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Started by upstream project "BIOFORMATS-test-repo" build number 231 originally caused by: Started by upstream project "Trigger" build number 256 originally caused by: Started by timer Running as SYSTEM Building remotely on docker (swarm) in workspace /home/omero/workspace/BIOFORMATS-test-folder@6 [BIOFORMATS-test-folder@6] $ /bin/bash -xe /tmp/jenkins1980006395266184493.sh + '[' fv1000 = slidebook ']' ++ date +%u + '[' 2 -le 1 ']' + sudo docker run --rm --name BIOFORMATS-test-folder_36241_merge_ci -v /uod/idr/repos/curated/fv1000:/data -v /uod/idr-scratch/merge-ci/curated/fv1000:/config snoopycrimecop/bioformats:merge_ci -Dtestng.memory=15g -Dtestng.threadCount=12 Buildfile: /bio-formats-build/bioformats/components/test-suite/build.xml [echo] isSnapshot = true init-title: [echo] ----------=========== bio-formats-testing-framework ===========---------- init-timestamp: init: copy-resources: compile: [resolver:resolve] Resolving artifacts compile-tests: [resolver:resolve] Resolving artifacts [javac] Compiling 1 source file to /bio-formats-build/bioformats/components/test-suite/test [javac] warning: [options] bootstrap class path not set in conjunction with -source 8 [javac] 1 warning test-automated: [testng] WARNING: An illegal reflective access operation has occurred [testng] WARNING: Illegal reflective access by org.kohsuke.file_leak_detector.Listener (file:/home/build/.m2/repository/org/kohsuke/file-leak-detector/1.18/file-leak-detector-1.18-jar-with-dependencies.jar) to field java.net.SocketImpl.socket [testng] WARNING: Please consider reporting this to the maintainers of org.kohsuke.file_leak_detector.Listener [testng] WARNING: Use --illegal-access=warn to enable warnings of further illegal reflective access operations [testng] WARNING: All illegal access operations will be denied in a future release [testng] File leak detector installed [testng] 01:51:46,982 |-INFO in ch.qos.logback.classic.LoggerContext[default] - This is logback-classic version 1.3.14 [testng] 01:51:46,984 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - No custom configurators were discovered as a service. [testng] 01:51:46,984 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:51:46,984 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.joran.SerializedModelConfigurator [testng] 01:51:46,985 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.scmo] [testng] 01:51:46,985 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.scmo] [testng] 01:51:46,986 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.joran.SerializedModelConfigurator.configure() call lasted 2 milliseconds. ExecutionStatus=INVOKE_NEXT_IF_ANY [testng] 01:51:46,986 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Trying to configure with ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:51:46,986 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - Constructed configurator of type class ch.qos.logback.classic.util.DefaultJoranConfigurator [testng] 01:51:46,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [${logback.configurationFile}] [testng] 01:51:46,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml] [testng] 01:51:46,987 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [file:/bio-formats-build/bioformats/components/test-suite/logback.xml] [testng] 01:51:47,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [stdout] [testng] 01:51:47,154 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender] [testng] 01:51:47,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [SIFT] [testng] 01:51:47,176 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [ch.qos.logback.classic.sift.SiftingAppender] [testng] 01:51:47,182 |-INFO in ch.qos.logback.classic.model.processor.LoggerModelHandler - Setting level of logger [loci.tests.testng] to DEBUG [testng] 01:51:47,182 |-INFO in ch.qos.logback.classic.model.processor.RootLoggerModelHandler - Setting level of ROOT logger to INFO [testng] 01:51:47,182 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [SIFT] to Logger[ROOT] [testng] 01:51:47,182 |-INFO in ch.qos.logback.core.model.processor.AppenderRefModelHandler - Attaching appender named [stdout] to Logger[loci.tests.testng] [testng] 01:51:47,182 |-INFO in ch.qos.logback.core.model.processor.DefaultProcessor@45099dd3 - End of configuration. [testng] 01:51:47,183 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@60099951 - Registering current configuration as safe fallback point [testng] 01:51:47,183 |-INFO in ch.qos.logback.classic.util.ContextInitializer@65f095f8 - ch.qos.logback.classic.util.DefaultJoranConfigurator.configure() call lasted 197 milliseconds. ExecutionStatus=DO_NOT_INVOKE_NEXT_IF_ANY [testng] [2024-10-22 01:51:47,192] [main] java.version = 11.0.16 [testng] 01:51:47,195 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 01:51:47,195 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 01:51:47,238 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-22_01-51-47.log] [testng] 01:51:47,240 |-INFO in ch.qos.logback.core.sift.SiftProcessor@21be3395 - End of configuration. [testng] [2024-10-22 01:51:47,241] [main] testng.directory = /data [testng] [2024-10-22 01:51:47,242] [main] testng.configDirectory = /config [testng] [2024-10-22 01:51:47,254] [main] testng.multiplier = 1.0 [testng] [2024-10-22 01:51:47,256] [main] testng.in-memory = false [testng] [2024-10-22 01:51:47,256] [main] testng.allow-missing = false [testng] [2024-10-22 01:51:47,256] [main] user.language = en [testng] [2024-10-22 01:51:47,256] [main] user.country = ${user.country} [testng] [2024-10-22 01:51:47,256] [main] Maximum heap size = 15360 MB [testng] Scanning for files... [testng] [2024-10-22 01:52:39,955] [main] ---------------------------------------- [testng] [2024-10-22 01:52:39,955] [main] Total files: 259 [testng] [2024-10-22 01:52:39,955] [main] Scan time: 52.699 s (203 ms/file) [testng] [2024-10-22 01:52:39,955] [main] ---------------------------------------- [testng] Building list of tests... [testng] Ready to test 144 files [testng] [TestNG] Running: [testng] Bio-Formats software test suite [testng] [testng] [2024-10-22 02:01:48,435] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG7.oib: [testng] 02:01:48,435 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-1] [testng] 02:01:48,436 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:01:48,438 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-1] - File property is set to [target/bio-formats-test-pool-1-thread-1-2024-10-22_02-01-48.log] [testng] 02:01:48,439 |-INFO in ch.qos.logback.core.sift.SiftProcessor@412be3d0 - End of configuration. [testng] [2024-10-22 02:01:48,873] [pool-1-thread-12] Initializing /data/aryeh/030408 2 1.oib: [testng] 02:01:48,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-12] [testng] 02:01:48,873 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:01:48,874 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-12] - File property is set to [target/bio-formats-test-pool-1-thread-12-2024-10-22_02-01-48.log] [testng] 02:01:48,874 |-INFO in ch.qos.logback.core.sift.SiftProcessor@78d6f51d - End of configuration. [testng] [2024-10-22 02:01:49,498] [pool-1-thread-11] Initializing /data/molly/13SH2bUTRtime4b.oib: [testng] 02:01:49,498 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-11] [testng] 02:01:49,499 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:01:49,499 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-11] - File property is set to [target/bio-formats-test-pool-1-thread-11-2024-10-22_02-01-49.log] [testng] 02:01:49,500 |-INFO in ch.qos.logback.core.sift.SiftProcessor@11c72f35 - End of configuration. [testng] [2024-10-22 02:01:50,070] [pool-1-thread-10] Initializing /data/marc/V0606J.oib: [testng] 02:01:50,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-10] [testng] 02:01:50,070 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:01:50,071 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-10] - File property is set to [target/bio-formats-test-pool-1-thread-10-2024-10-22_02-01-50.log] [testng] 02:01:50,071 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7ed80dcc - End of configuration. [testng] [2024-10-22 02:01:51,628] [pool-1-thread-9] Initializing /data/johannes/step4.bmp: [testng] 02:01:51,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-9] [testng] 02:01:51,628 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:01:51,629 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-9] - File property is set to [target/bio-formats-test-pool-1-thread-9-2024-10-22_02-01-51.log] [testng] 02:01:51,629 |-INFO in ch.qos.logback.core.sift.SiftProcessor@59ca39eb - End of configuration. [testng] [2024-10-22 02:01:51,679] [pool-1-thread-8] Initializing /data/karl/Image0009.oib: [testng] 02:01:51,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-8] [testng] 02:01:51,679 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:01:51,680 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-8] - File property is set to [target/bio-formats-test-pool-1-thread-8-2024-10-22_02-01-51.log] [testng] 02:01:51,680 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2941939a - End of configuration. [testng] [2024-10-22 02:01:51,963] [pool-1-thread-7] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oib: [testng] 02:01:51,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-7] [testng] 02:01:51,963 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:01:51,964 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-7] - File property is set to [target/bio-formats-test-pool-1-thread-7-2024-10-22_02-01-51.log] [testng] 02:01:51,964 |-INFO in ch.qos.logback.core.sift.SiftProcessor@5a70bcda - End of configuration. [testng] [2024-10-22 02:01:52,529] [pool-1-thread-6] Initializing /data/aryeh/061010 plate 1/Image0002_07.oib: [testng] 02:01:52,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 02:01:52,529 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:01:52,529 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-22_02-01-52.log] [testng] 02:01:52,530 |-INFO in ch.qos.logback.core.sift.SiftProcessor@2965cd1 - End of configuration. [testng] [2024-10-22 02:01:53,091] [pool-1-thread-5] Initializing /data/molly/11OCT2.OIF: [testng] 02:01:53,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-5] [testng] 02:01:53,091 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:01:53,092 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-5] - File property is set to [target/bio-formats-test-pool-1-thread-5-2024-10-22_02-01-53.log] [testng] 02:01:53,092 |-INFO in ch.qos.logback.core.sift.SiftProcessor@81a788f - End of configuration. [testng] [2024-10-22 02:02:05,709] [pool-1-thread-4] Initializing /data/shane/Data Subset/MHC1_control.oif: [testng] 02:02:05,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-4] [testng] 02:02:05,709 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:02:05,710 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-4] - File property is set to [target/bio-formats-test-pool-1-thread-4-2024-10-22_02-02-05.log] [testng] 02:02:05,711 |-INFO in ch.qos.logback.core.sift.SiftProcessor@73c3de9d - End of configuration. [testng] [2024-10-22 02:02:06,032] [pool-1-thread-3] Initializing /data/glen/15min 200neo lyso SO1.oib: [testng] 02:02:06,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-3] [testng] 02:02:06,032 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:02:06,033 