![[Jenkins]](/jenkins/static/03a0bb70/images/svgs/logo.svg){kind=logo}
Started by upstream project "BIOFORMATS-test-repo" build number 229 originally caused by: Started by upstream project "Trigger" build number 254 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@4 [BIOFORMATS-test-folder@4] $ /bin/bash -xe /tmp/jenkins8619596052337906765.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 7 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_35882_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] Could not load field socket from SocketImpl: java.lang.NoSuchFieldException: socket [testng] Could not load field serverSocket from SocketImpl: java.lang.NoSuchFieldException: serverSocket [testng] File leak detector installed [testng] 01:21:12,895 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:21:12,896 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - No custom configurators were discovered as a service. [testng] 01:21:12,896 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:12,897 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:21:12,898 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:21:12,898 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:21:12,898 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 1 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:21:12,898 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:12,899 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:21:12,900 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:21:12,900 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:21:12,901 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:21:13,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:21:13,085 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:21:13,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:21:13,110 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:21:13,116 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:21:13,117 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:21:13,117 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:21:13,117 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:21:13,117 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2e3967ea - End of configuration. [testng] 01:21:13,118 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@2e6a8155 - Registering current configuration as safe fallback point [testng] 01:21:13,118 |-INFO in ch.qos.logback.classic.util.ContextInitializer@55b53d44 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 219 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-20 01:21:13,128] [main] java.version = 17.0.2 [testng] 01:21:13,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:21:13,133 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:21:13,177 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-20_01-21-13.log] [testng] 01:21:13,178 |-INFO in ch.qos.logback.core.sift.SiftProcessor@798162bc - End of configuration. [testng] [2024-10-20 01:21:13,180] [main] testng.directory = /data [testng] [2024-10-20 01:21:13,181] [main] testng.configDirectory = /config [testng] [2024-10-20 01:21:13,190] [main] testng.multiplier = 1.0 [testng] [2024-10-20 01:21:13,190] [main] testng.in-memory = false [testng] [2024-10-20 01:21:13,191] [main] testng.allow-missing = false [testng] [2024-10-20 01:21:13,191] [main] user.language = en [testng] [2024-10-20 01:21:13,191] [main] user.country = ${user.country} [testng] [2024-10-20 01:21:13,191] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-20 01:21:35,222] [main] ---------------------------------------- [testng] [2024-10-20 01:21:35,222] [main] Total files: 315 [testng] [2024-10-20 01:21:35,222] [main] Scan time: 22.031 s (69 ms/file) [testng] [2024-10-20 01:21:35,222] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 192 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-20 01:31:27,220] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] 01:31:27,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:31:27,221 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,222 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-20_01-31-27.log] [testng] 01:31:27,223 |-INFO in ch.qos.logback.core.sift.SiftProcessor@71c17af5 - End of configuration. [testng] [2024-10-20 01:31:27,426] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] 01:31:27,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:31:27,426 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,427 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-20_01-31-27.log] [testng] 01:31:27,427 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5f471b71 - End of configuration. [testng] [2024-10-20 01:31:27,667] [pool-1-thread-11] Initializing /data/public/etienne/venus stack.oir: [testng] 01:31:27,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:31:27,667 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:27,668 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-20_01-31-27.log] [testng] 01:31:27,668 |-INFO in ch.qos.logback.core.sift.SiftProcessor@52b618aa - End of configuration. [testng] [2024-10-20 