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Started by upstream project "BIOFORMATS-test-repo" build number 28 originally caused by: Started by upstream project "Trigger" build number 31 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@7 [BIOFORMATS-test-folder@7] $ /bin/bash -xe /tmp/jenkins4428440861619587959.sh + '[' olympus-oir = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_3591_merge_ci -v /uod/idr/repos/curated/olympus-oir:/data -v /uod/idr-scratch/merge-ci/curated/olympus-oir:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:20:18,076 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:20:18,078 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - No custom configurators were discovered as a service. [testng] 01:20:18,078 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:18,080 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:20:18,082 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:20:18,083 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:20:18,083 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 3 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:20:18,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:18,084 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:20:18,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:20:18,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:20:18,085 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:20:18,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:20:18,292 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:20:18,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:20:18,318 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:20:18,325 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:20:18,325 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:20:18,325 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:20:18,325 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:20:18,325 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@2794eab6 - End of configuration. [testng] 01:20:18,326 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@6c1a5b54 - Registering current configuration as safe fallback point [testng] 01:20:18,326 |-INFO in ch.qos.logback.classic.util.ContextInitializer@3a6bb9bf - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 242 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-04-09 01:20:18,340] [main] java.version = 11.0.16 [testng] 01:20:18,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:20:18,344 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:20:18,393 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-04-09_01-20-18.log] [testng] 01:20:18,395 |-INFO in ch.qos.logback.core.sift.SiftProcessor@642a7222 - End of configuration. [testng] [2024-04-09 01:20:18,398] [main] testng.directory = /data [testng] [2024-04-09 01:20:18,398] [main] testng.configDirectory = /config [testng] [2024-04-09 01:20:18,409] [main] testng.multiplier = 1.0 [testng] [2024-04-09 01:20:18,410] [main] testng.in-memory = false [testng] [2024-04-09 01:20:18,410] [main] testng.allow-missing = false [testng] [2024-04-09 01:20:18,411] [main] user.language = en [testng] [2024-04-09 01:20:18,411] [main] user.country = ${user.country} [testng] [2024-04-09 01:20:18,411] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-04-09 01:20:33,396] [main] ---------------------------------------- [testng] [2024-04-09 01:20:33,396] [main] Total files: 283 [testng] [2024-04-09 01:20:33,396] [main] Scan time: 14.985 s (52 ms/file) [testng] [2024-04-09 01:20:33,397] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 186 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-04-09 01:27:47,925] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.oir: [testng] 01:27:47,926 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 01:27:47,927 