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-3] - File property is set to [target/bio-formats-test-pool-1-thread-3-2024-10-22_02-02-06.log] [testng] 02:02:06,033 |-INFO in ch.qos.logback.core.sift.SiftProcessor@7f20f1f5 - End of configuration. [testng] [2024-10-22 02:02:06,346] [pool-1-thread-2] Initializing /data/brian/Lambda10nm.oib: [testng] 02:02:06,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-2] [testng] 02:02:06,346 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 02:02:06,346 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-2] - File property is set to [target/bio-formats-test-pool-1-thread-2-2024-10-22_02-02-06.log] [testng] 02:02:06,347 |-INFO in ch.qos.logback.core.sift.SiftProcessor@3880da5a - End of configuration. [testng] [2024-10-22 02:02:09,405] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/2.oib: [testng] [2024-10-22 02:02:09,966] [pool-1-thread-8] Initializing /data/glen/simulstack.oif: [testng] [2024-10-22 02:02:12,291] [pool-1-thread-2] Initializing /data/molly/11OCT4.OIF: [testng] [2024-10-22 02:02:18,540] [pool-1-thread-1] Initializing /data/barbara/Image_with_working_import.oib: [testng] [2024-10-22 02:02:18,867] [pool-1-thread-12] Initializing /data/glen/notsaturated.oib: [testng] [2024-10-22 02:02:19,337] [pool-1-thread-3] Initializing /data/brian/MitoRed-POPO3.oib: [testng] [2024-10-22 02:02:19,857] [pool-1-thread-11] Initializing /data/glen/simulstack.oib: [testng] [2024-10-22 02:02:20,413] [pool-1-thread-7] Initializing /data/brian/Caged Glu-3 point.oib: [testng] [2024-10-22 02:02:21,799] [pool-1-thread-6] Initializing /data/brian/NEURON_TIMELAPS_2.oib: [testng] [2024-10-22 02:02:26,026] [pool-1-thread-9] Initializing /data/david/Image0016.oif: [testng] [2024-10-22 02:02:27,462] [pool-1-thread-1] Initializing /data/stefan/cytosol_08b.oif: [testng] [2024-10-22 02:02:33,018] [pool-1-thread-3] Initializing /data/stefan/test-with-stefan071024.oib: [testng] [2024-10-22 02:02:35,118] [pool-1-thread-12] Initializing /data/aryeh/PIP2 ESCV control Z 1.oib: [testng] [2024-10-22 02:02:35,911] [pool-1-thread-10] Initializing /data/shane/Data Subset/EX5-10 fresh sol.oib: [testng] [2024-10-22 02:02:37,555] [pool-1-thread-11] Initializing /data/qa-17748/Image0098.oib: [testng] [2024-10-22 02:02:37,963] [pool-1-thread-7] Initializing /data/chris/missegragation-15.oib: [testng] [2024-10-22 02:02:38,402] [pool-1-thread-6] Initializing /data/simon/used_to_work.oib: [testng] [2024-10-22 02:02:40,276] [pool-1-thread-4] Initializing /data/brian/LILY POLLEN.oib: [testng] [2024-10-22 02:02:41,647] [pool-1-thread-10] Initializing /data/johannes/step5b.bmp: [testng] [2024-10-22 02:02:42,379] [pool-1-thread-12] Initializing /data/johannes/Image0010/Image0010.oif: [testng] [2024-10-22 02:02:44,366] [pool-1-thread-11] Initializing /data/molly/11OCT10.OIF: [testng] [2024-10-22 02:03:01,034] [pool-1-thread-7] Initializing /data/molly/11OCT9.OIF: [testng] [2024-10-22 02:03:24,346] [pool-1-thread-10] Initializing /data/ramon/Image_01_01_01_01.oif: [testng] [2024-10-22 02:03:25,424] [pool-1-thread-3] Initializing /data/stefan/121206_IHC_Ncad_647_in_515_WT_36hpf_e1.oib: [testng] [2024-10-22 02:03:26,442] [pool-1-thread-6] Initializing /data/stefan/yc2_live-03.oib: [testng] [2024-10-22 02:03:27,627] [pool-1-thread-4] Initializing /data/johannes/Image0006/Image0006.oif: [testng] [2024-10-22 02:03:31,640] [pool-1-thread-3] Initializing /data/shane/Data Subset/EX5-10 fresh plan.oib: [testng] [2024-10-22 02:03:35,817] [pool-1-thread-6] Initializing /data/molly/11OCT3.OIF: [testng] [2024-10-22 02:04:26,875] [pool-1-thread-3] Initializing /data/molly/11OCT7.OIF: [testng] [2024-10-22 02:04:36,344] [pool-1-thread-9] Initializing /data/johannes/Image0016/Image0016.oif: [testng] [2024-10-22 02:05:55,589] [pool-1-thread-10] Initializing /data/aryeh/PIP2 ESCV Z 1 after.oib: [testng] [2024-10-22 02:05:58,259] [pool-1-thread-12] Initializing /data/allan/62909#1.oib: [testng] [2024-10-22 02:05:59,939] [pool-1-thread-4] Initializing /data/alex/31h_pea3_fgf10_01_1.oif: [testng] [2024-10-22 02:06:06,359] [pool-1-thread-12] Initializing /data/molly/11OCT5.OIF: [testng] [2024-10-22 02:06:21,631] [pool-1-thread-10] Initializing /data/qa-17748/Image0079.oib: [testng] [2024-10-22 02:06:25,346] [pool-1-thread-10] Initializing /data/aryeh/BP3 3h ch2.oif: [testng] [2024-10-22 02:09:16,654] [pool-1-thread-9] Initializing /data/tom/RGB-1.avi: [testng] [2024-10-22 02:09:21,176] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oif: [testng] [2024-10-22 02:10:42,915] [pool-1-thread-9] Initializing /data/aryeh/061010 plate 1/Image0002_01.oib: [testng] [2024-10-22 02:10:53,608] [pool-1-thread-9] Initializing /data/jae/Image0001.oib: [testng] [2024-10-22 02:11:01,831] [pool-1-thread-9] Initializing /data/shane/Data Subset/Ex3sol.oif: [testng] [2024-10-22 02:11:41,680] [pool-1-thread-9] Initializing /data/brian/PA-GFPv-2.oib: [testng] [2024-10-22 02:11:47,974] [pool-1-thread-9] Initializing /data/glen/singlesimul.oif: [testng] [2024-10-22 02:12:48,122] [pool-1-thread-9] Initializing /data/jcb/200909024/Sup Fig 2/4.oib: [testng] [2024-10-22 02:12:54,539] [pool-1-thread-9] Initializing /data/michael/CELL3.oib: [testng] [2024-10-22 02:13:01,438] [pool-1-thread-9] Initializing /data/simon/never_worked.oib: [testng] [2024-10-22 02:13:12,219] [pool-1-thread-9] Initializing /data/aryeh/control_test.oib: [testng] [2024-10-22 02:13:43,666] [pool-1-thread-9] Initializing /data/brian/lambda02nm.oib: [testng] [2024-10-22 02:13:49,926] [pool-1-thread-9] Initializing /data/stephane/817A_3-0003_01.oib: [testng] [2024-10-22 02:13:55,098] [pool-1-thread-9] Initializing /data/johannes/step1.bmp: [testng] [2024-10-22 02:13:57,882] [pool-1-thread-9] Initializing /data/dan/outerEV1solu6new.oib: [testng] [2024-10-22 02:14:02,691] [pool-1-thread-9] Initializing /data/brian/CagedATP CaG7a.oib: [testng] [2024-10-22 02:14:08,238] [pool-1-thread-9] Initializing /data/yoshihito/XY.oif: [testng] [2024-10-22 02:14:34,105] [pool-1-thread-9] Initializing /data/lavinia/NM1-RibA-RibB-side.oib: [testng] [2024-10-22 02:14:40,780] [pool-1-thread-9] Initializing /data/kashif/OIF_V1/Sample_XYZ.oif: [testng] [2024-10-22 02:18:51,803] [pool-1-thread-8] Initializing /data/glen/111407.oif: [testng] [2024-10-22 02:27:12,510] [pool-1-thread-2] Initializing /data/brian/FLIP.oib: [testng] [2024-10-22 02:27:20,947] [pool-1-thread-2] Initializing /data/glen/QuitIJ/06-1728brnc3my.oib: [testng] [2024-10-22 02:27:29,490] [pool-1-thread-4] Initializing /data/shane/Data Subset/EXX7-10G30% .oib: [testng] [2024-10-22 02:27:30,278] [pool-1-thread-2] Initializing /data/jean-claude/villositerat0heurea.oib: [testng] [2024-10-22 02:27:35,467] [pool-1-thread-2] Initializing /data/glen/Null file/test change.oif: [testng] [2024-10-22 02:27:36,750] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_04.oib: [testng] [2024-10-22 02:27:44,998] [pool-1-thread-4] Initializing /data/molly/11OCT8.OIF: [testng] [2024-10-22 02:28:48,482] [pool-1-thread-2] Initializing /data/paul/Day 4 1 FBS flat - cell 6 - green.oib: [testng] [2024-10-22 02:28:58,320] [pool-1-thread-2] Initializing /data/bojana/XYT_FirstBolus.oib: [testng] [2024-10-22 02:29:09,861] [pool-1-thread-2] Initializing /data/molly/11OCT6.OIF: [testng] [2024-10-22 02:30:33,755] [pool-1-thread-9] Initializing /data/glen/singlesimul.oib: [testng] [2024-10-22 02:30:41,288] [pool-1-thread-9] Initializing /data/daniel/M1(0 0 146)-r1-drift8_3-6-3s_4Hz_0.006cpp_fillfact-0.25-0.488mspl-3x.oib: [testng] [2024-10-22 02:31:00,914] [pool-1-thread-3] Initializing /data/christian/20min.oif: [testng] [2024-10-22 