01:31:28,149] [pool-1-thread-10] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] 01:31:28,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:31:28,149 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:28,150 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-20_01-31-28.log] [testng] 01:31:28,150 |-INFO in ch.qos.logback.core.sift.SiftProcessor@94ff780 - End of configuration. [testng] [2024-10-20 01:31:28,372] [pool-1-thread-9] Initializing /data/qa-17335/Clipboard-stimulation_0001_LSM.tif: [testng] 01:31:28,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:31:28,372 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:28,373 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-20_01-31-28.log] [testng] 01:31:28,373 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7bff5460 - End of configuration. [testng] [2024-10-20 01:31:28,737] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-PA-GFPv-2.tif: [testng] 01:31:28,737 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:31:28,737 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:28,738 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-20_01-31-28.log] [testng] 01:31:28,738 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a0b39a3 - End of configuration. [testng] [2024-10-20 01:31:29,092] [pool-1-thread-7] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] 01:31:29,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:31:29,092 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:29,093 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-20_01-31-29.log] [testng] 01:31:29,093 |-INFO in ch.qos.logback.core.sift.SiftProcessor@24a41b33 - End of configuration. [testng] [2024-10-20 01:31:29,345] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] 01:31:29,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:31:29,345 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:29,346 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-20_01-31-29.log] [testng] 01:31:29,346 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3765c896 - End of configuration. [testng] [2024-10-20 01:31:29,592] [pool-1-thread-5] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] 01:31:29,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:31:29,593 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:29,593 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-20_01-31-29.log] [testng] 01:31:29,594 |-INFO in ch.qos.logback.core.sift.SiftProcessor@529ce49d - End of configuration. [testng] [2024-10-20 01:31:29,832] [pool-1-thread-4] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] 01:31:29,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:31:29,832 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:29,833 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-20_01-31-29.log] [testng] 01:31:29,833 |-INFO in ch.qos.logback.core.sift.SiftProcessor@79c13ed6 - End of configuration. [testng] [2024-10-20 01:31:30,043] [pool-1-thread-3] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4T_5Lambda-420-630-w10nm-s50nm.oir: [testng] 01:31:30,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:31:30,043 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:30,044 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-20_01-31-30.log] [testng] 01:31:30,044 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7df83905 - End of configuration. [testng] [2024-10-20 01:31:30,311] [pool-1-thread-2] Initializing /data/qa-17922/example_multipart.oir: [testng] 01:31:30,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:31:30,312 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:31:30,312 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-20_01-31-30.log] [testng] 01:31:30,313 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2e045746 - End of configuration. [testng] [2024-10-20 01:31:56,754] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-10-20 01:31:56,931] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-10-20 01:31:57,214] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-10-20 01:31:57,405] [pool-1-thread-12] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] [2024-10-20 01:31:58,014] [pool-1-thread-7] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-10-20 01:31:58,236] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-10-20 01:31:58,383] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-10-20 01:31:58,556] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-10-20 01:31:58,722] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-10-20 01:32:01,170] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-10-20 01:32:01,890] [pool-1-thread-8] Initializing /data/olympus/calcium sparks_XYt.oir: [testng] [2024-10-20 01:32:02,497] [pool-1-thread-7] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-10-20 01:32:02,777] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-10-20 01:32:03,246] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-10-20 01:32:03,688] [pool-1-thread-5] Initializing /data/olympus/40X_4CH_XY.oir: [testng] [2024-10-20 01:32:04,621] [pool-1-thread-4] Initializing /data/qa-16881/P10-50 D2_0006.ome.tif: [testng] [2024-10-20 