2024-10-19 04:15:35,675] [pool-1-thread-9] Initializing /data/converted/converted/deconvolve6_pseudo_tl000_zs000.tif: [testng] [2024-10-19 04:15:58,339] [pool-1-thread-9] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_22.tif: [testng] [2024-10-19 04:16:13,867] [pool-1-thread-2] Initializing /data/converted/jan/SampleStack_Mosaic4x5_comb.tif: [testng] [2024-10-19 04:16:44,201] [pool-1-thread-12] Initializing /data/converted/eirinn/11_10_2009-01-lcstim-15-10-09_position(1).tif: [testng] [2024-10-19 04:17:10,971] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_18.tif: [testng] [2024-10-19 04:17:26,037] [pool-1-thread-1] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_25.tif: [testng] [2024-10-19 04:17:36,725] [pool-1-thread-11] Initializing /data/converted/dietmar/138.tif: [testng] [2024-10-19 04:18:59,032] [pool-1-thread-7] Initializing /data/converted/rachel/40K 30s A1.tif: [testng] [2024-10-19 04:19:25,427] [pool-1-thread-7] Initializing /data/scott/Slide133-11.tif: [testng] [2024-10-19 04:19:47,583] [pool-1-thread-7] Initializing /data/converted/darren/section0001_w1.tif: [testng] [2024-10-19 04:20:03,455] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_08.tif: [testng] [2024-10-19 04:20:10,072] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-widefield.tif: [testng] [2024-10-19 04:21:00,401] [pool-1-thread-10] Initializing /data/converted/markus/Brain_high_dynamic_range_imaging_Z-stack.tif: [testng] [2024-10-19 04:22:32,547] [pool-1-thread-9] Initializing /data/converted/michel/a.tif: [testng] [2024-10-19 04:22:52,154] [pool-1-thread-9] Initializing /data/converted/othmar/z-stack.tif: [testng] [2024-10-19 04:23:39,298] [pool-1-thread-11] Initializing /data/converted/dietmar/dapi-texasred-0015.tif: [testng] [2024-10-19 04:23:57,170] [pool-1-thread-3] Initializing /data/samples/mri-stack/mri-stack.tif: [testng] [2024-10-19 04:24:12,855] [pool-1-thread-10] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_11.tif: [testng] [2024-10-19 04:24:17,884] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_5.tif: [testng] [2024-10-19 04:24:19,556] [pool-1-thread-1] Initializing /data/converted/eirinn/12_2_2009-16-hes5-brdu-proper_position(52).tif: [testng] [2024-10-19 04:27:46,116] [pool-1-thread-1] Initializing /data/converted/converted/damian.tif: [testng] [2024-10-19 04:28:06,314] [pool-1-thread-1] Initializing /data/converted/joseph/E-2009-0004.tif: [testng] [2024-10-19 04:28:50,063] [pool-1-thread-11] Initializing /data/converted/markus/Hypocampus_Tiles_with_stiching.tif: [testng] [2024-10-19 04:29:23,906] [pool-1-thread-7] Initializing /data/converted/converted/2chz.tif: [testng] [2024-10-19 04:30:00,037] [pool-1-thread-5] Initializing /data/converted/converted/wtzer_series76_z003_ch00-with-rois.tif: [testng] [2024-10-19 04:30:30,608] [pool-1-thread-5] Initializing /data/converted/eirinn/12_16_2009-01-tara-hd-triple-5to15_position(1)5.tif: [testng] [2024-10-19 04:30:37,164] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_4.tif: [testng] [2024-10-19 04:31:14,562] [pool-1-thread-3] Initializing /data/converted/miso/Aufnahme-184058-0002.tif: [testng] [2024-10-19 04:31:26,183] [pool-1-thread-10] Initializing /data/qa-21570/250618_J1_diff_D3-2-0003.tif: [testng] [2024-10-19 04:31:40,660] [pool-1-thread-3] Initializing /data/converted/ville/MultiCh-RGB/pollen_bw.tif: [testng] [2024-10-19 04:31:42,525] [pool-1-thread-11] Initializing /data/converted/eirinn/5_6_2009-dj9-03_a01_01.tif: [testng] [2024-10-19 04:31:52,933] [pool-1-thread-10] Initializing /data/converted/dan/adultnr1.tif: [testng] [2024-10-19 04:32:17,187] [pool-1-thread-3] Initializing /data/converted/james/Sylvain_run3_1Gy_Live7-2008-0019.tif: [testng] [2024-10-19 04:32:30,706] [pool-1-thread-11] Initializing /data/converted/dietmar/hmads-24h-bac1-7-af647-af488-rho-1day-hyb-csk-2007-06-29-0008_position(113).tif: [testng] [2024-10-19 04:32:43,479] [pool-1-thread-7] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_8.tif: [testng] [2024-10-19 04:32:59,582] [pool-1-thread-10] Initializing /data/converted/converted/2chzt.tif: [testng] [2024-10-19 04:34:14,274] [pool-1-thread-3] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_10.tif: [testng] [2024-10-19 04:35:42,693] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_15.tif: [testng] [2024-10-19 04:36:13,098] [pool-1-thread-5] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_19.tif: [testng] [2024-10-19 04:37:19,768] [pool-1-thread-1] Initializing /data/converted/markus/Long_TL_CElegans.tif: [testng] [2024-10-19 04:37:31,845] [pool-1-thread-9] Initializing /data/converted/dietmar/hmads-bac1-bac7-af488-rho-af647_pre-2006-03-30-six.tif: [testng] [2024-10-19 04:37:43,470] [pool-1-thread-6] Initializing /data/converted/michel/c.tif: [testng] [2024-10-19 04:38:17,290] [pool-1-thread-6] Initializing /data/converted/rachel/40K 30s A2.tif: [testng] [2024-10-19 04:38:48,597] [pool-1-thread-6] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_6.tif: [testng] [2024-10-19 04:39:19,731] [pool-1-thread-2] Initializing /data/converted/joseph/Alike_best_example_but_WORKS_FINE_maybe_cause_shorter_expose.tif: [testng] [2024-10-19 04:39:37,568] [pool-1-thread-11] Initializing /data/converted/markus/Smart_Experiment_4ch-T-time-stitched.tif: [testng] [2024-10-19 04:39:58,087] [pool-1-thread-7] Initializing /data/converted/karsten/Bild2.tif: [testng] [2024-10-19 04:40:31,360] [pool-1-thread-7] Initializing /data/scott/Slide133-01.tif: [testng] [2024-10-19 04:40:53,796] [pool-1-thread-3] Initializing /data/converted/joseph/E-2009_0022.tif: [testng] [2024-10-19 04:40:58,800] [pool-1-thread-7] Initializing /data/dorai/F_ZImage10_(X10)_C.tif: [testng] [2024-10-19 04:41:04,987] [pool-1-thread-2] Initializing /data/converted/markus/30channels_exposure-series.tif: [testng] [2024-10-19 04:41:24,583] [pool-1-thread-9] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sectioned.tif: [testng] [2024-10-19 04:41:28,273] [pool-1-thread-7] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast.tif: [testng] [2024-10-19 04:42:50,240] [pool-1-thread-12] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_16.tif: [testng] [2024-10-19 04:43:07,099] [pool-1-thread-2] Initializing /data/converted/markus/Mouse-newborn-panorama_lossless_compressed.tif: [testng] [2024-10-19 04:43:47,461] [pool-1-thread-2] Initializing /data/converted/gaetan/gml16_cenp-fitc_dapi_17.tif: [testng] [2024-10-19 04:43:51,104] [pool-1-thread-5] Initializing /data/converted/markus/VivaTome_sample/cell 40 w raw fast-sidebyside.tif: [testng] [2024-10-19 04:45:14,272] [pool-1-thread-6] Initializing /data/converted/markus/6ch-Z-stack_deconvolved.tif: [testng] [2024-10-19 04:49:34,530] [pool-1-thread-3] Initializing /data/converted/david/snap-181518-0001.tif: [testng] [2024-10-19 04:49:40,199] [pool-1-thread-12] Initializing /data/converted/kelsey/1300x1030BW.tif: [testng] [2024-10-19 04:49:56,340] [pool-1-thread-3] Initializing /data/converted/markus/PhaseGFP-MosaiX-Timelapse_Tiles.tif: [testng] [2024-10-19 04:49:59,149] [pool-1-thread-12] Initializing /data/converted/jonas/10_0907_multidrug-0001_AB01_03.tif: [testng] [2024-10-19 04:50:11,665] [pool-1-thread-7] Initializing /data/converted/stephan/notok2.tif: [testng] 05:22:46,441 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 05:22:46,442 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 05:22:46,443 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-19_05-22-46.log] [testng] 05:22:46,443 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d0ea3a9 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 6625, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 81 minutes 33 seconds Finished: SUCCESS