02:31:16,570] [pool-1-thread-9] Initializing /data/marc/V0606L.oib: [testng] [2024-10-22 02:31:36,635] [pool-1-thread-9] Initializing /data/kashif/OIF_V2/Sample_XYZ.oif: [testng] [2024-10-22 02:31:42,802] [pool-1-thread-3] Initializing /data/shane/Data Subset/NESTIN_control2.oif: [testng] [2024-10-22 02:32:37,257] [pool-1-thread-3] Initializing /data/johannes/step4b.bmp: [testng] [2024-10-22 02:32:39,976] [pool-1-thread-3] Initializing /data/barbara/Image_with_failed_import.oib: [testng] [2024-10-22 02:32:44,677] [pool-1-thread-3] Initializing /data/aryeh/1h.oib: [testng] [2024-10-22 02:32:58,606] [pool-1-thread-3] Initializing /data/brian/PA-GFP-3.oib: [testng] [2024-10-22 02:33:06,107] [pool-1-thread-3] Initializing /data/glen/QuitIJ/4202A2chtest.oif: [testng] [2024-10-22 02:34:54,872] [pool-1-thread-12] Initializing /data/johannes/Image0006/Image0006.oif.files/Image0006_Thumb.bmp: [testng] [2024-10-22 02:34:56,447] [pool-1-thread-12] Initializing /data/david/Image0016.oib: [testng] [2024-10-22 02:34:59,230] [pool-1-thread-1] Initializing /data/monica/Image0056.oif: [testng] [2024-10-22 02:35:04,914] [pool-1-thread-12] Initializing /data/glen/Image0002.oif: [testng] [2024-10-22 02:36:01,262] [pool-1-thread-1] Initializing /data/brian/Kaede-Neuron-9 405XYZ1.oib: [testng] [2024-10-22 02:36:08,199] [pool-1-thread-1] Initializing /data/yasunori/series_1.oib: [testng] [2024-10-22 02:36:14,793] [pool-1-thread-1] Initializing /data/aryeh/1h_after_pdt.oib: [testng] [2024-10-22 02:36:45,835] [pool-1-thread-1] Initializing /data/brian/CagedATP CaG+FuraR3_a.oib: [testng] [2024-10-22 02:36:53,414] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_09.oib: [testng] [2024-10-22 02:37:01,645] [pool-1-thread-1] Initializing /data/johannes/step3.bmp: [testng] [2024-10-22 02:37:05,199] [pool-1-thread-1] Initializing /data/satoshi/60x_5x_1.oif: [testng] [2024-10-22 02:41:15,116] [pool-1-thread-8] Initializing /data/brian/Kaede-Neuron-9XYZ.oib: [testng] [2024-10-22 02:41:21,335] [pool-1-thread-8] Initializing /data/kay/IM2pg.oib: [testng] [2024-10-22 02:41:28,663] [pool-1-thread-8] Initializing /data/aryeh/061010 plate 1/Image0002_02.oib: [testng] [2024-10-22 02:41:30,812] [pool-1-thread-11] Initializing /data/francesco/fGfp.c15.oib: [testng] [2024-10-22 02:41:36,541] [pool-1-thread-8] Initializing /data/brian/Al488-yoyo1-2.oib: [testng] [2024-10-22 02:41:37,948] [pool-1-thread-11] Initializing /data/glen/4205basal106072.oif: [testng] [2024-10-22 02:41:53,354] [pool-1-thread-8] Initializing /data/aryeh/naomi/Brain 2 he1d 1.oif: [testng] [2024-10-22 02:42:15,038] [pool-1-thread-1] Initializing /data/aryeh/061010 plate 1/Image0002_10.oib: [testng] [2024-10-22 02:42:23,314] [pool-1-thread-1] Initializing /data/glen/seqlinestack.oif: [testng] [2024-10-22 02:43:02,252] [pool-1-thread-9] Initializing /data/stefan/YC2_spectrum-405.oib: [testng] [2024-10-22 02:43:06,102] [pool-1-thread-9] Initializing /data/glen/singleseqframe.oib: [testng] [2024-10-22 02:43:09,517] [pool-1-thread-9] Initializing /data/allan/new_30min3_1z2.oib: [testng] [2024-10-22 02:43:13,634] [pool-1-thread-9] Initializing /data/pedro/plv-test.oib: [testng] [2024-10-22 02:43:17,372] [pool-1-thread-9] Initializing /data/glen/LUT issue/60x11.oif: [testng] [2024-10-22 02:45:20,173] [pool-1-thread-3] Initializing /data/glen/ticket-10092/tbn 02-10-12 D7 DT 8300 1.oif: [testng] [2024-10-22 02:47:04,015] [pool-1-thread-5] Initializing /data/brian/Rhodamine-PI-1.oib: [testng] [2024-10-22 02:47:07,885] [pool-1-thread-5] Initializing /data/yoshihito/XY.oib: [testng] [2024-10-22 02:47:10,992] [pool-1-thread-5] Initializing /data/shane/Data Subset/EXX6-10G30%.oib: [testng] [2024-10-22 02:47:14,460] [pool-1-thread-5] Initializing /data/stefan/cytosol_03e.oib: [testng] [2024-10-22 02:47:22,115] [pool-1-thread-5] Initializing /data/dan/EGFR-GFP_ptyr-555 FRET test.oib: [testng] [2024-10-22 02:47:25,916] [pool-1-thread-5] Initializing /data/glen/seqlinestack.oib: [testng] [2024-10-22 02:47:30,796] [pool-1-thread-5] Initializing /data/sten/01.oib: [testng] [2024-10-22 02:47:35,461] [pool-1-thread-5] Initializing /data/public/imagesc-71616/20220824_4492_cord_dapi__iba568_60x.oib: [testng] [2024-10-22 02:47:41,037] [pool-1-thread-5] Initializing /data/johannes/step2.bmp: [testng] [2024-10-22 02:47:43,567] [pool-1-thread-5] Initializing /data/stefan/cytosol_01a.oif: [testng] [2024-10-22 02:49:22,541] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_03.oib: [testng] [2024-10-22 02:49:27,786] [pool-1-thread-7] Initializing /data/brian/CFP-GFP2.oib: [testng] [2024-10-22 02:49:31,570] [pool-1-thread-7] Initializing /data/glen/Null file/test no change.oif: [testng] [2024-10-22 02:49:55,402] [pool-1-thread-7] Initializing /data/brian/CagedATP CaG+FuraR3.oib: [testng] [2024-10-22 02:49:59,230] [pool-1-thread-7] Initializing /data/aryeh/061010 plate 1/Image0002_06.oib: [testng] [2024-10-22 02:50:04,629] [pool-1-thread-7] Initializing /data/glen/singleseqline.oib: [testng] [2024-10-22 02:50:07,800] [pool-1-thread-7] Initializing /data/shane/Data Subset/EXX4-10G40%.oib: [testng] [2024-10-22 02:50:08,276] [pool-1-thread-4] Initializing /data/glen/QuitIJ/4202A2chtest.oib: [testng] [2024-10-22 02:50:11,683] [pool-1-thread-7] Initializing /data/glen/singleseqline.oif: [testng] [2024-10-22 02:50:12,404] [pool-1-thread-4] Initializing /data/glen/LUT issue/UVgreenredfarred.oif: [testng] [2024-10-22 02:50:31,629] [pool-1-thread-12] Initializing /data/aryeh/061010 plate 1/Image0002_05.oib: [testng] [2024-10-22 02:50:36,976] [pool-1-thread-12] Initializing /data/molly/11OCT11.OIF: [testng] [2024-10-22 02:50:57,809] [pool-1-thread-7] Initializing /data/brian/Kaede15.oib: [testng] [2024-10-22 02:50:58,515] [pool-1-thread-4] Initializing /data/tom/zseries-test.oib: [testng] [2024-10-22 02:51:03,682] [pool-1-thread-7] Initializing /data/glen/notsaturated.oif: [testng] [2024-10-22 02:51:06,251] [pool-1-thread-4] Initializing /data/lavinia/NM1-RibB-NeuroD-uninjected.oib: [testng] [2024-10-22 02:51:10,311] [pool-1-thread-4] Initializing /data/johannes/Image0010/Image0010.oif.files/Image0010_Thumb.bmp: [testng] [2024-10-22 02:51:11,570] [pool-1-thread-4] Initializing /data/aryeh/061010 plate 1/Image0002_08.oib: [testng] [2024-10-22 02:51:17,025] [pool-1-thread-4] Initializing /data/glen/LUT issue/Greenredfarred.oif: [testng] 03:19:38,535 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-pool-1-thread-6] [testng] 03:19:38,536 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 03:19:38,537 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-pool-1-thread-6] - File property is set to [target/bio-formats-test-pool-1-thread-6-2024-10-22_03-19-38.log] [testng] 03:19:38,537 |-INFO in ch.qos.logback.core.sift.SiftProcessor@33f3edd - End of configuration. [testng] 04:04:21,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - Processing appender named [logfile-main] [testng] 04:04:21,828 |-INFO in ch.qos.logback.core.model.processor.AppenderModelHandler - About to instantiate appender of type [loci.tests.testng.TimestampedLogFileAppender] [testng] 04:04:21,831 |-INFO in loci.tests.testng.TimestampedLogFileAppender[logfile-main] - File property is set to [target/bio-formats-test-main-2024-10-22_04-04-21.log] [testng] 04:04:21,831 |-INFO in ch.qos.logback.core.sift.SiftProcessor@f116270 - End of configuration. [testng] [testng] =============================================== [testng] Bio-Formats software test suite [testng] Total tests run: 7632, Failures: 0, Skips: 0 [testng] =============================================== [testng] BUILD SUCCESSFUL Total time: 132 minutes 39 seconds Finished: SUCCESS