01:32:05,187] [pool-1-thread-6] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] [2024-10-20 01:32:05,515] [pool-1-thread-11] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.oir: [testng] [2024-10-20 01:32:05,960] [pool-1-thread-10] Initializing /data/qa-17335/stimulation_0001_LSM.oir: [testng] [2024-10-20 01:32:06,433] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] [2024-10-20 01:32:09,545] [pool-1-thread-1] Initializing /data/olympus/Clipboard-stitched 4x4 zstack 10X_XYZ.tif: [testng] [2024-10-20 01:32:10,558] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-10-20 01:32:10,884] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.oir: [testng] [2024-10-20 01:32:11,601] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Image_0058_0001.ome.tif: [testng] [2024-10-20 01:32:11,954] [pool-1-thread-6] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-10-20 01:32:12,364] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-10-20 01:32:12,856] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-10-20 01:32:13,500] [pool-1-thread-8] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-10-20 01:32:15,090] [pool-1-thread-3] Initializing /data/qa-16881/P10D1 20150729_0019.ome.tif: [testng] [2024-10-20 01:32:15,381] [pool-1-thread-1] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-10-20 01:32:15,699] [pool-1-thread-4] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-10-20 01:32:15,968] [pool-1-thread-9] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-10-20 01:32:16,606] [pool-1-thread-4] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-10-20 01:32:17,615] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-10-20 01:32:18,837] [pool-1-thread-10] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-10-20 01:32:20,147] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-10-20 01:32:21,232] [pool-1-thread-8] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-10-20 01:32:21,830] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-10-20 01:32:22,561] [pool-1-thread-3] Initializing /data/qa-17270/image1.ome.tif: [testng] [2024-10-20 01:32:24,510] [pool-1-thread-9] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-10-20 01:32:25,490] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-10-20 01:32:26,055] [pool-1-thread-4] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-10-20 01:32:26,804] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-10-20 01:32:27,279] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-10-20 01:32:28,864] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-10-20 01:32:30,108] [pool-1-thread-7] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-10-20 01:32:30,950] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x-1.oir.vsi: [testng] [2024-10-20 01:32:31,876] [pool-1-thread-6] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-10-20 01:32:32,983] [pool-1-thread-9] Initializing /data/olympus/_calcium sparks_XYt_/stack1/frame_t_0.ets: [testng] [2024-10-20 01:32:34,538] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-10-20 01:32:35,260] [pool-1-thread-10] Initializing /data/olympus/Stitched_XYZ.ome.tif: [testng] [2024-10-20 01:32:36,197] [pool-1-thread-1] Initializing /data/qa-17335/1.ome.tif: [testng] [2024-10-20 01:32:36,641] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-10-20 01:32:38,651] [pool-1-thread-3] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-10-20 01:32:39,641] [pool-1-thread-7] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-10-20 01:32:40,074] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-P10-50 D2_0019.tif: [testng] [2024-10-20 01:32:40,693] [pool-1-thread-4] Initializing /data/qa-16871/XY_0003.oir: [testng] [2024-10-20 01:32:42,368] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-10-20 01:32:42,663] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Clipboard-Image_0050_0001.tif: [testng] [2024-10-20 01:32:43,754] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0019.tif: [testng] [2024-10-20 01:32:45,207] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-10-20 01:32:45,849] [pool-1-thread-8] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-10-20 01:32:48,448] [pool-1-thread-12] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-10-20 01:32:49,426] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-venus stack.tif: [testng] [2024-10-20 01:32:50,586] [pool-1-thread-7] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-10-20 01:32:51,314] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.oir: [testng] [2024-10-20 01:32:54,139] [pool-1-thread-4] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-10-20 01:32:56,349] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-10-20 01:32:56,829] [pool-1-thread-8] Initializing /data/qa-17270/alexa488.oir: [testng] [2024-10-20 01:32:57,487] [pool-1-thread-6] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-10-20 01:32:58,229] [pool-1-thread-1] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-10-20 01:32:58,825] [pool-1-thread-7] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-10-20 01:33:00,108] [pool-1-thread-10] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_22Lambda-420-630-w10nm-s10nm.oir: [testng] [2024-10-20 01:33:00,550] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-10-20 01:33:01,192] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-10-20 01:33:02,285] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-10-20 01:33:06,530] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.ome.tif: [testng] [2024-10-20 01:33:07,605] [pool-1-thread-4] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-10-20 01:33:09,175] [pool-1-thread-7] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-10-20 01:33:10,040] [pool-1-thread-11] Initializing /data/olympus/XYZt.vsi: [testng] [2024-10-20 01:33:10,460] [pool-1-thread-6] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-10-20 01:33:11,933] [pool-1-thread-3] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] [2024-10-20 01:33:15,542] [pool-1-thread-5] Initializing /data/qa-16881/P10-50 D2_0019.ome.tif: [testng] [2024-10-20 01:33:18,357] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-10-20 01:33:19,277] [pool-1-thread-9] Initializing /data/public/gh-4205/zenodo-13680725/Stitch_A01_G001.oir: [testng] [2024-10-20 01:33:20,755] [pool-1-thread-12] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-10-20 01:33:22,276] [pool-1-thread-4] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-10-20 01:33:23,348] [pool-1-thread-6] Initializing /data/qa-17270/image1.oir: [testng] [2024-10-20 01:33:24,010] [pool-1-thread-5] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-10-20 01:33:26,939] [pool-1-thread-11] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-10-20 01:33:28,179] [pool-1-thread-12] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/matl.omp2info: [testng] [2024-10-20 01:33:34,598] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] [2024-10-20 01:33:36,282] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Clipboard-Image_0099_0001.tif: [testng] [2024-10-20 01:33:37,777] [pool-1-thread-9] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-10-20 01:33:40,765] [pool-1-thread-11] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-10-20 01:33:42,477] [pool-1-thread-10] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-10-20 01:33:44,074] [pool-1-thread-7] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-10-20 01:33:47,259] [pool-1-thread-9] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] [2024-10-20 01:33:48,652] [pool-1-thread-4] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-10-20 01:33:49,515] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W1-135 D6 New 20150818_0010.tif: [testng] [2024-10-20 01:33:51,917] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] [2024-10-20 01:33:54,083] [pool-1-thread-1] Initializing /data/qa-16881/W1-75 D11 New 20150825_0004.ome.tif: [testng] [2024-10-20 01:33:56,235] [pool-1-thread-4] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-10-20 01:33:57,015] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2024-10-20 01:33:58,032] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.ome.tif: [testng] [2024-10-20 01:33:59,010] [pool-1-thread-7] Initializing /data/martin/20170824_JupGFP_HisRFP_wL3_30xSI_4xzoom_0p5z_A01_G001_0001.oir: [testng] [2024-10-20 01:34:53,990] [pool-1-thread-5] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-10-20 01:34:56,436] [pool-1-thread-11] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] [2024-10-20 01:34:56,898] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-10-20 01:34:57,707] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0024.tif: [testng] [2024-10-20 01:34:58,621] [pool-1-thread-9] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-10-20 01:35:01,128] [pool-1-thread-8] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] [2024-10-20 01:35:01,811] [pool-1-thread-5] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-10-20 01:35:04,874] [pool-1-thread-10] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-10-20 01:35:05,680] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-10-20 01:35:06,467] [pool-1-thread-1] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-10-20 01:35:07,018] [pool-1-thread-8] Initializing /data/qa-17919/f10187.oir: [testng] [2024-10-20 01:35:27,744] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-10-20 01:35:30,126] [pool-1-thread-1] Initializing /data/public/gh-4205/zenodo-12773657/DAPI_mCherry_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2024-10-20 01:35:30,685] [pool-1-thread-10] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-10-20 01:35:31,685] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-10-20 01:35:33,638] [pool-1-thread-5] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-10-20 01:35:35,938] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.ome.tif: [testng] [2024-10-20 01:35:37,175] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-10-20 01:35:40,990] [pool-1-thread-5] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.ome.tif: [testng] [2024-10-20 01:35:41,958] [pool-1-thread-4] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-10-20 01:35:43,417] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-10-20 