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:47,929 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-04-09_01-27-47.log] [testng] 01:27:47,930 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5bc468ce - End of configuration. [testng] [2024-04-09 01:27:48,896] [pool-1-thread-12] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.ome.tif: [testng] 01:27:48,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 01:27:48,897 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:48,897 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-04-09_01-27-48.log] [testng] 01:27:48,898 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6e8f02f2 - End of configuration. [testng] [2024-04-09 01:27:49,001] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0019.oir: [testng] 01:27:49,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 01:27:49,001 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:49,002 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-04-09_01-27-49.log] [testng] 01:27:49,003 |-INFO in ch.qos.logback.core.sift.SiftProcessor@49083ac9 - End of configuration. [testng] [2024-04-09 01:27:49,187] [pool-1-thread-10] Initializing /data/qa-16881/P10D1 20150729.ome.tif: [testng] 01:27:49,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 01:27:49,187 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:49,188 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-04-09_01-27-49.log] [testng] 01:27:49,188 |-INFO in ch.qos.logback.core.sift.SiftProcessor@1d48c1d3 - End of configuration. [testng] [2024-04-09 01:27:49,282] [pool-1-thread-9] Initializing /data/olympus/_stitched 4x4 zstack 10X_XYZ_/stack1/frame_t_0.ets: [testng] 01:27:49,282 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 01:27:49,283 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:49,283 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-04-09_01-27-49.log] [testng] 01:27:49,283 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2d38aa9f - End of configuration. [testng] [2024-04-09 01:27:49,305] [pool-1-thread-8] Initializing /data/olympus/Clipboard-calcium sparks_XYt.tif: [testng] 01:27:49,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 01:27:49,305 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:49,306 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-04-09_01-27-49.log] [testng] 01:27:49,306 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7c21db68 - End of configuration. [testng] [2024-04-09 01:27:49,367] [pool-1-thread-7] Initializing /data/qa-16881/W11-180 D3 20151021_0024.oir: [testng] 01:27:49,367 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 01:27:49,367 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:49,368 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-04-09_01-27-49.log] [testng] 01:27:49,368 |-INFO in ch.qos.logback.core.sift.SiftProcessor@4d91763d - End of configuration. [testng] [2024-04-09 01:27:49,493] [pool-1-thread-6] Initializing /data/qa-17270/alexa488.ome.tif: [testng] 01:27:49,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 01:27:49,493 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:49,494 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-04-09_01-27-49.log] [testng] 01:27:49,495 |-INFO in ch.qos.logback.core.sift.SiftProcessor@640211f2 - End of configuration. [testng] [2024-04-09 01:27:49,569] [pool-1-thread-5] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.ome.tif: [testng] 01:27:49,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 01:27:49,570 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:49,571 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-04-09_01-27-49.log] [testng] 01:27:49,572 |-INFO in ch.qos.logback.core.sift.SiftProcessor@9510fe7 - End of configuration. [testng] [2024-04-09 01:27:49,633] [pool-1-thread-4] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/matl.omp2info: [testng] 01:27:49,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 01:27:49,634 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:49,635 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-04-09_01-27-49.log] [testng] 01:27:49,635 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5c3e7748 - End of configuration. [testng] [2024-04-09 01:27:52,748] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.oir: [testng] 01:27:52,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 01:27:52,748 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:52,749 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-04-09_01-27-52.log] [testng] 01:27:52,750 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21675177 - End of configuration. [testng] [2024-04-09 01:27:52,828] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Clipboard-Image_0043_0001.tif: [testng] 01:27:52,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 01:27:52,829 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:27:52,830 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-04-09_01-27-52.log] [testng] 01:27:52,830 |-INFO in ch.qos.logback.core.sift.SiftProcessor@6d04fbc5 - End of configuration. [testng] [2024-04-09 01:27:56,196] [pool-1-thread-5] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0002.tif: [testng] [2024-04-09 01:27:56,240] [pool-1-thread-2] Initializing /data/qa-16881/W4-0 D14 New 20150828_0007.oir: [testng] [2024-04-09 01:27:56,378] [pool-1-thread-8] Initializing /data/public/etienne/venus stack.ome.tif: [testng] [2024-04-09 01:27:56,507] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10D1 20150729_0024.tif: [testng] [2024-04-09 01:27:56,551] [pool-1-thread-10] Initializing /data/olympus/2021-07-19/FRAP_0006_LSM.oir: [testng] [2024-04-09 01:27:57,039] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-Caged Glu-3 point.tif: [testng] [2024-04-09 01:27:57,095] [pool-1-thread-11] Initializing /data/olympus/2017-04-20/mito_0006_0001.oir: [testng] [2024-04-09 01:27:57,364] [pool-1-thread-6] Initializing /data/olympus/2021-03-23/Dataset01_incl_stitched_image/Stitch_A01_G001_0001.oir: [testng] [2024-04-09 01:27:57,540] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Image_0055_0001.ome.tif: [testng] [2024-04-09 01:27:57,857] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.oir: [testng] [2024-04-09 01:27:58,211] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.oir: [testng] [2024-04-09 01:27:59,293] [pool-1-thread-11] Initializing /data/olympus/calcium sparks_XYt.ome.tif: [testng] [2024-04-09 01:27:59,560] [pool-1-thread-5] Initializing /data/qa-17919/f10187.oir: [testng] [2024-04-09 01:28:14,895] [pool-1-thread-2] Initializing /data/public/etienne/venus stack.oir: [testng] [2024-04-09 01:28:15,232] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0058/Clipboard-Image_0058_0001.tif: [testng] [2024-04-09 01:28:15,306] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Clipboard-Image_0033_0001.tif: [testng] [2024-04-09 01:28:15,376] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Image_0091_0001.ome.tif: [testng] [2024-04-09 01:28:15,452] [pool-1-thread-7] Initializing /data/qa-17331/60x zstack RS.oir: [testng] [2024-04-09 01:28:15,651] [pool-1-thread-1] Initializing /data/qa-17331/60x zstack RS.ome.tif: [testng] [2024-04-09 01:28:16,446] [pool-1-thread-9] Initializing /data/olympus/XYZt.vsi: [testng] [2024-04-09 01:28:16,718] [pool-1-thread-3] Initializing /data/qa-17222/ps245 red tubulin green 60x_5ADVMLE-1.oir.vsi: [testng] [2024-04-09 01:28:16,965] [pool-1-thread-12] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001_5ADVMLE.oir.vsi: [testng] [2024-04-09 01:28:17,128] [pool-1-thread-8] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.oir: [testng] [2024-04-09 01:28:17,644] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Image_0064_0001.ome.tif: [testng] [2024-04-09 01:28:17,720] [pool-1-thread-10] Initializing /data/qa-17270/stack1.oir: [testng] [2024-04-09 01:28:19,047] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0055/Clipboard-Image_0055_0001.tif: [testng] [2024-04-09 01:28:19,109] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729.oir: [testng] [2024-04-09 01:28:19,382] [pool-1-thread-12] Initializing /data/cudmore/20190401__0005.oir: [testng] [2024-04-09 01:28:24,974] [pool-1-thread-9] Initializing /data/qa-16881/Clipboard-W4-0 D14 New 20150828_0007.tif: [testng] [2024-04-09 01:28:25,054] [pool-1-thread-6] Initializing /data/qa-16881/W11-180 D3 20151021_0006.oir: [testng] [2024-04-09 01:28:25,187] [pool-1-thread-2] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x_0001.tif: [testng] [2024-04-09 01:28:25,373] [pool-1-thread-11] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002.oir: [testng] [2024-04-09 01:28:26,104] [pool-1-thread-7] Initializing /data/qa-17270/stack1.ome.tif: [testng] [2024-04-09 01:28:26,302] [pool-1-thread-3] Initializing /data/qa-17331/Clipboard.tif: [testng] [2024-04-09 01:28:26,501] [pool-1-thread-1] Initializing /data/qa-16881/Clipboard-W11-180 D3 20151021_0006.tif: [testng] [2024-04-09 01:28:26,729] [pool-1-thread-6] Initializing /data/samples/channel-reorder/Stitched_XYZ-modified.oir: [testng] [2024-04-09 01:28:26,918] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x_0002_5ADVMLE.oir.vsi: [testng] [2024-04-09 01:28:27,359] [pool-1-thread-9] Initializing /data/qa-16881/W11-180 D3 20151021_0024.ome.tif: [testng] [2024-04-09 01:28:27,721] [pool-1-thread-2] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.ome.tif: [testng] [2024-04-09 01:28:28,613] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2.oir: [testng] [2024-04-09 01:28:28,797] [pool-1-thread-3] Initializing /data/olympus/XYZt.ome.tif: [testng] [2024-04-09 01:28:29,018] [pool-1-thread-1] Initializing /data/olympus/2021-04-20/overview 2 x_Cycle_01/matl.omp2info: [testng] 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[2024-04-09 01:28:39,803] [pool-1-thread-10] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.ome.tif: [testng] [2024-04-09 01:28:40,248] [pool-1-thread-6] Initializing /data/olympus/2017-04-21/zebra shg.oir: [testng] [2024-04-09 01:28:48,286] [pool-1-thread-9] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.ome.tif: [testng] [2024-04-09 01:28:48,535] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.oir: [testng] [2024-04-09 01:28:49,872] [pool-1-thread-11] Initializing /data/qa-17335/OSR-Z.ome.tif: [testng] [2024-04-09 01:28:50,275] [pool-1-thread-1] Initializing /data/qa-16881/P10D1 20150729_0024.ome.tif: [testng] [2024-04-09 01:28:50,429] [pool-1-thread-9] Initializing /data/qa-16881/P10D1 20150729_0019.oir: [testng] [2024-04-09 01:28:50,693] [pool-1-thread-8] Initializing /data/olympus/not_opening_in_ImageJ/Image_0099/Image_0099_0001.oir: [testng] [2024-04-09 01:28:50,874] [pool-1-thread-3] Initializing /data/olympus/not_opening_in_ImageJ/Image_0043/Image_0043_0001.ome.tif: [testng] [2024-04-09 01:28:51,287] [pool-1-thread-10] Initializing /data/public/etienne/Clipboard-amy slice z stack_0001.tif: [testng] [2024-04-09 01:28:52,476] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-stack1.tif: [testng] [2024-04-09 01:28:52,747] [pool-1-thread-11] Initializing /data/qa-16881/Clipboard-W1-75 D11 New 20150825_0004.tif: [testng] [2024-04-09 01:28:52,976] [pool-1-thread-8] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.oir: [testng] [2024-04-09 01:28:53,353] [pool-1-thread-3] Initializing /data/olympus/Clipboard-40X_4CH_XY.tif: [testng] [2024-04-09 01:28:54,071] [pool-1-thread-1] Initializing /data/olympus/2017-04-21/SampleImagesWS/PA-GFPv-2.oir: [testng] [2024-04-09 01:28:55,028] [pool-1-thread-9] Initializing /data/qa-17222/Clipboard-ps245 red tubulin green 60x.tif: [testng] [2024-04-09 01:28:55,096] [pool-1-thread-10] Initializing /data/qa-17222/ps245 red tubulin green 60x.oir: [testng] [2024-04-09 01:28:56,667] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/xytz_golgi/xytz_golgi.oir: [testng] [2024-04-09 01:28:58,090] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Clipboard-Image_0001_0001.tif: [testng] [2024-04-09 01:28:58,583] [pool-1-thread-3] Initializing /data/qa-16881/W4-45 D5 New 20150816_0011.oir: [testng] [2024-04-09 01:28:59,460] [pool-1-thread-9] Initializing /data/qa-17409/Stitch_A01_G001-exported.ome.tif: [testng] [2024-04-09 01:29:00,368] [pool-1-thread-8] Initializing /data/olympus/2017-11-20/stimulation_exp/stimulation_exp.oir: [testng] [2024-04-09 01:29:09,382] [pool-1-thread-10] Initializing /data/qa-16881/Clipboard-P10-50 D2_0006.tif: [testng] [2024-04-09 01:29:10,087] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0091/Clipboard-Image_0091_0001.tif: [testng] [2024-04-09 01:29:10,219] [pool-1-thread-3] Initializing 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[pool-1-thread-9] Initializing /data/qa-21508/Stitch_A01_G008.oir: [testng] [2024-04-09 01:34:19,661] [pool-1-thread-2] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.oir: [testng] [2024-04-09 01:34:19,917] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Clipboard-Image_0106_0001.tif: [testng] [2024-04-09 01:34:20,221] [pool-1-thread-4] Initializing /data/qa-17335/stimulation_0001_LSM.ome.tif: [testng] [2024-04-09 01:34:21,290] [pool-1-thread-2] Initializing /data/olympus/calcium sparks.jpg: [testng] [2024-04-09 01:34:21,557] [pool-1-thread-11] Initializing /data/olympus/2017-04-21/Clipboard.tif: [testng] [2024-04-09 01:34:22,014] [pool-1-thread-4] Initializing /data/olympus/Stitched_XYZ.oir: [testng] [2024-04-09 01:34:22,890] [pool-1-thread-12] Initializing /data/public/etienne/coupe shg stack_0001.ome.tif: [testng] [2024-04-09 01:34:23,260] [pool-1-thread-11] Initializing /data/qa-17293/2-z-t_0001_LSM.oir: [testng] [2024-04-09 01:34:24,084] [pool-1-thread-2] Initializing /data/gh-3779/10kDa.P19.ZDC.7xConcentrationAlexProtocol.HomogenizedDex.oir: [testng] [2024-04-09 01:34:25,445] [pool-1-thread-11] Initializing /data/qa-16871/Clipboard.tif: [testng] [2024-04-09 01:34:25,515] [pool-1-thread-12] Initializing /data/qa-17409/Clipboard.tif: [testng] [2024-04-09 01:34:26,059] [pool-1-thread-4] Initializing /data/qa-17409/Stitch_A01_G001.oir: [testng] [2024-04-09 01:34:28,318] [pool-1-thread-8] Initializing /data/olympus/2021-07-19/2021-07-19 15_37_09-Original Metadata - FRAP_0006_LSM.oir.png: [testng] [2024-04-09 01:34:28,616] [pool-1-thread-8] Initializing /data/qa-17222/ps245 red tubulin green 60x.ome.tif: [testng] [2024-04-09 01:34:29,141] [pool-1-thread-12] Initializing /data/olympus/2021-03-23/Dataset02_incl_stitched_image/Stitch_A01_G001.oir: [testng] [2024-04-09 01:34:29,596] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0106/Image_0106_0001.ome.tif: [testng] [2024-04-09 01:34:30,731] [pool-1-thread-2] Initializing /data/qa-16881/Clipboard-P10D1 20150729.tif: [testng] [2024-04-09 01:34:30,909] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0064/Clipboard-Image_0064_0001.tif: [testng] [2024-04-09 01:34:31,200] [pool-1-thread-8] Initializing /data/qa-17335/OSR-Z.oir: [testng] [2024-04-09 01:34:32,097] [pool-1-thread-2] Initializing /data/qa-17270/Clipboard-image1.tif: [testng] [2024-04-09 01:34:32,381] [pool-1-thread-11] Initializing /data/qa-17293/Clipboard.tif: [testng] [2024-04-09 01:34:32,442] [pool-1-thread-8] Initializing /data/qa-18802/20171020_JupGFPHisRFP_L3_30xSI_galvo_p5z_p1xy_better_than_nyquist.oir: [testng] [2024-04-09 01:34:45,379] [pool-1-thread-7] Initializing /data/olympus/not_opening_in_ImageJ/Image_0079/Image_0079_0001.oir: [testng] [2024-04-09 01:34:46,107] [pool-1-thread-4] Initializing /data/public/etienne/coupe