01:35:45,430] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.oir: [testng] [2024-10-20 01:35:46,044] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.ome.tif: [testng] [2024-10-20 01:35:46,453] [pool-1-thread-5] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-10-20 01:35:49,118] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-10-20 01:35:50,117] [pool-1-thread-1] Initializing /data/public/gh-4205/zenodo-12773657/DAPI-mCherry_3T_4Z_5Lambda-420-630-w10nm-s50nm.oir: [testng] [2024-10-20 01:35:51,199] [pool-1-thread-4] Initializing /data/qa-17335/Clipboard-1.tif: [testng] [2024-10-20 01:35:51,988] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Clipboard-Image_0079_0001.tif: [testng] [2024-10-20 01:35:53,572] [pool-1-thread-5] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-10-20 01:35:56,242] [pool-1-thread-11] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-10-20 01:35:57,049] [pool-1-thread-4] Initializing /data/qa-17270/stack1.oir: [testng] [2024-10-20 01:35:58,892] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-10-20 01:36:00,862] [pool-1-thread-5] Initializing /data/qa-17270/alexa488.ome.tif: [testng] [2024-10-20 01:36:02,580] [pool-1-thread-11] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-10-20 01:36:05,522] [pool-1-thread-6] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-10-20 01:36:05,902] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-10-20 01:36:06,629] [pool-1-thread-5] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-10-20 01:36:08,817] [pool-1-thread-11] Initializing /data/olympus/Stitched_XYZ.vsi: [testng] [2024-10-20 01:36:10,505] [pool-1-thread-6] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-10-20 01:36:11,583] [pool-1-thread-1] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-10-20 01:36:13,747] [pool-1-thread-5] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-10-20 01:36:19,057] [pool-1-thread-4] Initializing /data/olympus/40X_4CH_XY.ome.tif: [testng] [2024-10-20 01:36:19,662] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-LILY POLLEN.tif: [testng] [2024-10-20 01:36:22,263] [pool-1-thread-6] Initializing /data/olympus/XYZt.oir: [testng] [2024-10-20 01:36:24,609] [pool-1-thread-1] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.oir: [testng] [2024-10-20 01:36:25,116] [pool-1-thread-9] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] [2024-10-20 01:36:28,042] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-10-20 01:36:29,301] [pool-1-thread-4] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z_CONTROL.oir: [testng] [2024-10-20 01:36:29,815] [pool-1-thread-9] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-10-20 01:36:34,314] [pool-1-thread-2] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/matl.omp2info: [testng] [2024-10-20 01:36:37,512] [pool-1-thread-1] Initializing /data/qa-17917/f10010.oir: [testng] [2024-10-20 01:37:07,569] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-10-20 01:37:10,435] [pool-1-thread-6] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-10-20 01:37:12,178] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-10-20 01:37:16,634] [pool-1-thread-6] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-10-20 01:37:18,930] [pool-1-thread-11] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [2024-10-20 01:37:22,217] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-10-20 01:37:24,467] [pool-1-thread-6] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-10-20 01:37:28,251] [pool-1-thread-4] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-10-20 01:37:29,257] [pool-1-thread-5] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-10-20 01:37:31,818] [pool-1-thread-6] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-10-20 01:37:35,274] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-10-20 01:37:36,131] [pool-1-thread-6] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-10-20 01:37:40,669] [pool-1-thread-11] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/image_Cycle_02.oir: [testng] [2024-10-20 01:37:41,807] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.oir: [testng] [2024-10-20 01:37:42,151] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] [2024-10-20 01:37:46,503] [pool-1-thread-11] Initializing /data/qa-16881/P10D1 20150729_0024.oir: [testng] [2024-10-20 01:37:46,923] [pool-1-thread-5] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-10-20 01:37:51,982] [pool-1-thread-9] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-10-20 01:37:56,239] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-10-20 01:37:57,516] [pool-1-thread-9] Initializing /data/public/gh-4205/zenodo-13680725/matl.omp2info: [testng] [2024-10-20 01:38:06,188] [pool-1-thread-4] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-10-20 01:38:08,794] [pool-1-thread-11] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] [2024-10-20 01:38:11,260] [pool-1-thread-4] Initializing /data/qa-17335/1.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 10176, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 48 minutes 39 seconds Finished: SUCCESS