shg stack_0001.oir: [testng] [2024-04-09 01:34:46,430] [pool-1-thread-7] Initializing /data/qa-17335/1.oir: [testng] [2024-04-09 01:34:46,497] [pool-1-thread-2] Initializing /data/qa-17222/ps245 red tubulin green 60x_0001.oir: [testng] [2024-04-09 01:34:46,858] [pool-1-thread-11] Initializing /data/qa-16881/P10-50 D2_0006.oir: [testng] [2024-04-09 01:34:47,351] [pool-1-thread-12] Initializing /data/qa-17293/2-z-t_0001_LSM.ome.tif: [testng] [2024-04-09 01:34:47,734] [pool-1-thread-7] Initializing /data/olympus/40X_4CH_XY.vsi: [testng] [2024-04-09 01:34:48,458] [pool-1-thread-11] Initializing /data/olympus/not_opening_in_ImageJ/Image_0001/Image_0001_0001.ome.tif: [testng] [2024-04-09 01:34:48,594] [pool-1-thread-4] Initializing /data/olympus/stitched 4x4 zstack 10X_XYZ.ome.tif: [testng] [2024-04-09 01:34:49,874] [pool-1-thread-12] Initializing /data/olympus/not_opening_in_ImageJ/Image_0033/Image_0033_0001.oir: [testng] [2024-04-09 01:34:49,997] [pool-1-thread-2] Initializing /data/olympus/Clipboard-XYZt.tif: [testng] [2024-04-09 01:34:50,782] [pool-1-thread-12] Initializing /data/qa-16871/XY_0003.ome.tif: [testng] [2024-04-09 01:34:50,895] [pool-1-thread-11] Initializing /data/qa-17270/Clipboard-alexa488.tif: [testng] [2024-04-09 01:34:51,249] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/Clipboard-CagedATP Cag10.tif: [testng] [2024-04-09 01:34:51,409] [pool-1-thread-2] Initializing /data/public/etienne/Clipboard-coupe shg stack_0001.tif: [testng] [2024-04-09 01:34:52,133] [pool-1-thread-12] Initializing /data/qa-16881/Clipboard-P10-50 D2.tif: [testng] [2024-04-09 01:34:52,711] [pool-1-thread-11] Initializing /data/olympus/2021-04-20/20x_MATL_Cycle/Stitch_A01_G001.oir: [testng] [2024-04-09 01:34:53,217] [pool-1-thread-7] Initializing /data/olympus/spectral_scan_XYL.ome.tif: [testng] [2024-04-09 01:34:53,984] [pool-1-thread-2] Initializing /data/olympus/2017-04-20/Clipboard.tif: [testng] [2024-04-09 01:34:54,169] [pool-1-thread-12] Initializing /data/olympus/2017-04-20/mito_0006_0001.ome.tif: [testng] [2024-04-09 01:34:54,874] [pool-1-thread-8] Initializing /data/olympus/Clipboard-Stitched_XYZ.tif: [testng] [2024-04-09 01:34:55,289] [pool-1-thread-12] Initializing /data/qa-21577/R13L-S2-5_X20_ZOOM1_Z.oir: [testng] [2024-04-09 01:34:56,229] [pool-1-thread-2] Initializing /data/qa-16881/W11-180 D3 20151021_0006.ome.tif: [testng] [2024-04-09 01:34:56,753] [pool-1-thread-4] Initializing /data/olympus/not_opening_in_ImageJ/Image_0050/Image_0050_0001.ome.tif: [testng] [2024-04-09 01:34:56,812] [pool-1-thread-7] Initializing /data/olympus/2017-04-21/SampleImagesWS/LILY POLLEN.ome.tif: [testng] [2024-04-09 01:34:57,691] [pool-1-thread-9] Initializing /data/qa-17335/Clipboard-OSR-Z.tif: [testng] [2024-04-09 01:34:58,466] [pool-1-thread-1] Initializing /data/public/etienne/amy slice z stack_0001.ome.tif: [testng] [2024-04-09 01:34:58,823] [pool-1-thread-8] Initializing /data/qa-16881/W1-135 D6 New 20150818_0010.oir: [testng] [2024-04-09 01:34:59,137] [pool-1-thread-4] Initializing /data/olympus/2017-04-21/SampleImagesWS/CagedATP CaG10.ome.tif: [testng] [2024-04-09 01:34:59,783] [pool-1-thread-2] Initializing /data/olympus/2017-11-20/fish_overview/fish-overview-night.oir: [testng] [2024-04-09 01:35:47,101] [pool-1-thread-5] Initializing /data/qa-16881/Clipboard-W4-45 D5 New 20150816_0011.tif: [testng] [2024-04-09 01:35:47,267] [pool-1-thread-7] Initializing /data/olympus/Clipboard-spectral_scan_XYL.tif: [testng] [2024-04-09 01:35:47,319] [pool-1-thread-9] Initializing /data/olympus/2017-04-21/SampleImagesWS/Caged Glu-3 point.ome.tif: [testng] [2024-04-09 01:35:47,768] [pool-1-thread-12] Initializing /data/olympus/spectral_scan_XYL.oir: [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 9858, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 46 minutes 36 seconds Finished: SUCCESS